SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    273201 4u4n:S6 (3.1) BS01 rna ? GO:0000462 ... P0CX37 25209664
    273202 4u4n:S7 (3.1) BS01 rna ? GO:0002181 ... P26786 25209664
    273203 4u4n:S8 (3.1) BS01 rna ? GO:0000462 ... P0CX39 25209664
    273204 4u4n:S8 (3.1) BS02 rna ? GO:0000462 ... P0CX39 25209664
    273205 4u4n:S8 (3.1) BS03 OHX ? GO:0000462 ... P0CX39 25209664
    273206 4u4n:S9 (3.1) BS01 rna ? GO:0000462 ... O13516 25209664
    273207 4u4n:S9 (3.1) BS02 OHX ? GO:0000462 ... O13516 25209664
    273208 4u4n:SM (3.1) BS01 rna ? GO:0000723 ... P39015 25209664
    273209 4u4n:SM (3.1) BS02 rna ? GO:0000723 ... P39015 25209664
    273210 4u4n:SR (3.1) BS01 rna ? GO:0001965 ... P38011 25209664
    273211 4u4n:SR (3.1) BS02 OHX ? GO:0001965 ... P38011 25209664
    273212 4u4n:c0 (3.1) BS01 rna ? GO:0000054 ... Q08745 25209664
    273213 4u4n:c1 (3.1) BS01 rna ? GO:0000028 ... P0CX47 25209664
    273214 4u4n:c2 (3.1) BS01 rna ? GO:0000028 ... P48589 25209664
    273215 4u4n:c3 (3.1) BS01 rna ? GO:0000462 ... P05756 25209664
    273216 4u4n:c3 (3.1) BS02 rna ? GO:0000462 ... P05756 25209664
    273217 4u4n:c3 (3.1) BS03 OHX ? GO:0000462 ... P05756 25209664
    273218 4u4n:c4 (3.1) BS01 rna ? GO:0000028 ... P06367 25209664
    273219 4u4n:c5 (3.1) BS01 rna ? GO:0000054 ... Q01855 25209664
    273220 4u4n:c5 (3.1) BS02 OHX ? GO:0000054 ... Q01855 25209664
    273221 4u4n:c6 (3.1) BS01 rna ? GO:0000462 ... P0CX51 25209664
    273222 4u4n:c7 (3.1) BS01 rna ? GO:0000028 ... P02407 25209664
    273223 4u4n:c8 (3.1) BS01 rna ? GO:0000054 ... P0CX55 25209664
    273224 4u4n:c9 (3.1) BS01 rna ? GO:0000054 ... P07280 25209664
    273225 4u4n:c9 (3.1) BS02 MG ? GO:0000054 ... P07280 25209664
    273226 4u4n:d0 (3.1) BS01 rna ? GO:0000462 ... P38701 25209664
    273227 4u4n:d2 (3.1) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    273228 4u4n:d3 (3.1) BS01 rna ? GO:0000462 ... P0CX29 25209664
    273229 4u4n:d4 (3.1) BS01 rna ? GO:0000462 ... P0CX31 25209664
    273230 4u4n:d5 (3.1) BS01 rna ? GO:0002181 ... Q3E792 25209664
    273231 4u4n:d6 (3.1) BS01 rna ? GO:0003735 ... P39939 25209664
    273232 4u4n:d6 (3.1) BS02 ZN ? GO:0003735 ... P39939 25209664
    273233 4u4n:d7 (3.1) BS01 rna ? GO:0000028 ... P35997 25209664
    273234 4u4n:d8 (3.1) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    273235 4u4n:d9 (3.1) BS01 rna ? GO:0002181 ... P41057 25209664
    273236 4u4n:d9 (3.1) BS02 ZN ? GO:0002181 ... P41057 25209664
    273237 4u4n:e0 (3.1) BS01 rna ? GO:0002181 ... P0CX33 25209664
    273238 4u4n:e1 (3.1) BS01 rna ? GO:0003735 ... P05759 25209664
    273239 4u4n:l2 (3.1) BS01 rna ? GO:0002181 ... P0CX45 25209664
