SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    271401 4u1v:B2 (3.0) BS01 rna ? GO:0002181 ... P0A7P5 24957822
    271402 4u1v:B3 (3.0) BS01 rna ? GO:0002181 ... P0A7Q1 24957822
    271403 4u1v:B4 (3.0) BS01 rna ? GO:0002181 ... P0A7Q6 24957822
    271404 4u1v:B4 (3.0) BS02 ZN ? GO:0002181 ... P0A7Q6 24957822
    271405 4u1v:B5 (3.0) BS01 rna ? GO:0003723 ... Q5SLP7 24957822
    271406 4u1v:BC (3.0) BS01 rna ? GO:0000027 ... P60422 24957822
    271407 4u1v:BD (3.0) BS01 rna ? GO:0000027 ... P60438 24957822
    271408 4u1v:BE (3.0) BS01 rna ? GO:0001070 ... P60723 24957822
    271409 4u1v:BF (3.0) BS01 rna ? GO:0000027 ... P62399 24957822
    271410 4u1v:BF (3.0) BS02 rna ? GO:0000027 ... P62399 24957822
    271411 4u1v:BG (3.0) BS01 rna ? GO:0000027 ... P0AG55 24957822
    271412 4u1v:BH (3.0) BS01 rna ? GO:0002181 ... P0A7R1 24957822
    271413 4u1v:BH (3.0) BS02 rna ? GO:0002181 ... P0A7R1 24957822
    271414 4u1v:BI (3.0) BS01 rna ? GO:0000027 ... P0A7J7 24957822
    271415 4u1v:BJ (3.0) BS01 rna ? GO:0002181 ... P0AA10 24957822
    271416 4u1v:BK (3.0) BS01 rna ? GO:0002181 ... P0ADY3 24957822
    271417 4u1v:BK (3.0) BS02 rna ? GO:0002181 ... P0ADY3 24957822
    271418 4u1v:BL (3.0) BS01 rna ? GO:0002181 ... P02413 24957822
    271419 4u1v:BM (3.0) BS01 rna ? GO:0000027 ... P0ADY7 24957822
    271420 4u1v:BM (3.0) BS02 rna ? GO:0000027 ... P0ADY7 24957822
    271421 4u1v:BN (3.0) BS01 rna ? GO:0000027 ... P0AG44 24957822
    271422 4u1v:BO (3.0) BS01 rna ? GO:0002181 ... P0C018 24957822
    271423 4u1v:BO (3.0) BS02 rna ? GO:0002181 ... P0C018 24957822
    271424 4u1v:BP (3.0) BS01 rna ? GO:0000027 ... P0A7K6 24957822
    271425 4u1v:BP (3.0) BS02 rna ? GO:0000027 ... P0A7K6 24957822
    271426 4u1v:BQ (3.0) BS01 rna ? GO:0000027 ... P0A7L3 24957822
    271427 4u1v:BR (3.0) BS01 rna ? GO:0002181 ... P0AG48 24957822
    271428 4u1v:BS (3.0) BS01 rna ? GO:0002181 ... P61175 24957822
    271429 4u1v:BT (3.0) BS01 rna ? GO:0000027 ... P0ADZ0 24957822
    271430 4u1v:BU (3.0) BS01 rna ? GO:0000027 ... P60624 24957822
    271431 4u1v:BV (3.0) BS01 rna ? GO:0000027 ... P68919 24957822
    271432 4u1v:BV (3.0) BS02 rna ? GO:0000027 ... P68919 24957822
    271433 4u1v:BW (3.0) BS01 rna ? GO:0003735 ... P0A7L8 24957822
    271434 4u1v:BW (3.0) BS02 rna ? GO:0003735 ... P0A7L8 24957822
    271435 4u1v:BX (3.0) BS01 rna ? GO:0000027 ... P0A7M2 24957822
    271436 4u1v:BY (3.0) BS01 rna ? GO:0000027 ... P0A7M6 24957822
    271437 4u1v:BZ (3.0) BS01 rna ? GO:0000027 ... P0AG51 24957822
    271438 4u1v:BZ (3.0) BS02 rna ? GO:0000027 ... P0AG51 24957822
    271439 4u1v:CB (3.0) BS01 rna ? GO:0000028 ... P0A7V0 24957822
    271440 4u1v:CB (3.0) BS02 rna ? GO:0000028 ... P0A7V0 24957822
