SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    271801 4u25:BH (2.9) BS02 rna ? GO:0002181 ... P0A7R1 24957822
    271802 4u25:BI (2.9) BS01 rna ? GO:0000027 ... P0A7J7 24957822
    271803 4u25:BJ (2.9) BS01 rna ? GO:0002181 ... P0AA10 24957822
    271804 4u25:BK (2.9) BS01 rna ? GO:0002181 ... P0ADY3 24957822
    271805 4u25:BK (2.9) BS02 rna ? GO:0002181 ... P0ADY3 24957822
    271806 4u25:BL (2.9) BS01 rna ? GO:0002181 ... P02413 24957822
    271807 4u25:BM (2.9) BS01 rna ? GO:0000027 ... P0ADY7 24957822
    271808 4u25:BM (2.9) BS02 rna ? GO:0000027 ... P0ADY7 24957822
    271809 4u25:BN (2.9) BS01 rna ? GO:0000027 ... P0AG44 24957822
    271810 4u25:BO (2.9) BS01 rna ? GO:0002181 ... P0C018 24957822
    271811 4u25:BO (2.9) BS02 rna ? GO:0002181 ... P0C018 24957822
    271812 4u25:BP (2.9) BS01 rna ? GO:0000027 ... P0A7K6 24957822
    271813 4u25:BP (2.9) BS02 rna ? GO:0000027 ... P0A7K6 24957822
    271814 4u25:BQ (2.9) BS01 rna ? GO:0000027 ... P0A7L3 24957822
    271815 4u25:BR (2.9) BS01 rna ? GO:0002181 ... P0AG48 24957822
    271816 4u25:BS (2.9) BS01 rna ? GO:0002181 ... P61175 24957822
    271817 4u25:BT (2.9) BS01 rna ? GO:0000027 ... P0ADZ0 24957822
    271818 4u25:BU (2.9) BS01 rna ? GO:0000027 ... P60624 24957822
    271819 4u25:BV (2.9) BS01 rna ? GO:0000027 ... P68919 24957822
    271820 4u25:BV (2.9) BS02 rna ? GO:0000027 ... P68919 24957822
    271821 4u25:BW (2.9) BS01 rna ? GO:0003735 ... P0A7L8 24957822
    271822 4u25:BW (2.9) BS02 rna ? GO:0003735 ... P0A7L8 24957822
    271823 4u25:BX (2.9) BS01 rna ? GO:0000027 ... P0A7M2 24957822
    271824 4u25:BY (2.9) BS01 rna ? GO:0000027 ... P0A7M6 24957822
    271825 4u25:BZ (2.9) BS01 rna ? GO:0000027 ... P0AG51 24957822
    271826 4u25:BZ (2.9) BS02 rna ? GO:0000027 ... P0AG51 24957822
    271827 4u25:CB (2.9) BS01 rna ? GO:0000028 ... P0A7V0 24957822
    271828 4u25:CB (2.9) BS02 rna ? GO:0000028 ... P0A7V0 24957822
    271829 4u25:CC (2.9) BS01 rna ? GO:0003676 ... P0A7V3 24957822
    271830 4u25:CD (2.9) BS01 rna ? GO:0000028 ... P0A7V8 24957822
    271831 4u25:CD (2.9) BS02 rna ? GO:0000028 ... P0A7V8 24957822
    271832 4u25:CE (2.9) BS01 rna ? GO:0000028 ... P0A7W1 24957822
    271833 4u25:CF (2.9) BS01 rna ? GO:0003735 ... P02358 24957822
    271834 4u25:CG (2.9) BS01 rna ? GO:0003723 ... P02359 24957822
    271835 4u25:CH (2.9) BS01 rna ? GO:0000028 ... P0A7W7 24957822
    271836 4u25:CI (2.9) BS01 rna ? GO:0002181 ... P0A7X3 24957822
    271837 4u25:CJ (2.9) BS01 rna ? GO:0000049 ... P0A7R5 24957822
    271838 4u25:CK (2.9) BS01 rna ? GO:0002181 ... P0A7R9 24957822
    271839 4u25:CL (2.9) BS01 rna ? GO:0000049 ... P0A7S3 24957822
    271840 4u25:CM (2.9) BS01 rna ? GO:0000049 ... P0A7S9 24957822