    273240 4u4n:l2 (3.1) BS02 rna ? GO:0002181 ... P0CX45 25209664
    273241 4u4n:l2 (3.1) BS03 MG ? GO:0002181 ... P0CX45 25209664
    273242 4u4n:l3 (3.1) BS01 rna ? GO:0000027 ... P14126 25209664
    273243 4u4n:l3 (3.1) BS02 MG ? GO:0000027 ... P14126 25209664
    273244 4u4n:l3 (3.1) BS03 MG ? GO:0000027 ... P14126 25209664
    273245 4u4n:l3 (3.1) BS04 OHX ? GO:0000027 ... P14126 25209664
    273246 4u4n:l3 (3.1) BS05 OHX ? GO:0000027 ... P14126 25209664
    273247 4u4n:l4 (3.1) BS01 rna ? GO:0002181 ... P10664 25209664
    273248 4u4n:l4 (3.1) BS02 rna ? GO:0002181 ... P10664 25209664
    273249 4u4n:l4 (3.1) BS03 OHX ? GO:0002181 ... P10664 25209664
    273250 4u4n:l4 (3.1) BS04 OHX ? GO:0002181 ... P10664 25209664
    273251 4u4n:l5 (3.1) BS01 rna ? GO:0000027 ... P26321 25209664
    273252 4u4n:l5 (3.1) BS02 rna ? GO:0000027 ... P26321 25209664
    273253 4u4n:l5 (3.1) BS03 MG ? GO:0000027 ... P26321 25209664
    273254 4u4n:l5 (3.1) BS04 OHX ? GO:0000027 ... P26321 25209664
    273255 4u4n:l5 (3.1) BS05 OHX ? GO:0000027 ... P26321 25209664
    273256 4u4n:l6 (3.1) BS01 rna ? GO:0000027 ... Q02326 25209664
    273257 4u4n:l7 (3.1) BS01 rna ? GO:0000463 ... P05737 25209664
    273258 4u4n:l7 (3.1) BS02 rna ? GO:0000463 ... P05737 25209664
    273259 4u4n:l8 (3.1) BS01 rna ? GO:0000470 ... P17076 25209664
    273260 4u4n:l8 (3.1) BS02 rna ? GO:0000470 ... P17076 25209664
    273261 4u4n:l9 (3.1) BS01 rna ? GO:0002181 ... P05738 25209664
    273262 4u4n:l9 (3.1) BS02 OHX ? GO:0002181 ... P05738 25209664
    273263 4u4n:m0 (3.1) BS01 rna ? GO:0000027 ... P41805 25209664
    273264 4u4n:m0 (3.1) BS02 rna ? GO:0000027 ... P41805 25209664
    273265 4u4n:m0 (3.1) BS03 OHX ? GO:0000027 ... P41805 25209664
    273266 4u4n:m0 (3.1) BS04 OHX ? GO:0000027 ... P41805 25209664
    273267 4u4n:m1 (3.1) BS01 rna ? GO:0000027 ... Q3E757 25209664
    273268 4u4n:m1 (3.1) BS02 rna ? GO:0000027 ... Q3E757 25209664
    273269 4u4n:m1 (3.1) BS03 OHX ? GO:0000027 ... Q3E757 25209664
    273270 4u4n:m2 (3.1) BS01 rna N/A N/A N/A 25209664
    273271 4u4n:m3 (3.1) BS01 rna ? GO:0002181 ... Q12690 25209664
    273272 4u4n:m3 (3.1) BS02 rna ? GO:0002181 ... Q12690 25209664
    273273 4u4n:m4 (3.1) BS01 rna ? GO:0000027 ... P36105 25209664
    273274 4u4n:m5 (3.1) BS01 rna ? GO:0000470 ... P05748 25209664
    273275 4u4n:m5 (3.1) BS02 rna ? GO:0000470 ... P05748 25209664
    273276 4u4n:m5 (3.1) BS03 OHX ? GO:0000470 ... P05748 25209664
    273277 4u4n:m6 (3.1) BS01 rna ? GO:0000470 ... P26784 25209664
    273278 4u4n:m6 (3.1) BS02 MG ? GO:0000470 ... P26784 25209664
    273279 4u4n:m7 (3.1) BS01 rna ? GO:0000448 ... P05740 25209664
    273280 4u4n:m7 (3.1) BS02 rna ? GO:0000448 ... P05740 25209664