    271441 4u1v:CC (3.0) BS01 rna ? GO:0003676 ... P0A7V3 24957822
    271442 4u1v:CD (3.0) BS01 rna ? GO:0000028 ... P0A7V8 24957822
    271443 4u1v:CD (3.0) BS02 rna ? GO:0000028 ... P0A7V8 24957822
    271444 4u1v:CE (3.0) BS01 rna ? GO:0000028 ... P0A7W1 24957822
    271445 4u1v:CF (3.0) BS01 rna ? GO:0003735 ... P02358 24957822
    271446 4u1v:CG (3.0) BS01 rna ? GO:0003723 ... P02359 24957822
    271447 4u1v:CH (3.0) BS01 rna ? GO:0000028 ... P0A7W7 24957822
    271448 4u1v:CI (3.0) BS01 rna ? GO:0002181 ... P0A7X3 24957822
    271449 4u1v:CJ (3.0) BS01 rna ? GO:0000049 ... P0A7R5 24957822
    271450 4u1v:CK (3.0) BS01 rna ? GO:0002181 ... P0A7R9 24957822
    271451 4u1v:CL (3.0) BS01 rna ? GO:0000049 ... P0A7S3 24957822
    271452 4u1v:CM (3.0) BS01 rna ? GO:0000049 ... P0A7S9 24957822
    271453 4u1v:CN (3.0) BS01 rna ? GO:0000028 ... P0AG59 24957822
    271454 4u1v:CO (3.0) BS01 rna ? GO:0000028 ... P0ADZ4 24957822
    271455 4u1v:CO (3.0) BS02 rna ? GO:0000028 ... P0ADZ4 24957822
    271456 4u1v:CP (3.0) BS01 rna ? GO:0000028 ... P0A7T3 24957822
    271457 4u1v:CQ (3.0) BS01 rna ? GO:0000028 ... P0AG63 24957822
    271458 4u1v:CR (3.0) BS01 rna ? GO:0003735 ... P0A7T7 24957822
    271459 4u1v:CS (3.0) BS01 rna ? GO:0003723 ... P0A7U3 24957822
    271460 4u1v:CT (3.0) BS01 rna ? GO:0000028 ... P0A7U7 24957822
    271461 4u1v:CU (3.0) BS01 rna ? GO:0003735 ... P68679 24957822
    271462 4u1v:D0 (3.0) BS01 rna ? GO:0000027 ... P0A7N4 24957822
    271463 4u1v:D1 (3.0) BS01 rna ? GO:0000027 ... P0A7N9 24957822
    271464 4u1v:D2 (3.0) BS01 rna ? GO:0002181 ... P0A7P5 24957822
    271465 4u1v:D3 (3.0) BS01 rna ? GO:0002181 ... P0A7Q1 24957822
    271466 4u1v:D4 (3.0) BS01 rna ? GO:0002181 ... P0A7Q6 24957822
    271467 4u1v:DC (3.0) BS01 rna ? GO:0000027 ... P60422 24957822
    271468 4u1v:DD (3.0) BS01 rna ? GO:0000027 ... P60438 24957822
    271469 4u1v:DE (3.0) BS01 rna ? GO:0001070 ... P60723 24957822
    271470 4u1v:DF (3.0) BS01 rna ? GO:0000027 ... P62399 24957822
    271471 4u1v:DF (3.0) BS02 rna ? GO:0000027 ... P62399 24957822
    271472 4u1v:DG (3.0) BS01 rna ? GO:0000027 ... P0AG55 24957822
    271473 4u1v:DH (3.0) BS01 rna ? GO:0002181 ... P0A7R1 24957822
    271474 4u1v:DI (3.0) BS01 rna ? GO:0000027 ... P0A7J7 24957822
    271475 4u1v:DJ (3.0) BS01 rna ? GO:0002181 ... P0AA10 24957822
    271476 4u1v:DK (3.0) BS01 rna ? GO:0002181 ... P0ADY3 24957822
    271477 4u1v:DL (3.0) BS01 rna ? GO:0002181 ... P02413 24957822
    271478 4u1v:DM (3.0) BS01 rna ? GO:0000027 ... P0ADY7 24957822
    271479 4u1v:DM (3.0) BS02 rna ? GO:0000027 ... P0ADY7 24957822
    271480 4u1v:DN (3.0) BS01 rna ? GO:0000027 ... P0AG44 24957822
    271481 4u1v:DO (3.0) BS01 rna ? GO:0002181 ... P0C018 24957822
    271482 4u1v:DO (3.0) BS02 rna ? GO:0002181 ... P0C018 24957822
