SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    274401 4u4u:o1 (3.0) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    274402 4u4u:o2 (3.0) BS01 rna ? GO:0002181 ... P38061 25209664
    274403 4u4u:o3 (3.0) BS01 rna ? GO:0000027 ... P05744 25209664
    274404 4u4u:o3 (3.0) BS02 MG ? GO:0000027 ... P05744 25209664
    274405 4u4u:o3 (3.0) BS03 OHX ? GO:0000027 ... P05744 25209664
    274406 4u4u:o4 (3.0) BS01 rna ? GO:0002181 ... P87262 25209664
    274407 4u4u:o5 (3.0) BS01 rna ? GO:0000463 ... P0CX84 25209664
    274408 4u4u:o5 (3.0) BS02 rna ? GO:0000463 ... P0CX84 25209664
    274409 4u4u:o6 (3.0) BS01 rna ? GO:0000470 ... P05745 25209664
    274410 4u4u:o7 (3.0) BS01 rna ? GO:0000448 ... P49166 25209664
    274411 4u4u:o7 (3.0) BS02 rna ? GO:0000448 ... P49166 25209664
    274412 4u4u:o7 (3.0) BS03 ZN ? GO:0000448 ... P49166 25209664
    274413 4u4u:o7 (3.0) BS04 OHX ? GO:0000448 ... P49166 25209664
    274414 4u4u:o7 (3.0) BS05 OHX ? GO:0000448 ... P49166 25209664
    274415 4u4u:o8 (3.0) BS01 rna ? GO:0002181 ... P49167 25209664
    274416 4u4u:o9 (3.0) BS01 rna ? GO:0002181 ... P04650 25209664
    274417 4u4u:o9 (3.0) BS02 rna ? GO:0002181 ... P04650 25209664
    274418 4u4u:o9 (3.0) BS03 OHX ? GO:0002181 ... P04650 25209664
    274419 4u4u:p0 (3.0) BS01 rna ? GO:0000027 ... P05317 25209664
    274420 4u4u:q0 (3.0) BS01 rna ? GO:0003735 ... P0CH08 25209664
    274421 4u4u:q0 (3.0) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    274422 4u4u:q2 (3.0) BS01 rna ? GO:0002181 ... P0CX27 25209664
    274423 4u4u:q2 (3.0) BS02 ZN ? GO:0002181 ... P0CX27 25209664
    274424 4u4u:q2 (3.0) BS03 OHX ? GO:0002181 ... P0CX27 25209664
    274425 4u4u:q3 (3.0) BS01 rna ? GO:0002181 ... P0CX25 25209664
    274426 4u4u:q3 (3.0) BS02 rna ? GO:0002181 ... P0CX25 25209664
    274427 4u4u:q3 (3.0) BS03 ZN ? GO:0002181 ... P0CX25 25209664
    274428 4u4u:s0 (3.0) BS01 rna ? GO:0000028 ... P32905 25209664
    274429 4u4u:s1 (3.0) BS01 rna ? GO:0000462 ... P33442 25209664
    274430 4u4u:s2 (3.0) BS01 rna ? GO:0000054 ... P25443 25209664
    274431 4u4u:s3 (3.0) BS01 rna ? GO:0000054 ... P05750 25209664
    274432 4u4u:s4 (3.0) BS01 rna ? GO:0002181 ... P0CX35 25209664
    274433 4u4u:s4 (3.0) BS02 MG ? GO:0002181 ... P0CX35 25209664
    274434 4u4u:s5 (3.0) BS01 rna ? GO:0000054 ... P26783 25209664
    274435 4u4u:s6 (3.0) BS01 rna ? GO:0000462 ... P0CX37 25209664
    274436 4u4u:s7 (3.0) BS01 rna ? GO:0002181 ... P26786 25209664
    274437 4u4u:s8 (3.0) BS01 rna ? GO:0000462 ... P0CX39 25209664
    274438 4u4u:s8 (3.0) BS02 rna ? GO:0000462 ... P0CX39 25209664
    274439 4u4u:s8 (3.0) BS03 OHX ? GO:0000462 ... P0CX39 25209664
    274440 4u4u:s9 (3.0) BS01 rna ? GO:0000462 ... O13516 25209664
