SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    270201 4tuc:YT (3.6) BS01 rna ? GO:0003735 ... P60490 25352689
    270202 4tuc:YT (3.6) BS02 rna ? GO:0003735 ... P60490 25352689
    270203 4tuc:YU (3.6) BS01 rna ? GO:0000027 ... P60491 25352689
    270204 4tuc:YV (3.6) BS01 rna ? GO:0003723 ... P60492 25352689
    270205 4tuc:YW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25352689
    270206 4tuc:YX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25352689
    270207 4tuc:YY (3.6) BS01 rna ? GO:0003723 ... Q5SHP9 25352689
    270208 4tuc:YZ (3.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25352689
    270209 4tuc:YZ (3.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25352689
    270210 4tud:QB (3.6) BS01 rna ? GO:0003735 ... P80371 25352689
    270211 4tud:QC (3.6) BS01 rna ? GO:0003676 ... P80372 25352689
    270212 4tud:QD (3.6) BS01 rna ? GO:0003723 ... P80373 25352689
    270213 4tud:QD (3.6) BS02 ZN ? GO:0003723 ... P80373 25352689
    270214 4tud:QE (3.6) BS01 rna ? GO:0003723 ... Q5SHQ5 25352689
    270215 4tud:QF (3.6) BS01 rna ? GO:0003735 ... Q5SLP8 25352689
    270216 4tud:QF (3.6) BS02 MG ? GO:0003735 ... Q5SLP8 25352689
    270217 4tud:QG (3.6) BS01 rna ? GO:0000049 ... P17291 25352689
    270218 4tud:QH (3.6) BS01 rna ? GO:0003735 ... P0DOY9 25352689
    270219 4tud:QI (3.6) BS01 rna ? GO:0003723 ... P80374 25352689
    270220 4tud:QI (3.6) BS02 rna ? GO:0003723 ... P80374 25352689
    270221 4tud:QJ (3.6) BS01 rna ? GO:0000049 ... Q5SHN7 25352689
    270222 4tud:QK (3.6) BS01 rna ? GO:0003735 ... P80376 25352689
    270223 4tud:QK (3.6) BS02 MG ? GO:0003735 ... P80376 25352689
    270224 4tud:QL (3.6) BS01 rna ? GO:0000049 ... Q5SHN3 25352689
    270225 4tud:QM (3.6) BS01 rna ? GO:0000049 ... P80377 25352689
    270226 4tud:QM (3.6) BS02 rna ? GO:0000049 ... P80377 25352689
    270227 4tud:QM (3.6) BS03 MG ? GO:0000049 ... P80377 25352689
    270228 4tud:QN (3.6) BS01 rna ? GO:0003735 ... P0DOY6 25352689
    270229 4tud:QN (3.6) BS02 ZN ? GO:0003735 ... P0DOY6 25352689
    270230 4tud:QO (3.6) BS01 rna ? GO:0003735 ... Q5SJ76 25352689
    270231 4tud:QO (3.6) BS02 rna ? GO:0003735 ... Q5SJ76 25352689
    270232 4tud:QP (3.6) BS01 rna ? GO:0003735 ... Q5SJH3 25352689
    270233 4tud:QQ (3.6) BS01 rna ? GO:0003735 ... P0DOY7 25352689
    270234 4tud:QR (3.6) BS01 rna ? GO:0003735 ... Q5SLQ0 25352689
    270235 4tud:QS (3.6) BS01 rna ? GO:0000028 ... Q5SHP2 25352689
    270236 4tud:QT (3.6) BS01 rna ? GO:0003723 ... P80380 25352689
    270237 4tud:R0 (3.6) BS01 rna ? GO:0003735 ... P60493 25352689
    270238 4tud:R0 (3.6) BS02 rna ? GO:0003735 ... P60493 25352689
    270239 4tud:R0 (3.6) BS03 rna ? GO:0003735 ... P60493 25352689
    270240 4tud:R1 (3.6) BS01 rna ? GO:0003735 ... P60494 25352689
