SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    275001 4u50:C3 (3.2) BS01 rna ? GO:0000462 ... P05756 25209664
    275002 4u50:C3 (3.2) BS02 rna ? GO:0000462 ... P05756 25209664
    275003 4u50:C4 (3.2) BS01 rna ? GO:0000028 ... P06367 25209664
    275004 4u50:C5 (3.2) BS01 rna ? GO:0000054 ... Q01855 25209664
    275005 4u50:C5 (3.2) BS02 rna ? GO:0000054 ... Q01855 25209664
    275006 4u50:C5 (3.2) BS03 OHX ? GO:0000054 ... Q01855 25209664
    275007 4u50:C6 (3.2) BS01 rna ? GO:0000462 ... P0CX51 25209664
    275008 4u50:C7 (3.2) BS01 rna ? GO:0000028 ... P02407 25209664
    275009 4u50:C8 (3.2) BS01 rna ? GO:0000054 ... P0CX55 25209664
    275010 4u50:C8 (3.2) BS02 MG ? GO:0000054 ... P0CX55 25209664
    275011 4u50:C9 (3.2) BS01 rna ? GO:0000054 ... P07280 25209664
    275012 4u50:D0 (3.2) BS01 rna ? GO:0000462 ... P38701 25209664
    275013 4u50:D2 (3.2) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    275014 4u50:D3 (3.2) BS01 rna ? GO:0000462 ... P0CX29 25209664
    275015 4u50:D4 (3.2) BS01 rna ? GO:0000462 ... P0CX31 25209664
    275016 4u50:D5 (3.2) BS01 rna ? GO:0002181 ... Q3E792 25209664
    275017 4u50:D6 (3.2) BS01 rna ? GO:0003735 ... P39939 25209664
    275018 4u50:D6 (3.2) BS02 ZN ? GO:0003735 ... P39939 25209664
    275019 4u50:D7 (3.2) BS01 rna ? GO:0000028 ... P35997 25209664
    275020 4u50:D8 (3.2) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    275021 4u50:D9 (3.2) BS01 rna ? GO:0002181 ... P41057 25209664
    275022 4u50:D9 (3.2) BS02 ZN ? GO:0002181 ... P41057 25209664
    275023 4u50:D9 (3.2) BS03 OHX ? GO:0002181 ... P41057 25209664
    275024 4u50:E0 (3.2) BS01 rna ? GO:0002181 ... P0CX33 25209664
    275025 4u50:E1 (3.2) BS01 rna ? GO:0003735 ... P05759 25209664
    275026 4u50:E1 (3.2) BS02 ZN ? GO:0003735 ... P05759 25209664
    275027 4u50:L2 (3.2) BS01 rna ? GO:0002181 ... P0CX45 25209664
    275028 4u50:L2 (3.2) BS02 rna ? GO:0002181 ... P0CX45 25209664
    275029 4u50:L2 (3.2) BS03 MG ? GO:0002181 ... P0CX45 25209664
    275030 4u50:L3 (3.2) BS01 rna ? GO:0000027 ... P14126 25209664
    275031 4u50:L3 (3.2) BS02 MG ? GO:0000027 ... P14126 25209664
    275032 4u50:L3 (3.2) BS03 OHX ? GO:0000027 ... P14126 25209664
    275033 4u50:L3 (3.2) BS04 OHX ? GO:0000027 ... P14126 25209664
    275034 4u50:L4 (3.2) BS01 rna ? GO:0002181 ... P10664 25209664
    275035 4u50:L4 (3.2) BS02 rna ? GO:0002181 ... P10664 25209664
    275036 4u50:L4 (3.2) BS03 OHX ? GO:0002181 ... P10664 25209664
    275037 4u50:L5 (3.2) BS01 rna ? GO:0000027 ... P26321 25209664
    275038 4u50:L5 (3.2) BS02 rna ? GO:0000027 ... P26321 25209664
    275039 4u50:L6 (3.2) BS01 rna ? GO:0000027 ... Q02326 25209664