    274441 4u4u:sM (3.0) BS01 rna ? GO:0000723 ... P39015 25209664
    274442 4u4u:sM (3.0) BS02 rna ? GO:0000723 ... P39015 25209664
    274443 4u4u:sR (3.0) BS01 rna ? GO:0001965 ... P38011 25209664
    274444 4u4w:A (2.4) BS01 NO3 ? GO:0005452 ... P10903 25959928
    274445 4u4w:B (2.4) BS01 NO3 ? GO:0005452 ... P10903 25959928
    274446 4u4x:A (1.56) BS01 3C2 ? GO:0015276 ... P19491 25375781 MOAD: Kd=9.8uM
    274447 4u4x:A (1.56) BS02 GLU ? GO:0015276 ... P19491 25375781
    274448 4u4x:A (1.56) BS03 3C2 ? GO:0015276 ... P19491 25375781 MOAD: Kd=9.8uM
    274449 4u4x:B (1.56) BS01 3C2 ? GO:0015276 ... P19491 25375781 MOAD: Kd=9.8uM
    274450 4u4x:B (1.56) BS02 3C2 ? GO:0015276 ... P19491 25375781 MOAD: Kd=9.8uM
    274451 4u4x:B (1.56) BS03 GLU ? GO:0015276 ... P19491 25375781
    274452 4u4y:C0 (3.2) BS01 rna ? GO:0000054 ... Q08745 25209664
    274453 4u4y:C1 (3.2) BS01 rna ? GO:0000028 ... P0CX47 25209664
    274454 4u4y:C2 (3.2) BS01 rna ? GO:0000028 ... P48589 25209664
    274455 4u4y:C3 (3.2) BS01 rna ? GO:0000462 ... P05756 25209664
    274456 4u4y:C3 (3.2) BS02 rna ? GO:0000462 ... P05756 25209664
    274457 4u4y:C4 (3.2) BS01 rna ? GO:0000028 ... P06367 25209664
    274458 4u4y:C5 (3.2) BS01 rna ? GO:0000054 ... Q01855 25209664
    274459 4u4y:C5 (3.2) BS02 rna ? GO:0000054 ... Q01855 25209664
    274460 4u4y:C5 (3.2) BS03 OHX ? GO:0000054 ... Q01855 25209664
    274461 4u4y:C6 (3.2) BS01 rna ? GO:0000462 ... P0CX51 25209664
    274462 4u4y:C7 (3.2) BS01 rna ? GO:0000028 ... P02407 25209664
    274463 4u4y:C8 (3.2) BS01 rna ? GO:0000054 ... P0CX55 25209664
    274464 4u4y:C9 (3.2) BS01 rna ? GO:0000054 ... P07280 25209664
    274465 4u4y:D0 (3.2) BS01 rna ? GO:0000462 ... P38701 25209664
    274466 4u4y:D1 (3.2) BS01 rna ? GO:0000447 ... P0C0V8 25209664
    274467 4u4y:D2 (3.2) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    274468 4u4y:D3 (3.2) BS01 rna ? GO:0000462 ... P0CX29 25209664
    274469 4u4y:D4 (3.2) BS01 rna ? GO:0000462 ... P0CX31 25209664
    274470 4u4y:D5 (3.2) BS01 rna ? GO:0002181 ... Q3E792 25209664
    274471 4u4y:D6 (3.2) BS01 rna ? GO:0003735 ... P39939 25209664
    274472 4u4y:D6 (3.2) BS02 ZN ? GO:0003735 ... P39939 25209664
    274473 4u4y:D7 (3.2) BS01 rna ? GO:0000028 ... P35997 25209664
    274474 4u4y:D7 (3.2) BS02 ZN ? GO:0000028 ... P35997 25209664
    274475 4u4y:D8 (3.2) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    274476 4u4y:D9 (3.2) BS01 rna ? GO:0002181 ... P41057 25209664
    274477 4u4y:D9 (3.2) BS02 ZN ? GO:0002181 ... P41057 25209664
    274478 4u4y:D9 (3.2) BS03 OHX ? GO:0002181 ... P41057 25209664
    274479 4u4y:E0 (3.2) BS01 rna ? GO:0002181 ... P0CX33 25209664