    271841 4u25:CN (2.9) BS01 rna ? GO:0000028 ... P0AG59 24957822
    271842 4u25:CO (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 24957822
    271843 4u25:CO (2.9) BS02 rna ? GO:0000028 ... P0ADZ4 24957822
    271844 4u25:CP (2.9) BS01 rna ? GO:0000028 ... P0A7T3 24957822
    271845 4u25:CQ (2.9) BS01 rna ? GO:0000028 ... P0AG63 24957822
    271846 4u25:CR (2.9) BS01 rna ? GO:0003735 ... P0A7T7 24957822
    271847 4u25:CS (2.9) BS01 rna ? GO:0003723 ... P0A7U3 24957822
    271848 4u25:CT (2.9) BS01 rna ? GO:0000028 ... P0A7U7 24957822
    271849 4u25:CU (2.9) BS01 rna ? GO:0003735 ... P68679 24957822
    271850 4u25:D0 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 24957822
    271851 4u25:D1 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 24957822
    271852 4u25:D2 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 24957822
    271853 4u25:D3 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 24957822
    271854 4u25:D4 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 24957822
    271855 4u25:DC (2.9) BS01 rna ? GO:0000027 ... P60422 24957822
    271856 4u25:DD (2.9) BS01 rna ? GO:0000027 ... P60438 24957822
    271857 4u25:DE (2.9) BS01 rna ? GO:0001070 ... P60723 24957822
    271858 4u25:DF (2.9) BS01 rna ? GO:0000027 ... P62399 24957822
    271859 4u25:DF (2.9) BS02 rna ? GO:0000027 ... P62399 24957822
    271860 4u25:DG (2.9) BS01 rna ? GO:0000027 ... P0AG55 24957822
    271861 4u25:DH (2.9) BS01 rna ? GO:0002181 ... P0A7R1 24957822
    271862 4u25:DI (2.9) BS01 rna ? GO:0000027 ... P0A7J7 24957822
    271863 4u25:DJ (2.9) BS01 rna ? GO:0002181 ... P0AA10 24957822
    271864 4u25:DK (2.9) BS01 rna ? GO:0002181 ... P0ADY3 24957822
    271865 4u25:DL (2.9) BS01 rna ? GO:0002181 ... P02413 24957822
    271866 4u25:DM (2.9) BS01 rna ? GO:0000027 ... P0ADY7 24957822
    271867 4u25:DM (2.9) BS02 rna ? GO:0000027 ... P0ADY7 24957822
    271868 4u25:DN (2.9) BS01 rna ? GO:0000027 ... P0AG44 24957822
    271869 4u25:DO (2.9) BS01 rna ? GO:0002181 ... P0C018 24957822
    271870 4u25:DO (2.9) BS02 rna ? GO:0002181 ... P0C018 24957822
    271871 4u25:DP (2.9) BS01 rna ? GO:0000027 ... P0A7K6 24957822
    271872 4u25:DP (2.9) BS02 rna ? GO:0000027 ... P0A7K6 24957822
    271873 4u25:DQ (2.9) BS01 rna ? GO:0000027 ... P0A7L3 24957822
    271874 4u25:DR (2.9) BS01 rna ? GO:0002181 ... P0AG48 24957822
    271875 4u25:DS (2.9) BS01 rna ? GO:0002181 ... P61175 24957822
    271876 4u25:DT (2.9) BS01 rna ? GO:0000027 ... P0ADZ0 24957822
    271877 4u25:DU (2.9) BS01 rna ? GO:0000027 ... P60624 24957822
    271878 4u25:DV (2.9) BS01 rna ? GO:0000027 ... P68919 24957822
    271879 4u25:DV (2.9) BS02 rna ? GO:0000027 ... P68919 24957822