    271483 4u1v:DP (3.0) BS01 rna ? GO:0000027 ... P0A7K6 24957822
    271484 4u1v:DP (3.0) BS02 rna ? GO:0000027 ... P0A7K6 24957822
    271485 4u1v:DQ (3.0) BS01 rna ? GO:0000027 ... P0A7L3 24957822
    271486 4u1v:DR (3.0) BS01 rna ? GO:0002181 ... P0AG48 24957822
    271487 4u1v:DS (3.0) BS01 rna ? GO:0002181 ... P61175 24957822
    271488 4u1v:DT (3.0) BS01 rna ? GO:0000027 ... P0ADZ0 24957822
    271489 4u1v:DU (3.0) BS01 rna ? GO:0000027 ... P60624 24957822
    271490 4u1v:DV (3.0) BS01 rna ? GO:0000027 ... P68919 24957822
    271491 4u1v:DV (3.0) BS02 rna ? GO:0000027 ... P68919 24957822
    271492 4u1v:DW (3.0) BS01 rna ? GO:0003735 ... P0A7L8 24957822
    271493 4u1v:DW (3.0) BS02 rna ? GO:0003735 ... P0A7L8 24957822
    271494 4u1v:DX (3.0) BS01 rna ? GO:0000027 ... P0A7M2 24957822
    271495 4u1v:DY (3.0) BS01 rna ? GO:0000027 ... P0A7M6 24957822
    271496 4u1v:DZ (3.0) BS01 rna ? GO:0000027 ... P0AG51 24957822
    271497 4u1v:DZ (3.0) BS02 rna ? GO:0000027 ... P0AG51 24957822
    271498 4u1w:A (3.25) BS01 FWF ? GO:0000149 ... P19491 25109876
    271499 4u1w:B (3.25) BS01 FWF ? GO:0000149 ... P19491 25109876
    271500 4u1w:C (3.25) BS01 FWF ? GO:0000149 ... P19491 25109876
    271501 4u1w:D (3.25) BS01 FWF ? GO:0000149 ... P19491 25109876
    271502 4u1x:A (3.301) BS01 FWF ? GO:0000149 ... P19491 25109876
    271503 4u1x:B (3.301) BS01 FWF ? GO:0000149 ... P19491 25109876
    271504 4u1x:C (3.301) BS01 FWF ? GO:0000149 ... P19491 25109876
    271505 4u1x:D (3.301) BS01 FWF ? GO:0000149 ... P19491 25109876
    271506 4u1y:A (3.8999) BS01 FWD ? GO:0000149 ... P19491 25109876 BindingDB: Ki=4nM, EC50=460nM
    271507 4u1y:A (3.8999) BS02 FWF ? GO:0000149 ... P19491 25109876
    271508 4u1y:B (3.8999) BS01 FWD ? GO:0000149 ... P19491 25109876 BindingDB: Ki=4nM, EC50=460nM
    271509 4u1y:B (3.8999) BS02 FWF ? GO:0000149 ... P19491 25109876
    271510 4u1y:C (3.8999) BS01 FWF ? GO:0000149 ... P19491 25109876
    271511 4u1y:C (3.8999) BS02 FWD ? GO:0000149 ... P19491 25109876 BindingDB: Ki=4nM, EC50=460nM
    271512 4u1y:D (3.8999) BS01 FWF ? GO:0000149 ... P19491 25109876
    271513 4u1y:D (3.8999) BS02 FWD ? GO:0000149 ... P19491 25109876 BindingDB: Ki=4nM, EC50=460nM
    271514 4u1z:A (1.9401) BS01 FWF ? GO:0015276 ... P19491 25109876
    271515 4u20:AB (2.9) BS01 rna ? GO:0000028 ... P0A7V0 24957822
    271516 4u20:AC (2.9) BS01 rna ? GO:0003676 ... P0A7V3 24957822
    271517 4u20:AD (2.9) BS01 rna ? GO:0000028 ... P0A7V8 24957822
    271518 4u20:AE (2.9) BS01 rna ? GO:0000028 ... P0A7W1 24957822
    271519 4u20:AF (2.9) BS01 rna ? GO:0003735 ... P02358 24957822
    271520 4u20:AG (2.9) BS01 rna ? GO:0003723 ... P02359 24957822
    271521 4u20:AH (2.9) BS01 rna ? GO:0000028 ... P0A7W7 24957822