    270241 4tud:R2 (3.6) BS01 rna ? GO:0003735 ... Q5SHP6 25352689
    270242 4tud:R3 (3.6) BS01 rna ? GO:0003735 ... Q5SHQ6 25352689
    270243 4tud:R3 (3.6) BS02 rna ? GO:0003735 ... Q5SHQ6 25352689
    270244 4tud:R4 (3.6) BS01 rna ? GO:0003735 ... Q5SJE1 25352689
    270245 4tud:R5 (3.6) BS01 rna ? GO:0003735 ... P80339 25352689
    270246 4tud:R6 (3.6) BS01 rna ? GO:0003735 ... P35871 25352689
    270247 4tud:R7 (3.6) BS01 rna ? GO:0003735 ... P80340 25352689
    270248 4tud:R8 (3.6) BS01 rna ? GO:0003735 ... Q5SKU1 25352689
    270249 4tud:R9 (3.6) BS01 rna ? GO:0003735 ... Q5SHR2 25352689
    270250 4tud:RD (3.6) BS01 rna ? GO:0002181 ... P60405 25352689
    270251 4tud:RD (3.6) BS02 MG ? GO:0002181 ... P60405 25352689
    270252 4tud:RE (3.6) BS01 rna ? GO:0003735 ... Q5SHN8 25352689
    270253 4tud:RF (3.6) BS01 rna ? GO:0003735 ... Q5SHN9 25352689
    270254 4tud:RF (3.6) BS02 MG ? GO:0003735 ... Q5SHN9 25352689
    270255 4tud:RG (3.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25352689
    270256 4tud:RG (3.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25352689
    270257 4tud:RG (3.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25352689
    270258 4tud:RH (3.6) BS01 rna ? GO:0002181 ... P0DOY8 25352689
    270259 4tud:RI (3.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25352689
    270260 4tud:RN (3.6) BS01 rna ? GO:0003729 ... P60488 25352689
    270261 4tud:RO (3.6) BS01 rna ? GO:0003735 ... Q5SHP8 25352689
    270262 4tud:RO (3.6) BS02 rna ? GO:0003735 ... Q5SHP8 25352689
    270263 4tud:RP (3.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25352689
    270264 4tud:RQ (3.6) BS01 rna ? GO:0003735 ... P60489 25352689
    270265 4tud:RQ (3.6) BS02 rna ? GO:0003735 ... P60489 25352689
    270266 4tud:RR (3.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25352689
    270267 4tud:RS (3.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25352689
    270268 4tud:RS (3.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25352689
    270269 4tud:RT (3.6) BS01 rna ? GO:0003735 ... P60490 25352689
    270270 4tud:RT (3.6) BS02 rna ? GO:0003735 ... P60490 25352689
    270271 4tud:RU (3.6) BS01 rna ? GO:0000027 ... P60491 25352689
    270272 4tud:RV (3.6) BS01 rna ? GO:0003723 ... P60492 25352689
    270273 4tud:RW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25352689
    270274 4tud:RX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25352689
    270275 4tud:RY (3.6) BS01 rna ? GO:0003723 ... Q5SHP9 25352689
    270276 4tud:RZ (3.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25352689
    270277 4tud:RZ (3.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25352689
    270278 4tud:XB (3.6) BS01 rna ? GO:0003735 ... P80371 25352689
    270279 4tud:XC (3.6) BS01 rna ? GO:0003676 ... P80372 25352689