    275040 4u50:L7 (3.2) BS01 rna ? GO:0000463 ... P05737 25209664
    275041 4u50:L7 (3.2) BS02 rna ? GO:0000463 ... P05737 25209664
    275042 4u50:L8 (3.2) BS01 rna ? GO:0000470 ... P17076 25209664
    275043 4u50:L8 (3.2) BS02 rna ? GO:0000470 ... P17076 25209664
    275044 4u50:L9 (3.2) BS01 rna ? GO:0002181 ... P05738 25209664
    275045 4u50:M0 (3.2) BS01 rna ? GO:0000027 ... P41805 25209664
    275046 4u50:M0 (3.2) BS02 rna ? GO:0000027 ... P41805 25209664
    275047 4u50:M0 (3.2) BS03 MG ? GO:0000027 ... P41805 25209664
    275048 4u50:M1 (3.2) BS01 rna ? GO:0000027 ... Q3E757 25209664
    275049 4u50:M1 (3.2) BS02 rna ? GO:0000027 ... Q3E757 25209664
    275050 4u50:M3 (3.2) BS01 rna ? GO:0002181 ... Q12690 25209664
    275051 4u50:M3 (3.2) BS02 rna ? GO:0002181 ... Q12690 25209664
    275052 4u50:M4 (3.2) BS01 rna ? GO:0000027 ... P36105 25209664
    275053 4u50:M5 (3.2) BS01 rna ? GO:0000470 ... P05748 25209664
    275054 4u50:M5 (3.2) BS02 rna ? GO:0000470 ... P05748 25209664
    275055 4u50:M6 (3.2) BS01 rna ? GO:0000470 ... P26784 25209664
    275056 4u50:M7 (3.2) BS01 rna ? GO:0000448 ... P05740 25209664
    275057 4u50:M7 (3.2) BS02 rna ? GO:0000448 ... P05740 25209664
    275058 4u50:M7 (3.2) BS03 MG ? GO:0000448 ... P05740 25209664
    275059 4u50:M7 (3.2) BS04 OHX ? GO:0000448 ... P05740 25209664
    275060 4u50:M7 (3.2) BS05 OHX ? GO:0000448 ... P05740 25209664
    275061 4u50:M8 (3.2) BS01 rna ? GO:0002181 ... P0CX49 25209664
    275062 4u50:M9 (3.2) BS01 rna ? GO:0002181 ... P0CX82 25209664
    275063 4u50:M9 (3.2) BS02 rna ? GO:0002181 ... P0CX82 25209664
    275064 4u50:M9 (3.2) BS03 MG ? GO:0002181 ... P0CX82 25209664
    275065 4u50:M9 (3.2) BS04 MG ? GO:0002181 ... P0CX82 25209664
    275066 4u50:M9 (3.2) BS05 OHX ? GO:0002181 ... P0CX82 25209664
    275067 4u50:N0 (3.2) BS01 rna ? GO:0002181 ... P0CX23 25209664
    275068 4u50:N0 (3.2) BS02 rna ? GO:0002181 ... P0CX23 25209664
    275069 4u50:N1 (3.2) BS01 rna ? GO:0002181 ... Q02753 25209664
    275070 4u50:N1 (3.2) BS02 rna ? GO:0002181 ... Q02753 25209664
    275071 4u50:N1 (3.2) BS03 OHX ? GO:0002181 ... Q02753 25209664
    275072 4u50:N2 (3.2) BS01 rna ? GO:0002181 ... P05749 25209664
    275073 4u50:N3 (3.2) BS01 rna ? GO:0002181 ... P0CX41 25209664
    275074 4u50:N3 (3.2) BS02 rna ? GO:0002181 ... P0CX41 25209664
    275075 4u50:N4 (3.2) BS01 rna ? GO:0002181 ... P04449 25209664
    275076 4u50:N4 (3.2) BS02 rna ? GO:0002181 ... P04449 25209664
    275077 4u50:N5 (3.2) BS01 rna ? GO:0000027 ... P04456 25209664
    275078 4u50:N5 (3.2) BS02 rna ? GO:0000027 ... P04456 25209664
    275079 4u50:N6 (3.2) BS01 rna ? GO:0002181 ... P05743 25209664
    275080 4u50:N6 (3.2) BS02 rna ? GO:0002181 ... P05743 25209664