    271522 4u20:AI (2.9) BS01 rna ? GO:0002181 ... P0A7X3 24957822
    271523 4u20:AJ (2.9) BS01 rna ? GO:0000049 ... P0A7R5 24957822
    271524 4u20:AK (2.9) BS01 rna ? GO:0002181 ... P0A7R9 24957822
    271525 4u20:AK (2.9) BS02 rna ? GO:0002181 ... P0A7R9 24957822
    271526 4u20:AL (2.9) BS01 rna ? GO:0000049 ... P0A7S3 24957822
    271527 4u20:AM (2.9) BS01 rna ? GO:0000049 ... P0A7S9 24957822
    271528 4u20:AN (2.9) BS01 rna ? GO:0000028 ... P0AG59 24957822
    271529 4u20:AO (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 24957822
    271530 4u20:AP (2.9) BS01 rna ? GO:0000028 ... P0A7T3 24957822
    271531 4u20:AQ (2.9) BS01 rna ? GO:0000028 ... P0AG63 24957822
    271532 4u20:AR (2.9) BS01 rna ? GO:0003735 ... P0A7T7 24957822
    271533 4u20:AS (2.9) BS01 rna ? GO:0003723 ... P0A7U3 24957822
    271534 4u20:AT (2.9) BS01 rna ? GO:0000028 ... P0A7U7 24957822
    271535 4u20:AU (2.9) BS01 rna ? GO:0003735 ... P68679 24957822
    271536 4u20:B0 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 24957822
    271537 4u20:B1 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 24957822
    271538 4u20:B2 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 24957822
    271539 4u20:B3 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 24957822
    271540 4u20:B4 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 24957822
    271541 4u20:B4 (2.9) BS02 ZN ? GO:0002181 ... P0A7Q6 24957822
    271542 4u20:B5 (2.9) BS01 rna ? GO:0003723 ... Q5SLP7 24957822
    271543 4u20:BC (2.9) BS01 rna ? GO:0000027 ... P60422 24957822
    271544 4u20:BD (2.9) BS01 rna ? GO:0000027 ... P60438 24957822
    271545 4u20:BE (2.9) BS01 rna ? GO:0001070 ... P60723 24957822
    271546 4u20:BF (2.9) BS01 rna ? GO:0000027 ... P62399 24957822
    271547 4u20:BF (2.9) BS02 rna ? GO:0000027 ... P62399 24957822
    271548 4u20:BG (2.9) BS01 rna ? GO:0000027 ... P0AG55 24957822
    271549 4u20:BH (2.9) BS01 rna ? GO:0002181 ... P0A7R1 24957822
    271550 4u20:BH (2.9) BS02 rna ? GO:0002181 ... P0A7R1 24957822
    271551 4u20:BI (2.9) BS01 rna ? GO:0000027 ... P0A7J7 24957822
    271552 4u20:BJ (2.9) BS01 rna ? GO:0002181 ... P0AA10 24957822
    271553 4u20:BK (2.9) BS01 rna ? GO:0002181 ... P0ADY3 24957822
    271554 4u20:BK (2.9) BS02 rna ? GO:0002181 ... P0ADY3 24957822
    271555 4u20:BL (2.9) BS01 rna ? GO:0002181 ... P02413 24957822
    271556 4u20:BM (2.9) BS01 rna ? GO:0000027 ... P0ADY7 24957822
    271557 4u20:BM (2.9) BS02 rna ? GO:0000027 ... P0ADY7 24957822
    271558 4u20:BN (2.9) BS01 rna ? GO:0000027 ... P0AG44 24957822
    271559 4u20:BO (2.9) BS01 rna ? GO:0002181 ... P0C018 24957822
    271560 4u20:BO (2.9) BS02 rna ? GO:0002181 ... P0C018 24957822
    271561 4u20:BP (2.9) BS01 rna ? GO:0000027 ... P0A7K6 24957822