    274480 4u4y:E1 (3.2) BS01 rna ? GO:0003735 ... P05759 25209664
    274481 4u4y:E1 (3.2) BS02 ZN ? GO:0003735 ... P05759 25209664
    274482 4u4y:L2 (3.2) BS01 rna ? GO:0002181 ... P0CX45 25209664
    274483 4u4y:L2 (3.2) BS02 rna ? GO:0002181 ... P0CX45 25209664
    274484 4u4y:L2 (3.2) BS03 MG ? GO:0002181 ... P0CX45 25209664
    274485 4u4y:L2 (3.2) BS04 MG ? GO:0002181 ... P0CX45 25209664
    274486 4u4y:L3 (3.2) BS01 rna ? GO:0000027 ... P14126 25209664
    274487 4u4y:L3 (3.2) BS02 MG ? GO:0000027 ... P14126 25209664
    274488 4u4y:L3 (3.2) BS03 OHX ? GO:0000027 ... P14126 25209664
    274489 4u4y:L3 (3.2) BS04 OHX ? GO:0000027 ... P14126 25209664
    274490 4u4y:L4 (3.2) BS01 rna ? GO:0002181 ... P10664 25209664
    274491 4u4y:L4 (3.2) BS02 rna ? GO:0002181 ... P10664 25209664
    274492 4u4y:L4 (3.2) BS03 OHX ? GO:0002181 ... P10664 25209664
    274493 4u4y:L5 (3.2) BS01 rna ? GO:0000027 ... P26321 25209664
    274494 4u4y:L5 (3.2) BS02 rna ? GO:0000027 ... P26321 25209664
    274495 4u4y:L6 (3.2) BS01 rna ? GO:0000027 ... Q02326 25209664
    274496 4u4y:L7 (3.2) BS01 rna ? GO:0000463 ... P05737 25209664
    274497 4u4y:L7 (3.2) BS02 rna ? GO:0000463 ... P05737 25209664
    274498 4u4y:L8 (3.2) BS01 rna ? GO:0000470 ... P17076 25209664
    274499 4u4y:L8 (3.2) BS02 rna ? GO:0000470 ... P17076 25209664
    274500 4u4y:L9 (3.2) BS01 rna ? GO:0002181 ... P05738 25209664
    274501 4u4y:M0 (3.2) BS01 rna ? GO:0000027 ... P41805 25209664
    274502 4u4y:M0 (3.2) BS02 rna ? GO:0000027 ... P41805 25209664
    274503 4u4y:M0 (3.2) BS03 MG ? GO:0000027 ... P41805 25209664
    274504 4u4y:M1 (3.2) BS01 rna ? GO:0000027 ... Q3E757 25209664
    274505 4u4y:M1 (3.2) BS02 rna ? GO:0000027 ... Q3E757 25209664
    274506 4u4y:M3 (3.2) BS01 rna ? GO:0002181 ... Q12690 25209664
    274507 4u4y:M3 (3.2) BS02 rna ? GO:0002181 ... Q12690 25209664
    274508 4u4y:M4 (3.2) BS01 rna ? GO:0000027 ... P36105 25209664
    274509 4u4y:M5 (3.2) BS01 rna ? GO:0000470 ... P05748 25209664
    274510 4u4y:M5 (3.2) BS02 rna ? GO:0000470 ... P05748 25209664
    274511 4u4y:M5 (3.2) BS03 OHX ? GO:0000470 ... P05748 25209664
    274512 4u4y:M6 (3.2) BS01 rna ? GO:0000470 ... P26784 25209664
    274513 4u4y:M7 (3.2) BS01 rna ? GO:0000448 ... P05740 25209664
    274514 4u4y:M7 (3.2) BS02 rna ? GO:0000448 ... P05740 25209664
    274515 4u4y:M7 (3.2) BS03 MG ? GO:0000448 ... P05740 25209664
    274516 4u4y:M7 (3.2) BS04 OHX ? GO:0000448 ... P05740 25209664
    274517 4u4y:M8 (3.2) BS01 rna ? GO:0002181 ... P0CX49 25209664
    274518 4u4y:M9 (3.2) BS01 rna ? GO:0002181 ... P0CX82 25209664
    274519 4u4y:M9 (3.2) BS02 rna ? GO:0002181 ... P0CX82 25209664
    274520 4u4y:M9 (3.2) BS03 MG ? GO:0002181 ... P0CX82 25209664
    274521 4u4y:M9 (3.2) BS04 OHX ? GO:0002181 ... P0CX82 25209664
    274522 4u4y:N0 (3.2) BS01 rna ? GO:0002181 ... P0CX23 25209664
    274523 4u4y:N0 (3.2) BS02 rna ? GO:0002181 ... P0CX23 25209664
    274524 4u4y:N1 (3.2) BS01 rna ? GO:0002181 ... Q02753 25209664
    274525 4u4y:N1 (3.2) BS02 rna ? GO:0002181 ... Q02753 25209664
    274526 4u4y:N1 (3.2) BS03 OHX ? GO:0002181 ... Q02753 25209664
    274527 4u4y:N2 (3.2) BS01 rna ? GO:0002181 ... P05749 25209664
    274528 4u4y:N3 (3.2) BS01 rna ? GO:0002181 ... P0CX41 25209664
    274529 4u4y:N3 (3.2) BS02 rna ? GO:0002181 ... P0CX41 25209664
    274530 4u4y:N4 (3.2) BS01 rna ? GO:0002181 ... P04449 25209664
    274531 4u4y:N4 (3.2) BS02 rna ? GO:0002181 ... P04449 25209664
    274532 4u4y:N5 (3.2) BS01 rna ? GO:0000027 ... P04456 25209664
    274533 4u4y:N5 (3.2) BS02 rna ? GO:0000027 ... P04456 25209664
    274534 4u4y:N6 (3.2) BS01 rna ? GO:0002181 ... P05743 25209664
    274535 4u4y:N6 (3.2) BS02 rna ? GO:0002181 ... P05743 25209664
    274536 4u4y:N7 (3.2) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    274537 4u4y:N7 (3.2) BS02 OHX ? GO:0002181 ... P0C2H6 25209664
    274538 4u4y:N8 (3.2) BS01 rna ? GO:0002181 ... P02406 25209664
    274539 4u4y:N8 (3.2) BS02 MG ? GO:0002181 ... P02406 25209664
    274540 4u4y:N8 (3.2) BS03 MG ? GO:0002181 ... P02406 25209664
    274541 4u4y:N9 (3.2) BS01 rna ? GO:0002181 ... P05747 25209664
    274542 4u4y:N9 (3.2) BS02 OHX ? GO:0002181 ... P05747 25209664
    274543 4u4y:O0 (3.2) BS01 rna ? GO:0002181 ... P14120 25209664
    274544 4u4y:O1 (3.2) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    274545 4u4y:O2 (3.2) BS01 rna ? GO:0002181 ... P38061 25209664
    274546 4u4y:O3 (3.2) BS01 rna ? GO:0000027 ... P05744 25209664
    274547 4u4y:O3 (3.2) BS02 OHX ? GO:0000027 ... P05744 25209664
    274548 4u4y:O4 (3.2) BS01 rna ? GO:0002181 ... P87262 25209664
    274549 4u4y:O4 (3.2) BS02 MG ? GO:0002181 ... P87262 25209664
    274550 4u4y:O5 (3.2) BS01 rna ? GO:0000463 ... P0CX84 25209664
    274551 4u4y:O5 (3.2) BS02 rna ? GO:0000463 ... P0CX84 25209664
    274552 4u4y:O6 (3.2) BS01 rna ? GO:0000470 ... P05745 25209664
    274553 4u4y:O7 (3.2) BS01 rna ? GO:0000448 ... P49166 25209664
    274554 4u4y:O7 (3.2) BS02 rna ? GO:0000448 ... P49166 25209664
    274555 4u4y:O7 (3.2) BS03 OHX ? GO:0000448 ... P49166 25209664
    274556 4u4y:O7 (3.2) BS04 ZN ? GO:0000448 ... P49166 25209664
    274557 4u4y:O7 (3.2) BS05 OHX ? GO:0000448 ... P49166 25209664
    274558 4u4y:O8 (3.2) BS01 rna ? GO:0002181 ... P49167 25209664
    274559 4u4y:O9 (3.2) BS01 rna ? GO:0002181 ... P04650 25209664
    274560 4u4y:O9 (3.2) BS02 rna ? GO:0002181 ... P04650 25209664
    274561 4u4y:Q0 (3.2) BS01 rna ? GO:0003735 ... P0CH08 25209664
    274562 4u4y:Q0 (3.2) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    274563 4u4y:Q2 (3.2) BS01 rna ? GO:0002181 ... P0CX27 25209664
    274564 4u4y:Q2 (3.2) BS02 ZN ? GO:0002181 ... P0CX27 25209664
    274565 4u4y:Q2 (3.2) BS03 OHX ? GO:0002181 ... P0CX27 25209664
    274566 4u4y:Q3 (3.2) BS01 rna ? GO:0002181 ... P0CX25 25209664
    274567 4u4y:Q3 (3.2) BS02 ZN ? GO:0002181 ... P0CX25 25209664
    274568 4u4y:S0 (3.2) BS01 rna ? GO:0000028 ... P32905 25209664
    274569 4u4y:S1 (3.2) BS01 rna ? GO:0000462 ... P33442 25209664
    274570 4u4y:S2 (3.2) BS01 rna ? GO:0000054 ... P25443 25209664
    274571 4u4y:S3 (3.2) BS01 rna ? GO:0000054 ... P05750 25209664
    274572 4u4y:S4 (3.2) BS01 rna ? GO:0002181 ... P0CX35 25209664
    274573 4u4y:S5 (3.2) BS01 rna ? GO:0000054 ... P26783 25209664
    274574 4u4y:S6 (3.2) BS01 rna ? GO:0000462 ... P0CX37 25209664
    274575 4u4y:S7 (3.2) BS01 rna ? GO:0002181 ... P26786 25209664
    274576 4u4y:S8 (3.2) BS01 rna ? GO:0000462 ... P0CX39 25209664
    274577 4u4y:S8 (3.2) BS02 rna ? GO:0000462 ... P0CX39 25209664
    274578 4u4y:S8 (3.2) BS03 OHX ? GO:0000462 ... P0CX39 25209664
    274579 4u4y:S9 (3.2) BS01 rna ? GO:0000462 ... O13516 25209664
    274580 4u4y:S9 (3.2) BS02 OHX ? GO:0000462 ... O13516 25209664
    274581 4u4y:SM (3.2) BS01 rna ? GO:0000723 ... P39015 25209664
    274582 4u4y:SM (3.2) BS02 rna ? GO:0000723 ... P39015 25209664
    274583 4u4y:SR (3.2) BS01 rna ? GO:0001965 ... P38011 25209664
    274584 4u4y:SR (3.2) BS02 OHX ? GO:0001965 ... P38011 25209664
    274585 4u4y:c0 (3.2) BS01 rna ? GO:0000054 ... Q08745 25209664
    274586 4u4y:c1 (3.2) BS01 rna ? GO:0000028 ... P0CX47 25209664
    274587 4u4y:c2 (3.2) BS01 rna ? GO:0000028 ... P48589 25209664
    274588 4u4y:c3 (3.2) BS01 rna ? GO:0000462 ... P05756 25209664
    274589 4u4y:c3 (3.2) BS02 rna ? GO:0000462 ... P05756 25209664
    274590 4u4y:c3 (3.2) BS03 OHX ? GO:0000462 ... P05756 25209664
    274591 4u4y:c4 (3.2) BS01 rna ? GO:0000028 ... P06367 25209664
    274592 4u4y:c5 (3.2) BS01 rna ? GO:0000054 ... Q01855 25209664
    274593 4u4y:c5 (3.2) BS02 OHX ? GO:0000054 ... Q01855 25209664
    274594 4u4y:c6 (3.2) BS01 rna ? GO:0000462 ... P0CX51 25209664
    274595 4u4y:c7 (3.2) BS01 rna ? GO:0000028 ... P02407 25209664
    274596 4u4y:c8 (3.2) BS01 rna ? GO:0000054 ... P0CX55 25209664
    274597 4u4y:c9 (3.2) BS01 rna ? GO:0000054 ... P07280 25209664
    274598 4u4y:d0 (3.2) BS01 rna ? GO:0000462 ... P38701 25209664
    274599 4u4y:d2 (3.2) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    274600 4u4y:d3 (3.2) BS01 rna ? GO:0000462 ... P0CX29 25209664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).