    275081 4u50:N7 (3.2) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    275082 4u50:N8 (3.2) BS01 rna ? GO:0002181 ... P02406 25209664
    275083 4u50:N9 (3.2) BS01 rna ? GO:0002181 ... P05747 25209664
    275084 4u50:N9 (3.2) BS02 OHX ? GO:0002181 ... P05747 25209664
    275085 4u50:O0 (3.2) BS01 rna ? GO:0002181 ... P14120 25209664
    275086 4u50:O1 (3.2) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    275087 4u50:O1 (3.2) BS02 OHX ? GO:0002181 ... P0C2H8 25209664
    275088 4u50:O2 (3.2) BS01 rna ? GO:0002181 ... P38061 25209664
    275089 4u50:O3 (3.2) BS01 rna ? GO:0000027 ... P05744 25209664
    275090 4u50:O3 (3.2) BS02 OHX ? GO:0000027 ... P05744 25209664
    275091 4u50:O4 (3.2) BS01 rna ? GO:0002181 ... P87262 25209664
    275092 4u50:O4 (3.2) BS02 MG ? GO:0002181 ... P87262 25209664
    275093 4u50:O5 (3.2) BS01 rna ? GO:0000463 ... P0CX84 25209664
    275094 4u50:O5 (3.2) BS02 rna ? GO:0000463 ... P0CX84 25209664
    275095 4u50:O6 (3.2) BS01 rna ? GO:0000470 ... P05745 25209664
    275096 4u50:O7 (3.2) BS01 rna ? GO:0000448 ... P49166 25209664
    275097 4u50:O7 (3.2) BS02 rna ? GO:0000448 ... P49166 25209664
    275098 4u50:O7 (3.2) BS03 OHX ? GO:0000448 ... P49166 25209664
    275099 4u50:O7 (3.2) BS04 ZN ? GO:0000448 ... P49166 25209664
    275100 4u50:O7 (3.2) BS05 OHX ? GO:0000448 ... P49166 25209664
    275101 4u50:O7 (3.2) BS06 OHX ? GO:0000448 ... P49166 25209664
    275102 4u50:O8 (3.2) BS01 rna ? GO:0002181 ... P49167 25209664
    275103 4u50:O9 (3.2) BS01 rna ? GO:0002181 ... P04650 25209664
    275104 4u50:O9 (3.2) BS02 rna ? GO:0002181 ... P04650 25209664
    275105 4u50:Q0 (3.2) BS01 rna ? GO:0003735 ... P0CH08 25209664
    275106 4u50:Q0 (3.2) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    275107 4u50:Q2 (3.2) BS01 rna ? GO:0002181 ... P0CX27 25209664
    275108 4u50:Q2 (3.2) BS02 ZN ? GO:0002181 ... P0CX27 25209664
    275109 4u50:Q2 (3.2) BS03 OHX ? GO:0002181 ... P0CX27 25209664
    275110 4u50:Q3 (3.2) BS01 rna ? GO:0002181 ... P0CX25 25209664
    275111 4u50:Q3 (3.2) BS02 ZN ? GO:0002181 ... P0CX25 25209664
    275112 4u50:S0 (3.2) BS01 rna ? GO:0000028 ... P32905 25209664
    275113 4u50:S1 (3.2) BS01 rna ? GO:0000462 ... P33442 25209664
    275114 4u50:S1 (3.2) BS02 OHX ? GO:0000462 ... P33442 25209664
    275115 4u50:S2 (3.2) BS01 rna ? GO:0000054 ... P25443 25209664
    275116 4u50:S3 (3.2) BS01 rna ? GO:0000054 ... P05750 25209664
    275117 4u50:S4 (3.2) BS01 rna ? GO:0002181 ... P0CX35 25209664
    275118 4u50:S5 (3.2) BS01 rna ? GO:0000054 ... P26783 25209664
    275119 4u50:S6 (3.2) BS01 rna ? GO:0000462 ... P0CX37 25209664
    275120 4u50:S7 (3.2) BS01 rna ? GO:0002181 ... P26786 25209664