    271562 4u20:BP (2.9) BS02 rna ? GO:0000027 ... P0A7K6 24957822
    271563 4u20:BQ (2.9) BS01 rna ? GO:0000027 ... P0A7L3 24957822
    271564 4u20:BR (2.9) BS01 rna ? GO:0002181 ... P0AG48 24957822
    271565 4u20:BS (2.9) BS01 rna ? GO:0002181 ... P61175 24957822
    271566 4u20:BT (2.9) BS01 rna ? GO:0000027 ... P0ADZ0 24957822
    271567 4u20:BU (2.9) BS01 rna ? GO:0000027 ... P60624 24957822
    271568 4u20:BV (2.9) BS01 rna ? GO:0000027 ... P68919 24957822
    271569 4u20:BV (2.9) BS02 rna ? GO:0000027 ... P68919 24957822
    271570 4u20:BW (2.9) BS01 rna ? GO:0003735 ... P0A7L8 24957822
    271571 4u20:BW (2.9) BS02 rna ? GO:0003735 ... P0A7L8 24957822
    271572 4u20:BX (2.9) BS01 rna ? GO:0000027 ... P0A7M2 24957822
    271573 4u20:BY (2.9) BS01 rna ? GO:0000027 ... P0A7M6 24957822
    271574 4u20:BZ (2.9) BS01 rna ? GO:0000027 ... P0AG51 24957822
    271575 4u20:CB (2.9) BS01 rna ? GO:0000028 ... P0A7V0 24957822
    271576 4u20:CB (2.9) BS02 rna ? GO:0000028 ... P0A7V0 24957822
    271577 4u20:CC (2.9) BS01 rna ? GO:0003676 ... P0A7V3 24957822
    271578 4u20:CD (2.9) BS01 rna ? GO:0000028 ... P0A7V8 24957822
    271579 4u20:CD (2.9) BS02 rna ? GO:0000028 ... P0A7V8 24957822
    271580 4u20:CE (2.9) BS01 rna ? GO:0000028 ... P0A7W1 24957822
    271581 4u20:CF (2.9) BS01 rna ? GO:0003735 ... P02358 24957822
    271582 4u20:CG (2.9) BS01 rna ? GO:0003723 ... P02359 24957822
    271583 4u20:CH (2.9) BS01 rna ? GO:0000028 ... P0A7W7 24957822
    271584 4u20:CI (2.9) BS01 rna ? GO:0002181 ... P0A7X3 24957822
    271585 4u20:CJ (2.9) BS01 rna ? GO:0000049 ... P0A7R5 24957822
    271586 4u20:CK (2.9) BS01 rna ? GO:0002181 ... P0A7R9 24957822
    271587 4u20:CL (2.9) BS01 rna ? GO:0000049 ... P0A7S3 24957822
    271588 4u20:CM (2.9) BS01 rna ? GO:0000049 ... P0A7S9 24957822
    271589 4u20:CN (2.9) BS01 rna ? GO:0000028 ... P0AG59 24957822
    271590 4u20:CO (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 24957822
    271591 4u20:CO (2.9) BS02 rna ? GO:0000028 ... P0ADZ4 24957822
    271592 4u20:CP (2.9) BS01 rna ? GO:0000028 ... P0A7T3 24957822
    271593 4u20:CQ (2.9) BS01 rna ? GO:0000028 ... P0AG63 24957822
    271594 4u20:CR (2.9) BS01 rna ? GO:0003735 ... P0A7T7 24957822
    271595 4u20:CS (2.9) BS01 rna ? GO:0003723 ... P0A7U3 24957822
    271596 4u20:CT (2.9) BS01 rna ? GO:0000028 ... P0A7U7 24957822
    271597 4u20:CU (2.9) BS01 rna ? GO:0003735 ... P68679 24957822
    271598 4u20:D0 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 24957822
    271599 4u20:D1 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 24957822
    271600 4u20:D2 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 24957822

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).