    270280 4tud:XD (3.6) BS01 rna ? GO:0003723 ... P80373 25352689
    270281 4tud:XD (3.6) BS02 ZN ? GO:0003723 ... P80373 25352689
    270282 4tud:XE (3.6) BS01 rna ? GO:0003723 ... Q5SHQ5 25352689
    270283 4tud:XF (3.6) BS01 rna ? GO:0003735 ... Q5SLP8 25352689
    270284 4tud:XG (3.6) BS01 rna ? GO:0000049 ... P17291 25352689
    270285 4tud:XH (3.6) BS01 rna ? GO:0003735 ... P0DOY9 25352689
    270286 4tud:XI (3.6) BS01 rna ? GO:0003723 ... P80374 25352689
    270287 4tud:XI (3.6) BS02 rna ? GO:0003723 ... P80374 25352689
    270288 4tud:XJ (3.6) BS01 rna ? GO:0000049 ... Q5SHN7 25352689
    270289 4tud:XK (3.6) BS01 rna ? GO:0003735 ... P80376 25352689
    270290 4tud:XL (3.6) BS01 rna ? GO:0000049 ... Q5SHN3 25352689
    270291 4tud:XM (3.6) BS01 rna ? GO:0000049 ... P80377 25352689
    270292 4tud:XM (3.6) BS02 rna ? GO:0000049 ... P80377 25352689
    270293 4tud:XN (3.6) BS01 rna ? GO:0003735 ... P0DOY6 25352689
    270294 4tud:XN (3.6) BS02 ZN ? GO:0003735 ... P0DOY6 25352689
    270295 4tud:XO (3.6) BS01 rna ? GO:0003735 ... Q5SJ76 25352689
    270296 4tud:XO (3.6) BS02 rna ? GO:0003735 ... Q5SJ76 25352689
    270297 4tud:XP (3.6) BS01 rna ? GO:0003735 ... Q5SJH3 25352689
    270298 4tud:XQ (3.6) BS01 rna ? GO:0003735 ... P0DOY7 25352689
    270299 4tud:XR (3.6) BS01 rna ? GO:0003735 ... Q5SLQ0 25352689
    270300 4tud:XS (3.6) BS01 rna ? GO:0000028 ... Q5SHP2 25352689
    270301 4tud:XT (3.6) BS01 rna ? GO:0003723 ... P80380 25352689
    270302 4tud:Y0 (3.6) BS01 rna ? GO:0003735 ... P60493 25352689
    270303 4tud:Y0 (3.6) BS02 rna ? GO:0003735 ... P60493 25352689
    270304 4tud:Y1 (3.6) BS01 rna ? GO:0003735 ... P60494 25352689
    270305 4tud:Y2 (3.6) BS01 rna ? GO:0003735 ... Q5SHP6 25352689
    270306 4tud:Y3 (3.6) BS01 rna ? GO:0003735 ... Q5SHQ6 25352689
    270307 4tud:Y3 (3.6) BS02 rna ? GO:0003735 ... Q5SHQ6 25352689
    270308 4tud:Y4 (3.6) BS01 rna ? GO:0003735 ... Q5SJE1 25352689
    270309 4tud:Y4 (3.6) BS02 rna ? GO:0003735 ... Q5SJE1 25352689
    270310 4tud:Y5 (3.6) BS01 rna ? GO:0003735 ... P80339 25352689
    270311 4tud:Y6 (3.6) BS01 rna ? GO:0003735 ... P35871 25352689
    270312 4tud:Y7 (3.6) BS01 rna ? GO:0003735 ... P80340 25352689
    270313 4tud:Y8 (3.6) BS01 rna ? GO:0003735 ... Q5SKU1 25352689
    270314 4tud:Y9 (3.6) BS01 rna ? GO:0003735 ... Q5SHR2 25352689
    270315 4tud:YD (3.6) BS01 rna ? GO:0002181 ... P60405 25352689
    270316 4tud:YD (3.6) BS02 MG ? GO:0002181 ... P60405 25352689
    270317 4tud:YE (3.6) BS01 rna ? GO:0003735 ... Q5SHN8 25352689
    270318 4tud:YF (3.6) BS01 rna ? GO:0003735 ... Q5SHN9 25352689
    270319 4tud:YG (3.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25352689
    270320 4tud:YG (3.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25352689
    270321 4tud:YH (3.6) BS01 rna ? GO:0002181 ... P0DOY8 25352689
    270322 4tud:YI (3.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25352689
    270323 4tud:YI (3.6) BS02 rna ? GO:0003735 ... Q5SLQ1 25352689
    270324 4tud:YN (3.6) BS01 rna ? GO:0003729 ... P60488 25352689
    270325 4tud:YO (3.6) BS01 rna ? GO:0003735 ... Q5SHP8 25352689
    270326 4tud:YO (3.6) BS02 rna ? GO:0003735 ... Q5SHP8 25352689
    270327 4tud:YP (3.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25352689
    270328 4tud:YQ (3.6) BS01 rna ? GO:0003735 ... P60489 25352689
    270329 4tud:YQ (3.6) BS02 rna ? GO:0003735 ... P60489 25352689
    270330 4tud:YR (3.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25352689
    270331 4tud:YS (3.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25352689
    270332 4tud:YS (3.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25352689
    270333 4tud:YT (3.6) BS01 rna ? GO:0003735 ... P60490 25352689
    270334 4tud:YT (3.6) BS02 rna ? GO:0003735 ... P60490 25352689
    270335 4tud:YU (3.6) BS01 rna ? GO:0000027 ... P60491 25352689
    270336 4tud:YV (3.6) BS01 rna ? GO:0003723 ... P60492 25352689
    270337 4tud:YW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25352689
    270338 4tud:YX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25352689
    270339 4tud:YY (3.6) BS01 rna ? GO:0003723 ... Q5SHP9 25352689
    270340 4tud:YZ (3.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25352689
    270341 4tud:YZ (3.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25352689
    270342 4tue:QB (3.5) BS01 rna ? GO:0003735 ... P80371 25352689
    270343 4tue:QC (3.5) BS01 rna ? GO:0003676 ... P80372 25352689
    270344 4tue:QD (3.5) BS01 rna ? GO:0003723 ... P80373 25352689
    270345 4tue:QD (3.5) BS02 ZN ? GO:0003723 ... P80373 25352689
    270346 4tue:QE (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 25352689
    270347 4tue:QF (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 25352689
    270348 4tue:QF (3.5) BS02 MG ? GO:0003735 ... Q5SLP8 25352689
    270349 4tue:QG (3.5) BS01 rna ? GO:0000049 ... P17291 25352689
    270350 4tue:QH (3.5) BS01 rna ? GO:0003735 ... P0DOY9 25352689
    270351 4tue:QI (3.5) BS01 rna ? GO:0003723 ... P80374 25352689
    270352 4tue:QI (3.5) BS02 rna ? GO:0003723 ... P80374 25352689
    270353 4tue:QJ (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 25352689
    270354 4tue:QJ (3.5) BS02 rna ? GO:0000049 ... Q5SHN7 25352689
    270355 4tue:QK (3.5) BS01 rna ? GO:0003735 ... P80376 25352689
    270356 4tue:QK (3.5) BS02 MG ? GO:0003735 ... P80376 25352689
    270357 4tue:QL (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 25352689
    270358 4tue:QM (3.5) BS01 rna ? GO:0000049 ... P80377 25352689
    270359 4tue:QM (3.5) BS02 rna ? GO:0000049 ... P80377 25352689
    270360 4tue:QM (3.5) BS03 MG ? GO:0000049 ... P80377 25352689
    270361 4tue:QN (3.5) BS01 rna ? GO:0003735 ... P0DOY6 25352689
    270362 4tue:QN (3.5) BS02 ZN ? GO:0003735 ... P0DOY6 25352689
    270363 4tue:QO (3.5) BS01 rna ? GO:0003735 ... Q5SJ76 25352689
    270364 4tue:QO (3.5) BS02 rna ? GO:0003735 ... Q5SJ76 25352689
    270365 4tue:QP (3.5) BS01 rna ? GO:0003735 ... Q5SJH3 25352689
    270366 4tue:QQ (3.5) BS01 rna ? GO:0003735 ... P0DOY7 25352689
    270367 4tue:QR (3.5) BS01 rna ? GO:0003735 ... Q5SLQ0 25352689
    270368 4tue:QS (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 25352689
    270369 4tue:QT (3.5) BS01 rna ? GO:0003723 ... P80380 25352689
    270370 4tue:R0 (3.5) BS01 rna ? GO:0003735 ... P60493 25352689
    270371 4tue:R0 (3.5) BS02 rna ? GO:0003735 ... P60493 25352689
    270372 4tue:R0 (3.5) BS03 rna ? GO:0003735 ... P60493 25352689
    270373 4tue:R1 (3.5) BS01 rna ? GO:0003735 ... P60494 25352689
    270374 4tue:R2 (3.5) BS01 rna ? GO:0003735 ... Q5SHP6 25352689
    270375 4tue:R3 (3.5) BS01 rna ? GO:0003735 ... Q5SHQ6 25352689
    270376 4tue:R3 (3.5) BS02 rna ? GO:0003735 ... Q5SHQ6 25352689
    270377 4tue:R4 (3.5) BS01 rna ? GO:0003735 ... Q5SJE1 25352689
    270378 4tue:R4 (3.5) BS02 rna ? GO:0003735 ... Q5SJE1 25352689
    270379 4tue:R5 (3.5) BS01 rna ? GO:0003735 ... P80339 25352689
    270380 4tue:R6 (3.5) BS01 rna ? GO:0003735 ... P35871 25352689
    270381 4tue:R7 (3.5) BS01 rna ? GO:0003735 ... P80340 25352689
    270382 4tue:R8 (3.5) BS01 rna ? GO:0003735 ... Q5SKU1 25352689
    270383 4tue:R9 (3.5) BS01 rna ? GO:0003735 ... Q5SHR2 25352689
    270384 4tue:RD (3.5) BS01 rna ? GO:0002181 ... P60405 25352689
    270385 4tue:RD (3.5) BS02 rna ? GO:0002181 ... P60405 25352689
    270386 4tue:RD (3.5) BS03 MG ? GO:0002181 ... P60405 25352689
    270387 4tue:RE (3.5) BS01 rna ? GO:0003735 ... Q5SHN8 25352689
    270388 4tue:RF (3.5) BS01 rna ? GO:0003735 ... Q5SHN9 25352689
    270389 4tue:RF (3.5) BS02 MG ? GO:0003735 ... Q5SHN9 25352689
    270390 4tue:RG (3.5) BS01 rna ? GO:0000049 ... Q5SHQ0 25352689
    270391 4tue:RG (3.5) BS02 rna ? GO:0000049 ... Q5SHQ0 25352689
    270392 4tue:RG (3.5) BS03 rna ? GO:0000049 ... Q5SHQ0 25352689
    270393 4tue:RH (3.5) BS01 rna ? GO:0002181 ... P0DOY8 25352689
    270394 4tue:RI (3.5) BS01 rna ? GO:0003735 ... Q5SLQ1 25352689
    270395 4tue:RN (3.5) BS01 rna ? GO:0003729 ... P60488 25352689
    270396 4tue:RO (3.5) BS01 rna ? GO:0003735 ... Q5SHP8 25352689
    270397 4tue:RO (3.5) BS02 rna ? GO:0003735 ... Q5SHP8 25352689
    270398 4tue:RP (3.5) BS01 rna ? GO:0003735 ... Q5SHQ7 25352689
    270399 4tue:RP (3.5) BS02 MG ? GO:0003735 ... Q5SHQ7 25352689
    270400 4tue:RQ (3.5) BS01 rna ? GO:0003735 ... P60489 25352689

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).