    271880 4u25:DW (2.9) BS01 rna ? GO:0003735 ... P0A7L8 24957822
    271881 4u25:DW (2.9) BS02 rna ? GO:0003735 ... P0A7L8 24957822
    271882 4u25:DX (2.9) BS01 rna ? GO:0000027 ... P0A7M2 24957822
    271883 4u25:DY (2.9) BS01 rna ? GO:0000027 ... P0A7M6 24957822
    271884 4u25:DZ (2.9) BS01 rna ? GO:0000027 ... P0AG51 24957822
    271885 4u26:AB (2.8) BS01 rna ? GO:0000028 ... P0A7V0 24957822
    271886 4u26:AC (2.8) BS01 rna ? GO:0003676 ... P0A7V3 24957822
    271887 4u26:AD (2.8) BS01 rna ? GO:0000028 ... P0A7V8 24957822
    271888 4u26:AE (2.8) BS01 rna ? GO:0000028 ... P0A7W1 24957822
    271889 4u26:AF (2.8) BS01 rna ? GO:0003735 ... P02358 24957822
    271890 4u26:AG (2.8) BS01 rna ? GO:0003723 ... P02359 24957822
    271891 4u26:AH (2.8) BS01 rna ? GO:0000028 ... P0A7W7 24957822
    271892 4u26:AI (2.8) BS01 rna ? GO:0002181 ... P0A7X3 24957822
    271893 4u26:AJ (2.8) BS01 rna ? GO:0000049 ... P0A7R5 24957822
    271894 4u26:AK (2.8) BS01 rna ? GO:0002181 ... P0A7R9 24957822
    271895 4u26:AK (2.8) BS02 rna ? GO:0002181 ... P0A7R9 24957822
    271896 4u26:AL (2.8) BS01 rna ? GO:0000049 ... P0A7S3 24957822
    271897 4u26:AM (2.8) BS01 rna ? GO:0000049 ... P0A7S9 24957822
    271898 4u26:AN (2.8) BS01 rna ? GO:0000028 ... P0AG59 24957822
    271899 4u26:AO (2.8) BS01 rna ? GO:0000028 ... P0ADZ4 24957822
    271900 4u26:AO (2.8) BS02 rna ? GO:0000028 ... P0ADZ4 24957822
    271901 4u26:AP (2.8) BS01 rna ? GO:0000028 ... P0A7T3 24957822
    271902 4u26:AQ (2.8) BS01 rna ? GO:0000028 ... P0AG63 24957822
    271903 4u26:AR (2.8) BS01 rna ? GO:0003735 ... P0A7T7 24957822
    271904 4u26:AS (2.8) BS01 rna ? GO:0003723 ... P0A7U3 24957822
    271905 4u26:AT (2.8) BS01 rna ? GO:0000028 ... P0A7U7 24957822
    271906 4u26:AU (2.8) BS01 rna ? GO:0003735 ... P68679 24957822
    271907 4u26:B0 (2.8) BS01 rna ? GO:0000027 ... P0A7N4 24957822
    271908 4u26:B1 (2.8) BS01 rna ? GO:0000027 ... P0A7N9 24957822
    271909 4u26:B2 (2.8) BS01 rna ? GO:0002181 ... P0A7P5 24957822
    271910 4u26:B3 (2.8) BS01 rna ? GO:0002181 ... P0A7Q1 24957822
    271911 4u26:B4 (2.8) BS01 rna ? GO:0002181 ... P0A7Q6 24957822
    271912 4u26:B4 (2.8) BS02 ZN ? GO:0002181 ... P0A7Q6 24957822
    271913 4u26:B5 (2.8) BS01 rna ? GO:0003723 ... Q5SLP7 24957822
    271914 4u26:BC (2.8) BS01 rna ? GO:0000027 ... P60422 24957822
    271915 4u26:BC (2.8) BS02 MG ? GO:0000027 ... P60422 24957822
    271916 4u26:BD (2.8) BS01 rna ? GO:0000027 ... P60438 24957822
    271917 4u26:BE (2.8) BS01 rna ? GO:0001070 ... P60723 24957822
    271918 4u26:BF (2.8) BS01 rna ? GO:0000027 ... P62399 24957822
    271919 4u26:BF (2.8) BS02 rna ? GO:0000027 ... P62399 24957822
    271920 4u26:BG (2.8) BS01 rna ? GO:0000027 ... P0AG55 24957822
    271921 4u26:BH (2.8) BS01 rna ? GO:0002181 ... P0A7R1 24957822
    271922 4u26:BH (2.8) BS02 rna ? GO:0002181 ... P0A7R1 24957822
    271923 4u26:BI (2.8) BS01 rna ? GO:0000027 ... P0A7J7 24957822
    271924 4u26:BJ (2.8) BS01 rna ? GO:0002181 ... P0AA10 24957822
    271925 4u26:BK (2.8) BS01 rna ? GO:0002181 ... P0ADY3 24957822
    271926 4u26:BK (2.8) BS02 rna ? GO:0002181 ... P0ADY3 24957822
    271927 4u26:BL (2.8) BS01 rna ? GO:0002181 ... P02413 24957822
    271928 4u26:BM (2.8) BS01 rna ? GO:0000027 ... P0ADY7 24957822
    271929 4u26:BM (2.8) BS02 rna ? GO:0000027 ... P0ADY7 24957822
    271930 4u26:BN (2.8) BS01 rna ? GO:0000027 ... P0AG44 24957822
    271931 4u26:BO (2.8) BS01 rna ? GO:0002181 ... P0C018 24957822
    271932 4u26:BO (2.8) BS02 rna ? GO:0002181 ... P0C018 24957822
    271933 4u26:BP (2.8) BS01 rna ? GO:0000027 ... P0A7K6 24957822
    271934 4u26:BP (2.8) BS02 rna ? GO:0000027 ... P0A7K6 24957822
    271935 4u26:BQ (2.8) BS01 rna ? GO:0000027 ... P0A7L3 24957822
    271936 4u26:BR (2.8) BS01 rna ? GO:0002181 ... P0AG48 24957822
    271937 4u26:BS (2.8) BS01 rna ? GO:0002181 ... P61175 24957822
    271938 4u26:BT (2.8) BS01 rna ? GO:0000027 ... P0ADZ0 24957822
    271939 4u26:BU (2.8) BS01 rna ? GO:0000027 ... P60624 24957822
    271940 4u26:BV (2.8) BS01 rna ? GO:0000027 ... P68919 24957822
    271941 4u26:BV (2.8) BS02 rna ? GO:0000027 ... P68919 24957822
    271942 4u26:BW (2.8) BS01 rna ? GO:0003735 ... P0A7L8 24957822
    271943 4u26:BW (2.8) BS02 rna ? GO:0003735 ... P0A7L8 24957822
    271944 4u26:BX (2.8) BS01 rna ? GO:0000027 ... P0A7M2 24957822
    271945 4u26:BY (2.8) BS01 rna ? GO:0000027 ... P0A7M6 24957822
    271946 4u26:BZ (2.8) BS01 rna ? GO:0000027 ... P0AG51 24957822
    271947 4u26:CB (2.8) BS01 rna ? GO:0000028 ... P0A7V0 24957822
    271948 4u26:CB (2.8) BS02 rna ? GO:0000028 ... P0A7V0 24957822
    271949 4u26:CC (2.8) BS01 rna ? GO:0003676 ... P0A7V3 24957822
    271950 4u26:CD (2.8) BS01 rna ? GO:0000028 ... P0A7V8 24957822
    271951 4u26:CD (2.8) BS02 rna ? GO:0000028 ... P0A7V8 24957822
    271952 4u26:CE (2.8) BS01 rna ? GO:0000028 ... P0A7W1 24957822
    271953 4u26:CF (2.8) BS01 rna ? GO:0003735 ... P02358 24957822
    271954 4u26:CG (2.8) BS01 rna ? GO:0003723 ... P02359 24957822
    271955 4u26:CH (2.8) BS01 rna ? GO:0000028 ... P0A7W7 24957822
    271956 4u26:CI (2.8) BS01 rna ? GO:0002181 ... P0A7X3 24957822
    271957 4u26:CJ (2.8) BS01 rna ? GO:0000049 ... P0A7R5 24957822
    271958 4u26:CK (2.8) BS01 rna ? GO:0002181 ... P0A7R9 24957822
    271959 4u26:CL (2.8) BS01 rna ? GO:0000049 ... P0A7S3 24957822
    271960 4u26:CM (2.8) BS01 rna ? GO:0000049 ... P0A7S9 24957822
    271961 4u26:CN (2.8) BS01 rna ? GO:0000028 ... P0AG59 24957822
    271962 4u26:CO (2.8) BS01 rna ? GO:0000028 ... P0ADZ4 24957822
    271963 4u26:CO (2.8) BS02 rna ? GO:0000028 ... P0ADZ4 24957822
    271964 4u26:CP (2.8) BS01 rna ? GO:0000028 ... P0A7T3 24957822
    271965 4u26:CQ (2.8) BS01 rna ? GO:0000028 ... P0AG63 24957822
    271966 4u26:CR (2.8) BS01 rna ? GO:0003735 ... P0A7T7 24957822
    271967 4u26:CS (2.8) BS01 rna ? GO:0003723 ... P0A7U3 24957822
    271968 4u26:CT (2.8) BS01 rna ? GO:0000028 ... P0A7U7 24957822
    271969 4u26:CU (2.8) BS01 rna ? GO:0003735 ... P68679 24957822
    271970 4u26:D0 (2.8) BS01 rna ? GO:0000027 ... P0A7N4 24957822
    271971 4u26:D1 (2.8) BS01 rna ? GO:0000027 ... P0A7N9 24957822
    271972 4u26:D2 (2.8) BS01 rna ? GO:0002181 ... P0A7P5 24957822
    271973 4u26:D3 (2.8) BS01 rna ? GO:0002181 ... P0A7Q1 24957822
    271974 4u26:D4 (2.8) BS01 rna ? GO:0002181 ... P0A7Q6 24957822
    271975 4u26:D4 (2.8) BS02 ZN ? GO:0002181 ... P0A7Q6 24957822
    271976 4u26:DC (2.8) BS01 rna ? GO:0000027 ... P60422 24957822
    271977 4u26:DD (2.8) BS01 rna ? GO:0000027 ... P60438 24957822
    271978 4u26:DE (2.8) BS01 rna ? GO:0001070 ... P60723 24957822
    271979 4u26:DF (2.8) BS01 rna ? GO:0000027 ... P62399 24957822
    271980 4u26:DF (2.8) BS02 rna ? GO:0000027 ... P62399 24957822
    271981 4u26:DG (2.8) BS01 rna ? GO:0000027 ... P0AG55 24957822
    271982 4u26:DH (2.8) BS01 rna ? GO:0002181 ... P0A7R1 24957822
    271983 4u26:DI (2.8) BS01 rna ? GO:0000027 ... P0A7J7 24957822
    271984 4u26:DJ (2.8) BS01 rna ? GO:0002181 ... P0AA10 24957822
    271985 4u26:DK (2.8) BS01 rna ? GO:0002181 ... P0ADY3 24957822
    271986 4u26:DK (2.8) BS02 rna ? GO:0002181 ... P0ADY3 24957822
    271987 4u26:DL (2.8) BS01 rna ? GO:0002181 ... P02413 24957822
    271988 4u26:DM (2.8) BS01 rna ? GO:0000027 ... P0ADY7 24957822
    271989 4u26:DM (2.8) BS02 rna ? GO:0000027 ... P0ADY7 24957822
    271990 4u26:DN (2.8) BS01 rna ? GO:0000027 ... P0AG44 24957822
    271991 4u26:DO (2.8) BS01 rna ? GO:0002181 ... P0C018 24957822
    271992 4u26:DO (2.8) BS02 rna ? GO:0002181 ... P0C018 24957822
    271993 4u26:DP (2.8) BS01 rna ? GO:0000027 ... P0A7K6 24957822
    271994 4u26:DP (2.8) BS02 rna ? GO:0000027 ... P0A7K6 24957822
    271995 4u26:DQ (2.8) BS01 rna ? GO:0000027 ... P0A7L3 24957822
    271996 4u26:DR (2.8) BS01 rna ? GO:0002181 ... P0AG48 24957822
    271997 4u26:DS (2.8) BS01 rna ? GO:0002181 ... P61175 24957822
    271998 4u26:DT (2.8) BS01 rna ? GO:0000027 ... P0ADZ0 24957822
    271999 4u26:DU (2.8) BS01 rna ? GO:0000027 ... P60624 24957822
    272000 4u26:DV (2.8) BS01 rna ? GO:0000027 ... P68919 24957822

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).