SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    275201 4u50:n0 (3.2) BS02 rna ? GO:0002181 ... P0CX23 25209664
    275202 4u50:n1 (3.2) BS01 rna ? GO:0002181 ... Q02753 25209664
    275203 4u50:n1 (3.2) BS02 rna ? GO:0002181 ... Q02753 25209664
    275204 4u50:n1 (3.2) BS03 OHX ? GO:0002181 ... Q02753 25209664
    275205 4u50:n2 (3.2) BS01 rna ? GO:0002181 ... P05749 25209664
    275206 4u50:n3 (3.2) BS01 rna ? GO:0002181 ... P0CX41 25209664
    275207 4u50:n3 (3.2) BS02 rna ? GO:0002181 ... P0CX41 25209664
    275208 4u50:n3 (3.2) BS03 MG ? GO:0002181 ... P0CX41 25209664
    275209 4u50:n4 (3.2) BS01 rna ? GO:0002181 ... P04449 25209664
    275210 4u50:n4 (3.2) BS02 rna ? GO:0002181 ... P04449 25209664
    275211 4u50:n5 (3.2) BS01 rna ? GO:0000027 ... P04456 25209664
    275212 4u50:n5 (3.2) BS02 rna ? GO:0000027 ... P04456 25209664
    275213 4u50:n6 (3.2) BS01 rna ? GO:0002181 ... P05743 25209664
    275214 4u50:n6 (3.2) BS02 rna ? GO:0002181 ... P05743 25209664
    275215 4u50:n6 (3.2) BS03 OHX ? GO:0002181 ... P05743 25209664
    275216 4u50:n7 (3.2) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    275217 4u50:n7 (3.2) BS02 OHX ? GO:0002181 ... P0C2H6 25209664
    275218 4u50:n8 (3.2) BS01 rna ? GO:0002181 ... P02406 25209664
    275219 4u50:n8 (3.2) BS02 OHX ? GO:0002181 ... P02406 25209664
    275220 4u50:n9 (3.2) BS01 rna ? GO:0002181 ... P05747 25209664
    275221 4u50:n9 (3.2) BS02 OHX ? GO:0002181 ... P05747 25209664
    275222 4u50:o0 (3.2) BS01 rna ? GO:0002181 ... P14120 25209664
    275223 4u50:o1 (3.2) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    275224 4u50:o2 (3.2) BS01 rna ? GO:0002181 ... P38061 25209664
    275225 4u50:o2 (3.2) BS02 OHX ? GO:0002181 ... P38061 25209664
    275226 4u50:o3 (3.2) BS01 rna ? GO:0000027 ... P05744 25209664
    275227 4u50:o3 (3.2) BS02 MG ? GO:0000027 ... P05744 25209664
    275228 4u50:o3 (3.2) BS03 OHX ? GO:0000027 ... P05744 25209664
    275229 4u50:o4 (3.2) BS01 rna ? GO:0002181 ... P87262 25209664
    275230 4u50:o4 (3.2) BS02 MG ? GO:0002181 ... P87262 25209664
    275231 4u50:o5 (3.2) BS01 rna ? GO:0000463 ... P0CX84 25209664
    275232 4u50:o5 (3.2) BS02 rna ? GO:0000463 ... P0CX84 25209664
    275233 4u50:o6 (3.2) BS01 rna ? GO:0000470 ... P05745 25209664
    275234 4u50:o7 (3.2) BS01 rna ? GO:0000448 ... P49166 25209664
    275235 4u50:o7 (3.2) BS02 rna ? GO:0000448 ... P49166 25209664
    275236 4u50:o7 (3.2) BS03 ZN ? GO:0000448 ... P49166 25209664
    275237 4u50:o7 (3.2) BS04 OHX ? GO:0000448 ... P49166 25209664
    275238 4u50:o7 (3.2) BS05 OHX ? GO:0000448 ... P49166 25209664
    275239 4u50:o8 (3.2) BS01 rna ? GO:0002181 ... P49167 25209664
    275240 4u50:o9 (3.2) BS01 rna ? GO:0002181 ... P04650 25209664
    275241 4u50:o9 (3.2) BS02 rna ? GO:0002181 ... P04650 25209664
    275242 4u50:p0 (3.2) BS01 rna ? GO:0000027 ... P05317 25209664
    275243 4u50:q0 (3.2) BS01 rna ? GO:0003735 ... P0CH08 25209664
    275244 4u50:q0 (3.2) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    275245 4u50:q2 (3.2) BS01 rna ? GO:0002181 ... P0CX27 25209664
    275246 4u50:q2 (3.2) BS02 ZN ? GO:0002181 ... P0CX27 25209664
    275247 4u50:q2 (3.2) BS03 OHX ? GO:0002181 ... P0CX27 25209664
    275248 4u50:q3 (3.2) BS01 rna ? GO:0002181 ... P0CX25 25209664
    275249 4u50:q3 (3.2) BS02 rna ? GO:0002181 ... P0CX25 25209664
    275250 4u50:q3 (3.2) BS03 ZN ? GO:0002181 ... P0CX25 25209664
    275251 4u50:s0 (3.2) BS01 rna ? GO:0000028 ... P32905 25209664
    275252 4u50:s1 (3.2) BS01 rna ? GO:0000462 ... P33442 25209664
    275253 4u50:s1 (3.2) BS02 OHX ? GO:0000462 ... P33442 25209664
    275254 4u50:s2 (3.2) BS01 rna ? GO:0000054 ... P25443 25209664
    275255 4u50:s3 (3.2) BS01 rna ? GO:0000054 ... P05750 25209664
    275256 4u50:s4 (3.2) BS01 rna ? GO:0002181 ... P0CX35 25209664
    275257 4u50:s4 (3.2) BS02 MG ? GO:0002181 ... P0CX35 25209664
    275258 4u50:s5 (3.2) BS01 rna ? GO:0000054 ... P26783 25209664
    275259 4u50:s6 (3.2) BS01 rna ? GO:0000462 ... P0CX37 25209664
    275260 4u50:s7 (3.2) BS01 rna ? GO:0002181 ... P26786 25209664
    275261 4u50:s8 (3.2) BS01 rna ? GO:0000462 ... P0CX39 25209664
    275262 4u50:s8 (3.2) BS02 rna ? GO:0000462 ... P0CX39 25209664
    275263 4u50:s9 (3.2) BS01 rna ? GO:0000462 ... O13516 25209664
    275264 4u50:sM (3.2) BS01 rna ? GO:0000723 ... P39015 25209664
    275265 4u50:sM (3.2) BS02 rna ? GO:0000723 ... P39015 25209664
    275266 4u50:sR (3.2) BS01 rna ? GO:0001965 ... P38011 25209664
    275267 4u51:C0 (3.2) BS01 rna ? GO:0000054 ... Q08745 25209664
    275268 4u51:C1 (3.2) BS01 rna ? GO:0000028 ... P0CX47 25209664
    275269 4u51:C2 (3.2) BS01 rna ? GO:0000028 ... P48589 25209664
    275270 4u51:C3 (3.2) BS01 rna ? GO:0000462 ... P05756 25209664
    275271 4u51:C3 (3.2) BS02 rna ? GO:0000462 ... P05756 25209664
    275272 4u51:C3 (3.2) BS03 OHX ? GO:0000462 ... P05756 25209664
    275273 4u51:C4 (3.2) BS01 rna ? GO:0000028 ... P06367 25209664
    275274 4u51:C5 (3.2) BS01 rna ? GO:0000054 ... Q01855 25209664
    275275 4u51:C5 (3.2) BS02 rna ? GO:0000054 ... Q01855 25209664
    275276 4u51:C5 (3.2) BS03 OHX ? GO:0000054 ... Q01855 25209664
    275277 4u51:C6 (3.2) BS01 rna ? GO:0000462 ... P0CX51 25209664
    275278 4u51:C7 (3.2) BS01 rna ? GO:0000028 ... P02407 25209664
    275279 4u51:C8 (3.2) BS01 rna ? GO:0000054 ... P0CX55 25209664
    275280 4u51:C8 (3.2) BS02 MG ? GO:0000054 ... P0CX55 25209664
    275281 4u51:C8 (3.2) BS03 MG ? GO:0000054 ... P0CX55 25209664
    275282 4u51:C8 (3.2) BS04 OHX ? GO:0000054 ... P0CX55 25209664
    275283 4u51:C9 (3.2) BS01 rna ? GO:0000054 ... P07280 25209664
    275284 4u51:D0 (3.2) BS01 rna ? GO:0000462 ... P38701 25209664
    275285 4u51:D2 (3.2) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    275286 4u51:D3 (3.2) BS01 rna ? GO:0000462 ... P0CX29 25209664
    275287 4u51:D4 (3.2) BS01 rna ? GO:0000462 ... P0CX31 25209664
    275288 4u51:D5 (3.2) BS01 rna ? GO:0002181 ... Q3E792 25209664
    275289 4u51:D6 (3.2) BS01 rna ? GO:0003735 ... P39939 25209664
    275290 4u51:D6 (3.2) BS02 ZN ? GO:0003735 ... P39939 25209664
    275291 4u51:D7 (3.2) BS01 rna ? GO:0000028 ... P35997 25209664
    275292 4u51:D8 (3.2) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    275293 4u51:D9 (3.2) BS01 rna ? GO:0002181 ... P41057 25209664
    275294 4u51:D9 (3.2) BS02 ZN ? GO:0002181 ... P41057 25209664
    275295 4u51:E0 (3.2) BS01 rna ? GO:0002181 ... P0CX33 25209664
    275296 4u51:E1 (3.2) BS01 rna ? GO:0003735 ... P05759 25209664
    275297 4u51:E1 (3.2) BS02 ZN ? GO:0003735 ... P05759 25209664
    275298 4u51:L2 (3.2) BS01 rna ? GO:0002181 ... P0CX45 25209664
    275299 4u51:L2 (3.2) BS02 rna ? GO:0002181 ... P0CX45 25209664
    275300 4u51:L2 (3.2) BS03 MG ? GO:0002181 ... P0CX45 25209664
    275301 4u51:L3 (3.2) BS01 rna ? GO:0000027 ... P14126 25209664
    275302 4u51:L3 (3.2) BS02 MG ? GO:0000027 ... P14126 25209664
    275303 4u51:L3 (3.2) BS03 OHX ? GO:0000027 ... P14126 25209664
    275304 4u51:L4 (3.2) BS01 rna ? GO:0002181 ... P10664 25209664
    275305 4u51:L4 (3.2) BS02 rna ? GO:0002181 ... P10664 25209664
    275306 4u51:L4 (3.2) BS03 OHX ? GO:0002181 ... P10664 25209664
    275307 4u51:L5 (3.2) BS01 rna ? GO:0000027 ... P26321 25209664
    275308 4u51:L5 (3.2) BS02 rna ? GO:0000027 ... P26321 25209664
    275309 4u51:L5 (3.2) BS03 MG ? GO:0000027 ... P26321 25209664
    275310 4u51:L6 (3.2) BS01 rna ? GO:0000027 ... Q02326 25209664
    275311 4u51:L7 (3.2) BS01 rna ? GO:0000463 ... P05737 25209664
    275312 4u51:L7 (3.2) BS02 rna ? GO:0000463 ... P05737 25209664
    275313 4u51:L8 (3.2) BS01 rna ? GO:0000470 ... P17076 25209664
    275314 4u51:L8 (3.2) BS02 rna ? GO:0000470 ... P17076 25209664
    275315 4u51:L9 (3.2) BS01 rna ? GO:0002181 ... P05738 25209664
    275316 4u51:M0 (3.2) BS01 rna ? GO:0000027 ... P41805 25209664
    275317 4u51:M0 (3.2) BS02 rna ? GO:0000027 ... P41805 25209664
    275318 4u51:M1 (3.2) BS01 rna ? GO:0000027 ... Q3E757 25209664
    275319 4u51:M1 (3.2) BS02 rna ? GO:0000027 ... Q3E757 25209664
    275320 4u51:M1 (3.2) BS03 MG ? GO:0000027 ... Q3E757 25209664
    275321 4u51:M3 (3.2) BS01 rna ? GO:0002181 ... Q12690 25209664
    275322 4u51:M3 (3.2) BS02 rna ? GO:0002181 ... Q12690 25209664
    275323 4u51:M4 (3.2) BS01 rna ? GO:0000027 ... P36105 25209664
    275324 4u51:M5 (3.2) BS01 rna ? GO:0000470 ... P05748 25209664
    275325 4u51:M5 (3.2) BS02 rna ? GO:0000470 ... P05748 25209664
    275326 4u51:M5 (3.2) BS03 OHX ? GO:0000470 ... P05748 25209664
    275327 4u51:M6 (3.2) BS01 rna ? GO:0000470 ... P26784 25209664
    275328 4u51:M7 (3.2) BS01 rna ? GO:0000448 ... P05740 25209664
    275329 4u51:M7 (3.2) BS02 rna ? GO:0000448 ... P05740 25209664
    275330 4u51:M7 (3.2) BS03 MG ? GO:0000448 ... P05740 25209664
    275331 4u51:M7 (3.2) BS04 OHX ? GO:0000448 ... P05740 25209664
    275332 4u51:M8 (3.2) BS01 rna ? GO:0002181 ... P0CX49 25209664
    275333 4u51:M9 (3.2) BS01 rna ? GO:0002181 ... P0CX82 25209664
    275334 4u51:M9 (3.2) BS02 rna ? GO:0002181 ... P0CX82 25209664
    275335 4u51:M9 (3.2) BS03 MG ? GO:0002181 ... P0CX82 25209664
    275336 4u51:M9 (3.2) BS04 OHX ? GO:0002181 ... P0CX82 25209664
    275337 4u51:N0 (3.2) BS01 rna ? GO:0002181 ... P0CX23 25209664
    275338 4u51:N0 (3.2) BS02 rna ? GO:0002181 ... P0CX23 25209664
    275339 4u51:N1 (3.2) BS01 rna ? GO:0002181 ... Q02753 25209664
    275340 4u51:N1 (3.2) BS02 rna ? GO:0002181 ... