SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1353 1354 1355 1356 1357 1358 1359 1360 1361 1362 1363 1364 1365 1366 1367 1368 1369 1370 1371 1372 1373 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    272401 4u3m:l5 (3.0) BS02 rna ? GO:0000027 ... P26321 25209664
    272402 4u3m:l5 (3.0) BS03 MG ? GO:0000027 ... P26321 25209664
    272403 4u3m:l5 (3.0) BS04 OHX ? GO:0000027 ... P26321 25209664
    272404 4u3m:l5 (3.0) BS05 OHX ? GO:0000027 ... P26321 25209664
    272405 4u3m:l6 (3.0) BS01 rna ? GO:0000027 ... Q02326 25209664
    272406 4u3m:l7 (3.0) BS01 rna ? GO:0000463 ... P05737 25209664
    272407 4u3m:l7 (3.0) BS02 rna ? GO:0000463 ... P05737 25209664
    272408 4u3m:l8 (3.0) BS01 rna ? GO:0000470 ... P17076 25209664
    272409 4u3m:l8 (3.0) BS02 rna ? GO:0000470 ... P17076 25209664
    272410 4u3m:l9 (3.0) BS01 rna ? GO:0002181 ... P05738 25209664
    272411 4u3m:m0 (3.0) BS01 rna ? GO:0000027 ... P41805 25209664
    272412 4u3m:m0 (3.0) BS02 rna ? GO:0000027 ... P41805 25209664
    272413 4u3m:m0 (3.0) BS03 OHX ? GO:0000027 ... P41805 25209664
    272414 4u3m:m0 (3.0) BS04 OHX ? GO:0000027 ... P41805 25209664
    272415 4u3m:m0 (3.0) BS05 OHX ? GO:0000027 ... P41805 25209664
    272416 4u3m:m1 (3.0) BS01 rna ? GO:0000027 ... Q3E757 25209664
    272417 4u3m:m1 (3.0) BS02 rna ? GO:0000027 ... Q3E757 25209664
    272418 4u3m:m1 (3.0) BS03 OHX ? GO:0000027 ... Q3E757 25209664
    272419 4u3m:m2 (3.0) BS01 rna N/A N/A N/A 25209664
    272420 4u3m:m3 (3.0) BS01 rna ? GO:0002181 ... Q12690 25209664
    272421 4u3m:m3 (3.0) BS02 rna ? GO:0002181 ... Q12690 25209664
    272422 4u3m:m4 (3.0) BS01 rna ? GO:0000027 ... P36105 25209664
    272423 4u3m:m5 (3.0) BS01 rna ? GO:0000470 ... P05748 25209664
    272424 4u3m:m5 (3.0) BS02 rna ? GO:0000470 ... P05748 25209664
    272425 4u3m:m5 (3.0) BS03 OHX ? GO:0000470 ... P05748 25209664
    272426 4u3m:m6 (3.0) BS01 rna ? GO:0000470 ... P26784 25209664
    272427 4u3m:m6 (3.0) BS02 MG ? GO:0000470 ... P26784 25209664
    272428 4u3m:m7 (3.0) BS01 rna ? GO:0000448 ... P05740 25209664
    272429 4u3m:m7 (3.0) BS02 rna ? GO:0000448 ... P05740 25209664
    272430 4u3m:m7 (3.0) BS03 OHX ? GO:0000448 ... P05740 25209664
    272431 4u3m:m8 (3.0) BS01 rna ? GO:0002181 ... P0CX49 25209664
    272432 4u3m:m9 (3.0) BS01 rna ? GO:0002181 ... P0CX82 25209664
    272433 4u3m:m9 (3.0) BS02 rna ? GO:0002181 ... P0CX82 25209664
    272434 4u3m:n0 (3.0) BS01 rna ? GO:0002181 ... P0CX23 25209664
    272435 4u3m:n0 (3.0) BS02 rna ? GO:0002181 ... P0CX23 25209664
    272436 4u3m:n1 (3.0) BS01 rna ? GO:0002181 ... Q02753 25209664
    272437 4u3m:n1 (3.0) BS02 rna ? GO:0002181 ... Q02753 25209664
    272438 4u3m:n1 (3.0) BS03 OHX ? GO:0002181 ... Q02753 25209664
    272439 4u3m:n2 (3.0) BS01 rna ? GO:0002181 ... P05749 25209664
    272440 4u3m:n3 (3.0) BS01 rna ? GO:0002181 ... P0CX41 25209664
    272441 4u3m:n3 (3.0) BS02 rna ? GO:0002181 ... P0CX41 25209664
    272442 4u3m:n4 (3.0) BS01 rna ? GO:0002181 ... P04449 25209664
    272443 4u3m:n4 (3.0) BS02 rna ? GO:0002181 ... P04449 25209664
    272444 4u3m:n5 (3.0) BS01 rna ? GO:0000027 ... P04456 25209664
    272445 4u3m:n5 (3.0) BS02 rna ? GO:0000027 ... P04456 25209664
    272446 4u3m:n6 (3.0) BS01 rna ? GO:0002181 ... P05743 25209664
    272447 4u3m:n6 (3.0) BS02 rna ? GO:0002181 ... P05743 25209664
    272448 4u3m:n7 (3.0) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    272449 4u3m:n8 (3.0) BS01 rna ? GO:0002181 ... P02406 25209664
    272450 4u3m:n8 (3.0) BS02 OHX ? GO:0002181 ... P02406 25209664
    272451 4u3m:n9 (3.0) BS01 rna ? GO:0002181 ... P05747 25209664
    272452 4u3m:n9 (3.0) BS02 OHX ? GO:0002181 ... P05747 25209664
    272453 4u3m:o0 (3.0) BS01 rna ? GO:0002181 ... P14120 25209664
    272454 4u3m:o1 (3.0) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    272455 4u3m:o2 (3.0) BS01 rna ? GO:0002181 ... P38061 25209664
    272456 4u3m:o3 (3.0) BS01 rna ? GO:0000027 ... P05744 25209664
    272457 4u3m:o3 (3.0) BS02 MG ? GO:0000027 ... P05744 25209664
    272458 4u3m:o3 (3.0) BS03 OHX ? GO:0000027 ... P05744 25209664
    272459 4u3m:o4 (3.0) BS01 rna ? GO:0002181 ... P87262 25209664
    272460 4u3m:o4 (3.0) BS02 MG ? GO:0002181 ... P87262 25209664
    272461 4u3m:o5 (3.0) BS01 rna ? GO:0000463 ... P0CX84 25209664
    272462 4u3m:o5 (3.0) BS02 rna ? GO:0000463 ... P0CX84 25209664
    272463 4u3m:o6 (3.0) BS01 rna ? GO:0000470 ... P05745 25209664
    272464 4u3m:o7 (3.0) BS01 rna ? GO:0000448 ... P49166 25209664
    272465 4u3m:o7 (3.0) BS02 rna ? GO:0000448 ... P49166 25209664
    272466 4u3m:o7 (3.0) BS03 OHX ? GO:0000448 ... P49166 25209664
    272467 4u3m:o7 (3.0) BS04 ZN ? GO:0000448 ... P49166 25209664
    272468 4u3m:o7 (3.0) BS05 OHX ? GO:0000448 ... P49166 25209664
    272469 4u3m:o8 (3.0) BS01 rna ? GO:0002181 ... P49167 25209664
    272470 4u3m:o9 (3.0) BS01 rna ? GO:0002181 ... P04650 25209664
    272471 4u3m:o9 (3.0) BS02 rna ? GO:0002181 ... P04650 25209664
    272472 4u3m:o9 (3.0) BS03 OHX ? GO:0002181 ... P04650 25209664
    272473 4u3m:p0 (3.0) BS01 rna ? GO:0000027 ... P05317 25209664
    272474 4u3m:q0 (3.0) BS01 rna ? GO:0003735 ... P0CH08 25209664
    272475 4u3m:q0 (3.0) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    272476 4u3m:q2 (3.0) BS01 rna ? GO:0002181 ... P0CX27 25209664
    272477 4u3m:q2 (3.0) BS02 ZN ? GO:0002181 ... P0CX27 25209664
    272478 4u3m:q2 (3.0) BS03 OHX ? GO:0002181 ... P0CX27 25209664
    272479 4u3m:q3 (3.0) BS01 rna ? GO:0002181 ... P0CX25 25209664
    272480 4u3m:q3 (3.0) BS02 rna ? GO:0002181 ... P0CX25 25209664
    272481 4u3m:q3 (3.0) BS03 ZN ? GO:0002181 ... P0CX25 25209664
    272482 4u3m:s0 (3.0) BS01 rna ? GO:0000028 ... P32905 25209664
    272483 4u3m:s1 (3.0) BS01 rna ? GO:0000462 ... P33442 25209664
    272484 4u3m:s1 (3.0) BS02 rna ? GO:0000462 ... P33442 25209664
    272485 4u3m:s2 (3.0) BS01 rna ? GO:0000054 ... P25443 25209664
    272486 4u3m:s3 (3.0) BS01 rna ? GO:0000054 ... P05750 25209664
    272487 4u3m:s4 (3.0) BS01 rna ? GO:0002181 ... P0CX35 25209664
    272488 4u3m:s5 (3.0) BS01 rna ? GO:0000054 ... P26783 25209664
    272489 4u3m:s6 (3.0) BS01 rna ? GO:0000462 ... P0CX37 25209664
    272490 4u3m:s7 (3.0) BS01 rna ? GO:0002181 ... P26786 25209664
    272491 4u3m:s8 (3.0) BS01 rna ? GO:0000462 ... P0CX39 25209664
    272492 4u3m:s8 (3.0) BS02 rna ? GO:0000462 ... P0CX39 25209664
    272493 4u3m:s8 (3.0) BS03 OHX ? GO:0000462 ... P0CX39 25209664
    272494 4u3m:s9 (3.0) BS01 rna ? GO:0000462 ... O13516 25209664
    272495 4u3m:sM (3.0) BS01 rna ? GO:0000723 ... P39015 25209664
    272496 4u3m:sM (3.0) BS02 rna ? GO:0000723 ... P39015 25209664
    272497 4u3m:sM (3.0) BS03 MG ? GO:0000723 ... P39015 25209664
    272498 4u3m:sR (3.0) BS01 rna ? GO:0001965 ... P38011 25209664
    272499 4u3m:sR (3.0) BS02 OHX ? GO:0001965 ... P38011 25209664
    272500 4u3n:C0 (3.2) BS01 rna ? GO:0000054 ... Q08745 25209664
    272501 4u3n:C1 (3.2) BS01 rna ? GO:0000028 ... P0CX47 25209664
    272502 4u3n:C2 (3.2) BS01 rna ? GO:0000028 ... P48589 25209664
    272503 4u3n:C3 (3.2) BS01 rna ? GO:0000462 ... P05756 25209664
    272504 4u3n:C3 (3.2) BS02 rna ? GO:0000462 ... P05756 25209664
    272505 4u3n:C4 (3.2) BS01 rna ? GO:0000028 ... P06367 25209664
    272506 4u3n:C5 (3.2) BS01 rna ? GO:0000054 ... Q01855 25209664
    272507 4u3n:C5 (3.2) BS02 rna ? GO:0000054 ... Q01855 25209664
    272508 4u3n:C5 (3.2) BS03 OHX ? GO:0000054 ... Q01855 25209664
    272509 4u3n:C6 (3.2) BS01 rna ? GO:0000462 ... P0CX51 25209664
    272510 4u3n:C7 (3.2) BS01 rna ? GO:0000028 ... P02407 25209664
    272511 4u3n:C8 (3.2) BS01 rna ? GO:0000054 ... P0CX55 25209664
    272512 4u3n:C9 (3.2) BS01 rna ? GO:0000054 ... P07280 25209664
    272513 4u3n:D0 (3.2) BS01 rna ? GO:0000462 ... P38701 25209664
    272514 4u3n:D1 (3.2) BS01 rna ? GO:0000447 ... P0C0V8 25209664
    272515 4u3n:D2 (3.2) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    272516 4u3n:D3 (3.2) BS01 rna ? GO:0000462 ... P0CX29 25209664
    272517 4u3n:D4 (3.2) BS01 rna ? GO:0000462 ... P0CX31 25209664
    272518 4u3n:D5 (3.2) BS01 rna ? GO:0002181 ... Q3E792 25209664
    272519 4u3n:D6 (3.2) BS01 rna ? GO:0003735 ... P39939 25209664
    272520 4u3n:D6 (3.2) BS02 ZN ? GO:0003735 ... P39939 25209664
    272521 4u3n:D7 (3.2) BS01 rna ? GO:0000028 ... P35997 25209664
    272522 4u3n:D7 (3.2) BS02 ZN ? GO:0000028 ... P35997 25209664
    272523 4u3n:D8 (3.2) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    272524 4u3n:D9 (3.2) BS01 rna ? GO:0002181 ... P41057 25209664
    272525 4u3n:D9 (3.2) BS02 ZN ? GO:0002181 ... P41057 25209664
    272526 4u3n:D9 (3.2) BS03 OHX ? GO:0002181 ... P41057 25209664
    272527 4u3n:E0 (3.2) BS01 rna ? GO:0002181 ... P0CX33 25209664
    272528 4u3n:E1 (3.2) BS01 rna ? GO:0003735 ... P05759 25209664
    272529 4u3n:E1 (3.2) BS02 ZN ? GO:0003735 ... P05759 25209664
    272530 4u3n:L2 (3.2) BS01 rna ? GO:0002181 ... P0CX45 25209664
    272531 4u3n:L2 (3.2) BS02 rna ? GO:0002181 ... P0CX45 25209664
    272532 4u3n:L2 (3.2) BS03 MG ? GO:0002181 ... P0CX45 25209664
    272533 4u3n:L3 (3.2) BS01 rna ? GO:0000027 ... P14126 25209664
    272534 4u3n:L3 (3.2) BS02 OHX ? GO:0000027 ... P14126 25209664
    272535 4u3n:L4 (3.2) BS01 rna ? GO:0002181 ... P10664 25209664
    272536 4u3n:L4 (3.2) BS02 rna ? GO:0002181 ... P10664 25209664
    272537 4u3n:L4 (3.2) BS03 OHX ? GO:0002181 ... P10664 25209664
    272538 4u3n:L5 (3.2) BS01 rna ? GO:0000027 ... P26321 25209664
    272539 4u3n:L5 (3.2) BS02 rna ? GO:0000027 ... P26321 25209664
    272540 4u3n:L6 (3.2) BS01 rna ? GO:0000027 ... Q02326 25209664
    272541 4u3n:L7 (3.2) BS01 rna ? GO:0000463 ... P05737 25209664
    272542 4u3n:L7 (3.2) BS02 rna ? GO:0000463 ... P05737 25209664
    272543 4u3n:L8 (3.2) BS01 rna ? GO:0000470 ... P17076 25209664
    272544 4u3n:L8 (3.2) BS02 rna ? GO:0000470 ... P17076 25209664
    272545 4u3n:L9 (3.2) BS01 rna ? GO:0002181 ... P05738 25209664
    272546 4u3n:M0 (3.2) BS01 rna ? GO:0000027 ... P41805 25209664
    272547 4u3n:M0 (3.2) BS02 rna ? GO:0000027 ... P41805 25209664
    272548 4u3n:M0 (3.2) BS03 MG ? GO:0000027 ... P41805 25209664
    272549 4u3n:M1 (3.2) BS01 rna ? GO:0000027 ... Q3E757 25209664
    272550 4u3n:M1 (3.2) BS02 rna ? GO:0000027 ... Q3E757 25209664
    272551 4u3n:M3 (3.2) BS01 rna ? GO:0002181 ... Q12690 25209664
    272552 4u3n:M3 (3.2) BS02 rna ? GO:0002181 ... Q12690 25209664
    272553 4u3n:M4 (3.2) BS01 rna ? GO:0000027 ... P36105 25209664
    272554 4u3n:M5 (3.2) BS01 rna ? GO:0000470 ... P05748 25209664
    272555 4u3n:M5 (3.2) BS02 rna ? GO:0000470 ... P05748 25209664
    272556 4u3n:M6 (3.2) BS01 rna ? GO:0000470 ... P26784 25209664
    272557 4u3n:M7 (3.2) BS01 rna ? GO:0000448 ... P05740 25209664
    272558 4u3n:M7 (3.2) BS02 rna ? GO:0000448 ... P05740 25209664
    272559 4u3n:M7 (3.2) BS03 MG ? GO:0000448 ... P05740 25209664
    272560 4u3n:M7 (3.2) BS04 OHX ? GO:0000448 ... P05740 25209664
    272561 4u3n:M8 (3.2) BS01 rna ? GO:0002181 ... P0CX49 25209664
    272562 4u3n:M9 (3.2) BS01 rna ? GO:0002181 ... P0CX82 25209664
    272563 4u3n:M9 (3.2) BS02 rna ? GO:0002181 ... P0CX82 25209664
    272564 4u3n:M9 (3.2) BS03 MG ? GO:0002181 ... P0CX82 25209664
    272565 4u3n:M9 (3.2) BS04 OHX ? GO:0002181 ... P0CX82 25209664
    272566 4u3n:N0 (3.2) BS01 rna ? GO:0002181 ... P0CX23 25209664
    272567 4u3n:N0 (3.2) BS02 rna ? GO:0002181 ... P0CX23 25209664
    272568 4u3n:N1 (3.2) BS01 rna ? GO:0002181 ... Q02753 25209664
    272569 4u3n:N1 (3.2) BS02 rna ? GO:0002181 ... Q02753 25209664
    272570 4u3n:N1 (3.2) BS03 OHX ? GO:0002181 ... Q02753 25209664
    272571 4u3n:N2 (3.2) BS01 rna ? GO:0002181 ... P05749 25209664
    272572 4u3n:N3 (3.2) BS01 rna ? GO:0002181 ... P0CX41 25209664
    272573 4u3n:N3 (3.2) BS02 rna ? GO:0002181 ... P0CX41 25209664
    272574 4u3n:N4 (3.2) BS01 rna ? GO:0002181 ... P04449 25209664
    272575 4u3n:N5 (3.2) BS01 rna ? GO:0000027 ... P04456 25209664
    272576 4u3n:N5 (3.2) BS02 rna ? GO:0000027 ... P04456 25209664
    272577 4u3n:N6 (3.2) BS01 rna ? GO:0002181 ... P05743 25209664
    272578 4u3n:N6 (3.2) BS02 rna ? GO:0002181 ... P05743 25209664
    272579 4u3n:N7 (3.2) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    272580 4u3n:N8 (3.2) BS01 rna ? GO:0002181 ... P02406 25209664
    272581 4u3n:N8 (3.2) BS02 OHX ? GO:0002181 ... P02406 25209664
    272582 4u3n:N8 (3.2) BS03 MG ? GO:0002181 ... P02406 25209664
    272583 4u3n:N9 (3.2) BS01 rna ? GO:0002181 ... P05747 25209664
    272584 4u3n:N9 (3.2) BS02 OHX ? GO:0002181 ... P05747 25209664
    272585 4u3n:O0 (3.2) BS01 rna ? GO:0002181 ... P14120 25209664
    272586 4u3n:O1 (3.2) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    272587 4u3n:O2 (3.2) BS01 rna ? GO:0002181 ... P38061 25209664
    272588 4u3n:O3 (3.2) BS01 rna ? GO:0000027 ... P05744 25209664
    272589 4u3n:O3 (3.2) BS02 OHX ? GO:0000027 ... P05744 25209664
    272590 4u3n:O4 (3.2) BS01 rna ? GO:0002181 ... P87262 25209664
    272591 4u3n:O4 (3.2) BS02 MG ? GO:0002181 ... P87262 25209664
    272592 4u3n:O5 (3.2) BS01 rna ? GO:0000463 ... P0CX84 25209664
    272593 4u3n:O5 (3.2) BS02 rna ? GO:0000463 ... P0CX84 25209664
    272594 4u3n:O6 (3.2) BS01 rna ? GO:0000470 ... P05745 25209664
    272595 4u3n:O7 (3.2) BS01 rna ? GO:0000448 ... P49166 25209664
    272596 4u3n:O7 (3.2) BS02 rna ? GO:0000448 ... P49166 25209664
    272597 4u3n:O7 (3.2) BS03 OHX ? GO:0000448 ... P49166 25209664
    272598 4u3n:O7 (3.2) BS04 ZN ? GO:0000448 ... P49166 25209664
    272599 4u3n:O7 (3.2) BS05 OHX ? GO:0000448 ... P49166 25209664
    272600 4u3n:O8 (3.2) BS01 rna ? GO:0002181 ... P49167 25209664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).