    275121 4u50:S8 (3.2) BS01 rna ? GO:0000462 ... P0CX39 25209664
    275122 4u50:S8 (3.2) BS02 rna ? GO:0000462 ... P0CX39 25209664
    275123 4u50:S9 (3.2) BS01 rna ? GO:0000462 ... O13516 25209664
    275124 4u50:SM (3.2) BS01 rna ? GO:0000723 ... P39015 25209664
    275125 4u50:SM (3.2) BS02 rna ? GO:0000723 ... P39015 25209664
    275126 4u50:SR (3.2) BS01 rna ? GO:0001965 ... P38011 25209664
    275127 4u50:SR (3.2) BS02 OHX ? GO:0001965 ... P38011 25209664
    275128 4u50:c0 (3.2) BS01 rna ? GO:0000054 ... Q08745 25209664
    275129 4u50:c1 (3.2) BS01 rna ? GO:0000028 ... P0CX47 25209664
    275130 4u50:c2 (3.2) BS01 rna ? GO:0000028 ... P48589 25209664
    275131 4u50:c3 (3.2) BS01 rna ? GO:0000462 ... P05756 25209664
    275132 4u50:c3 (3.2) BS02 rna ? GO:0000462 ... P05756 25209664
    275133 4u50:c4 (3.2) BS01 rna ? GO:0000028 ... P06367 25209664
    275134 4u50:c5 (3.2) BS01 rna ? GO:0000054 ... Q01855 25209664
    275135 4u50:c5 (3.2) BS02 OHX ? GO:0000054 ... Q01855 25209664
    275136 4u50:c6 (3.2) BS01 rna ? GO:0000462 ... P0CX51 25209664
    275137 4u50:c7 (3.2) BS01 rna ? GO:0000028 ... P02407 25209664
    275138 4u50:c8 (3.2) BS01 rna ? GO:0000054 ... P0CX55 25209664
    275139 4u50:c9 (3.2) BS01 rna ? GO:0000054 ... P07280 25209664
    275140 4u50:c9 (3.2) BS02 MG ? GO:0000054 ... P07280 25209664
    275141 4u50:d0 (3.2) BS01 rna ? GO:0000462 ... P38701 25209664
    275142 4u50:d1 (3.2) BS01 rna ? GO:0000447 ... P0C0V8 25209664
    275143 4u50:d2 (3.2) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    275144 4u50:d3 (3.2) BS01 rna ? GO:0000462 ... P0CX29 25209664
    275145 4u50:d3 (3.2) BS02 MG ? GO:0000462 ... P0CX29 25209664
    275146 4u50:d4 (3.2) BS01 rna ? GO:0000462 ... P0CX31 25209664
    275147 4u50:d5 (3.2) BS01 rna ? GO:0002181 ... Q3E792 25209664
    275148 4u50:d6 (3.2) BS01 rna ? GO:0003735 ... P39939 25209664
    275149 4u50:d6 (3.2) BS02 ZN ? GO:0003735 ... P39939 25209664
    275150 4u50:d7 (3.2) BS01 rna ? GO:0000028 ... P35997 25209664
    275151 4u50:d8 (3.2) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    275152 4u50:d9 (3.2) BS01 rna ? GO:0002181 ... P41057 25209664
    275153 4u50:d9 (3.2) BS02 ZN ? GO:0002181 ... P41057 25209664
    275154 4u50:e0 (3.2) BS01 rna ? GO:0002181 ... P0CX33 25209664
    275155 4u50:e1 (3.2) BS01 rna ? GO:0003735 ... P05759 25209664
    275156 4u50:l2 (3.2) BS01 rna ? GO:0002181 ... P0CX45 25209664
    275157 4u50:l2 (3.2) BS02 rna ? GO:0002181 ... P0CX45 25209664
    275158 4u50:l2 (3.2) BS03 MG ? GO:0002181 ... P0CX45 25209664
    275159 4u50:l3 (3.2) BS01 rna ? GO:0000027 ... P14126 25209664
    275160 4u50:l3 (3.2) BS02 MG ? GO:0000027 ... P14126 25209664