    273281 4u4n:m7 (3.1) BS03 OHX ? GO:0000448 ... P05740 25209664
    273282 4u4n:m8 (3.1) BS01 rna ? GO:0002181 ... P0CX49 25209664
    273283 4u4n:m9 (3.1) BS01 rna ? GO:0002181 ... P0CX82 25209664
    273284 4u4n:m9 (3.1) BS02 rna ? GO:0002181 ... P0CX82 25209664
    273285 4u4n:m9 (3.1) BS03 OHX ? GO:0002181 ... P0CX82 25209664
    273286 4u4n:n0 (3.1) BS01 rna ? GO:0002181 ... P0CX23 25209664
    273287 4u4n:n0 (3.1) BS02 rna ? GO:0002181 ... P0CX23 25209664
    273288 4u4n:n1 (3.1) BS01 rna ? GO:0002181 ... Q02753 25209664
    273289 4u4n:n1 (3.1) BS02 rna ? GO:0002181 ... Q02753 25209664
    273290 4u4n:n1 (3.1) BS03 OHX ? GO:0002181 ... Q02753 25209664
    273291 4u4n:n2 (3.1) BS01 rna ? GO:0002181 ... P05749 25209664
    273292 4u4n:n3 (3.1) BS01 rna ? GO:0002181 ... P0CX41 25209664
    273293 4u4n:n3 (3.1) BS02 rna ? GO:0002181 ... P0CX41 25209664
    273294 4u4n:n3 (3.1) BS03 OHX ? GO:0002181 ... P0CX41 25209664
    273295 4u4n:n3 (3.1) BS04 OHX ? GO:0002181 ... P0CX41 25209664
    273296 4u4n:n4 (3.1) BS01 rna ? GO:0002181 ... P04449 25209664
    273297 4u4n:n4 (3.1) BS02 rna ? GO:0002181 ... P04449 25209664
    273298 4u4n:n5 (3.1) BS01 rna ? GO:0000027 ... P04456 25209664
    273299 4u4n:n5 (3.1) BS02 rna ? GO:0000027 ... P04456 25209664
    273300 4u4n:n6 (3.1) BS01 rna ? GO:0002181 ... P05743 25209664
    273301 4u4n:n6 (3.1) BS02 rna ? GO:0002181 ... P05743 25209664
    273302 4u4n:n6 (3.1) BS03 OHX ? GO:0002181 ... P05743 25209664
    273303 4u4n:n7 (3.1) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    273304 4u4n:n8 (3.1) BS01 rna ? GO:0002181 ... P02406 25209664
    273305 4u4n:n8 (3.1) BS02 MG ? GO:0002181 ... P02406 25209664
    273306 4u4n:n9 (3.1) BS01 rna ? GO:0002181 ... P05747 25209664
    273307 4u4n:n9 (3.1) BS02 OHX ? GO:0002181 ... P05747 25209664
    273308 4u4n:o0 (3.1) BS01 rna ? GO:0002181 ... P14120 25209664
    273309 4u4n:o1 (3.1) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    273310 4u4n:o2 (3.1) BS01 rna ? GO:0002181 ... P38061 25209664
    273311 4u4n:o3 (3.1) BS01 rna ? GO:0000027 ... P05744 25209664
    273312 4u4n:o3 (3.1) BS02 MG ? GO:0000027 ... P05744 25209664
    273313 4u4n:o3 (3.1) BS03 OHX ? GO:0000027 ... P05744 25209664
    273314 4u4n:o4 (3.1) BS01 rna ? GO:0002181 ... P87262 25209664
    273315 4u4n:o4 (3.1) BS02 MG ? GO:0002181 ... P87262 25209664
    273316 4u4n:o5 (3.1) BS01 rna ? GO:0000463 ... P0CX84 25209664
    273317 4u4n:o5 (3.1) BS02 rna ? GO:0000463 ... P0CX84 25209664
    273318 4u4n:o6 (3.1) BS01 rna ? GO:0000470 ... P05745 25209664
    273319 4u4n:o7 (3.1) BS01 rna ? GO:0000448 ... P49166 25209664
    273320 4u4n:o7 (3.1) BS02 rna ? GO:0000448 ... P49166 25209664
    273321 4u4n:o7 (3.1) BS03 ZN ? GO:0000448 ... P49166 25209664
    273322 4u4n:o7 (3.1) BS04 OHX ? GO:0000448 ... P49166 25209664
    273323 4u4n:o8 (3.1) BS01 rna ? GO:0002181 ... P49167 25209664
    273324 4u4n:o9 (3.1) BS01 rna ? GO:0002181 ... P04650 25209664
    273325 4u4n:o9 (3.1) BS02 rna ? GO:0002181 ... P04650 25209664
    273326 4u4n:p0 (3.1) BS01 rna ? GO:0000027 ... P05317 25209664
    273327 4u4n:q0 (3.1) BS01 rna ? GO:0003735 ... P0CH08 25209664
    273328 4u4n:q0 (3.1) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    273329 4u4n:q2 (3.1) BS01 rna ? GO:0002181 ... P0CX27 25209664
    273330 4u4n:q2 (3.1) BS02 OHX ? GO:0002181 ... P0CX27 25209664
    273331 4u4n:q3 (3.1) BS01 rna ? GO:0002181 ... P0CX25 25209664
    273332 4u4n:q3 (3.1) BS02 rna ? GO:0002181 ... P0CX25 25209664
    273333 4u4n:q3 (3.1) BS03 ZN ? GO:0002181 ... P0CX25 25209664
    273334 4u4n:s0 (3.1) BS01 rna ? GO:0000028 ... P32905 25209664
    273335 4u4n:s1 (3.1) BS01 rna ? GO:0000462 ... P33442 25209664
    273336 4u4n:s1 (3.1) BS02 OHX ? GO:0000462 ... P33442 25209664
    273337 4u4n:s2 (3.1) BS01 rna ? GO:0000054 ... P25443 25209664
    273338 4u4n:s3 (3.1) BS01 rna ? GO:0000054 ... P05750 25209664
    273339 4u4n:s4 (3.1) BS01 rna ? GO:0002181 ... P0CX35 25209664
    273340 4u4n:s5 (3.1) BS01 rna ? GO:0000054 ... P26783 25209664
    273341 4u4n:s6 (3.1) BS01 rna ? GO:0000462 ... P0CX37 25209664
    273342 4u4n:s7 (3.1) BS01 rna ? GO:0002181 ... P26786 25209664
    273343 4u4n:s8 (3.1) BS01 rna ? GO:0000462 ... P0CX39 25209664
    273344 4u4n:s8 (3.1) BS02 rna ? GO:0000462 ... P0CX39 25209664
    273345 4u4n:s9 (3.1) BS01 rna ? GO:0000462 ... O13516 25209664
    273346 4u4n:sM (3.1) BS01 rna ? GO:0000723 ... P39015 25209664
    273347 4u4n:sM (3.1) BS02 rna ? GO:0000723 ... P39015 25209664
    273348 4u4n:sR (3.1) BS01 rna ? GO:0001965 ... P38011 25209664
    273349 4u4o:C0 (3.6) BS01 rna ? GO:0000054 ... Q08745 25209664
    273350 4u4o:C1 (3.6) BS01 rna ? GO:0000028 ... P0CX47 25209664
    273351 4u4o:C1 (3.6) BS02 OHX ? GO:0000028 ... P0CX47 25209664
    273352 4u4o:C2 (3.6) BS01 rna ? GO:0000028 ... P48589 25209664
    273353 4u4o:C3 (3.6) BS01 rna ? GO:0000462 ... P05756 25209664
    273354 4u4o:C3 (3.6) BS02 rna ? GO:0000462 ... P05756 25209664
    273355 4u4o:C4 (3.6) BS01 rna ? GO:0000028 ... P06367 25209664
    273356 4u4o:C5 (3.6) BS01 rna ? GO:0000054 ... Q01855 25209664
    273357 4u4o:C5 (3.6) BS02 rna ? GO:0000054 ... Q01855 25209664
    273358 4u4o:C5 (3.6) BS03 OHX ? GO:0000054 ... Q01855 25209664
    273359 4u4o:C6 (3.6) BS01 rna ? GO:0000462 ... P0CX51 25209664
    273360 4u4o:C7 (3.6) BS01 rna ? GO:0000028 ... P02407 25209664
    273361 4u4o:C8 (3.6) BS01 rna ? GO:0000054 ... P0CX55 25209664
    273362 4u4o:C9 (3.6) BS01 rna ? GO:0000054 ... P07280 25209664
    273363 4u4o:D0 (3.6) BS01 rna ? GO:0000462 ... P38701 25209664
    273364 4u4o:D1 (3.6) BS01 rna ? GO:0000447 ... P0C0V8 25209664
    273365 4u4o:D2 (3.6) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    273366 4u4o:D3 (3.6) BS01 rna ? GO:0000462 ... P0CX29 25209664
    273367 4u4o:D4 (3.6) BS01 rna ? GO:0000462 ... P0CX31 25209664
    273368 4u4o:D5 (3.6) BS01 rna ? GO:0002181 ... Q3E792 25209664
    273369 4u4o:D6 (3.6) BS01 rna ? GO:0003735 ... P39939 25209664
    273370 4u4o:D6 (3.6) BS02 ZN ? GO:0003735 ... P39939 25209664
    273371 4u4o:D7 (3.6) BS01 rna ? GO:0000028 ... P35997 25209664
    273372 4u4o:D8 (3.6) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    273373 4u4o:D9 (3.6) BS01 rna ? GO:0002181 ... P41057 25209664
    273374 4u4o:D9 (3.6) BS02 ZN ? GO:0002181 ... P41057 25209664
    273375 4u4o:D9 (3.6) BS03 OHX ? GO:0002181 ... P41057 25209664
    273376 4u4o:E0 (3.6) BS01 rna ? GO:0002181 ... P0CX33 25209664
    273377 4u4o:E1 (3.6) BS01 rna ? GO:0003735 ... P05759 25209664
    273378 4u4o:E1 (3.6) BS02 ZN ? GO:0003735 ... P05759 25209664
    273379 4u4o:L2 (3.6) BS01 rna ? GO:0002181 ... P0CX45 25209664
    273380 4u4o:L2 (3.6) BS02 rna ? GO:0002181 ... P0CX45 25209664
    273381 4u4o:L2 (3.6) BS03 MG ? GO:0002181 ... P0CX45 25209664
    273382 4u4o:L3 (3.6) BS01 rna ? GO:0000027 ... P14126 25209664
    273383 4u4o:L3 (3.6) BS02 MG ? GO:0000027 ... P14126 25209664
    273384 4u4o:L3 (3.6) BS03 OHX ? GO:0000027 ... P14126 25209664
    273385 4u4o:L3 (3.6) BS04 OHX ? GO:0000027 ... P14126 25209664
    273386 4u4o:L3 (3.6) BS05 OHX ? GO:0000027 ... P14126 25209664
    273387 4u4o:L3 (3.6) BS06 OHX ? GO:0000027 ... P14126 25209664
    273388 4u4o:L4 (3.6) BS01 rna ? GO:0002181 ... P10664 25209664
    273389 4u4o:L4 (3.6) BS02 rna ? GO:0002181 ... P10664 25209664
    273390 4u4o:L4 (3.6) BS03 OHX ? GO:0002181 ... P10664 25209664
    273391 4u4o:L5 (3.6) BS01 rna ? GO:0000027 ... P26321 25209664
    273392 4u4o:L5 (3.6) BS02 rna ? GO:0000027 ... P26321 25209664
    273393 4u4o:L6 (3.6) BS01 rna ? GO:0000027 ... Q02326 25209664
    273394 4u4o:L7 (3.6) BS01 rna ? GO:0000463 ... P05737 25209664
    273395 4u4o:L7 (3.6) BS02 rna ? GO:0000463 ... P05737 25209664
    273396 4u4o:L8 (3.6) BS01 rna ? GO:0000470 ... P17076 25209664
    273397 4u4o:L8 (3.6) BS02 rna ? GO:0000470 ... P17076 25209664
    273398 4u4o:L9 (3.6) BS01 rna ? GO:0002181 ... P05738 25209664
    273399 4u4o:M0 (3.6) BS01 rna ? GO:0000027 ... P41805 25209664
    273400 4u4o:M0 (3.6) BS02 rna ? GO:0000027 ... P41805 25209664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).