    275161 4u50:l3 (3.2) BS03 OHX ? GO:0000027 ... P14126 25209664
    275162 4u50:l3 (3.2) BS04 OHX ? GO:0000027 ... P14126 25209664
    275163 4u50:l4 (3.2) BS01 rna ? GO:0002181 ... P10664 25209664
    275164 4u50:l4 (3.2) BS02 rna ? GO:0002181 ... P10664 25209664
    275165 4u50:l4 (3.2) BS03 OHX ? GO:0002181 ... P10664 25209664
    275166 4u50:l5 (3.2) BS01 rna ? GO:0000027 ... P26321 25209664
    275167 4u50:l5 (3.2) BS02 rna ? GO:0000027 ... P26321 25209664
    275168 4u50:l5 (3.2) BS03 OHX ? GO:0000027 ... P26321 25209664
    275169 4u50:l5 (3.2) BS04 OHX ? GO:0000027 ... P26321 25209664
    275170 4u50:l6 (3.2) BS01 rna ? GO:0000027 ... Q02326 25209664
    275171 4u50:l7 (3.2) BS01 rna ? GO:0000463 ... P05737 25209664
    275172 4u50:l7 (3.2) BS02 rna ? GO:0000463 ... P05737 25209664
    275173 4u50:l7 (3.2) BS03 OHX ? GO:0000463 ... P05737 25209664
    275174 4u50:l8 (3.2) BS01 rna ? GO:0000470 ... P17076 25209664
    275175 4u50:l8 (3.2) BS02 rna ? GO:0000470 ... P17076 25209664
    275176 4u50:l9 (3.2) BS01 rna ? GO:0002181 ... P05738 25209664
    275177 4u50:l9 (3.2) BS02 OHX ? GO:0002181 ... P05738 25209664
    275178 4u50:m0 (3.2) BS01 rna ? GO:0000027 ... P41805 25209664
    275179 4u50:m0 (3.2) BS02 rna ? GO:0000027 ... P41805 25209664
    275180 4u50:m0 (3.2) BS03 OHX ? GO:0000027 ... P41805 25209664
    275181 4u50:m0 (3.2) BS04 OHX ? GO:0000027 ... P41805 25209664
    275182 4u50:m1 (3.2) BS01 rna ? GO:0000027 ... Q3E757 25209664
    275183 4u50:m1 (3.2) BS02 rna ? GO:0000027 ... Q3E757 25209664
    275184 4u50:m1 (3.2) BS03 OHX ? GO:0000027 ... Q3E757 25209664
    275185 4u50:m2 (3.2) BS01 rna N/A N/A N/A 25209664
    275186 4u50:m3 (3.2) BS01 rna ? GO:0002181 ... Q12690 25209664
    275187 4u50:m3 (3.2) BS02 rna ? GO:0002181 ... Q12690 25209664
    275188 4u50:m4 (3.2) BS01 rna ? GO:0000027 ... P36105 25209664
    275189 4u50:m5 (3.2) BS01 rna ? GO:0000470 ... P05748 25209664
    275190 4u50:m5 (3.2) BS02 rna ? GO:0000470 ... P05748 25209664
    275191 4u50:m5 (3.2) BS03 OHX ? GO:0000470 ... P05748 25209664
    275192 4u50:m6 (3.2) BS01 rna ? GO:0000470 ... P26784 25209664
    275193 4u50:m6 (3.2) BS02 MG ? GO:0000470 ... P26784 25209664
    275194 4u50:m7 (3.2) BS01 rna ? GO:0000448 ... P05740 25209664
    275195 4u50:m7 (3.2) BS02 rna ? GO:0000448 ... P05740 25209664
    275196 4u50:m7 (3.2) BS03 OHX ? GO:0000448 ... P05740 25209664
    275197 4u50:m8 (3.2) BS01 rna ? GO:0002181 ... P0CX49 25209664
    275198 4u50:m9 (3.2) BS01 rna ? GO:0002181 ... P0CX82 25209664
    275199 4u50:m9 (3.2) BS02 rna ? GO:0002181 ... P0CX82 25209664
    275200 4u50:n0 (3.2) BS01 rna ? GO:0002181 ... P0CX23 25209664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).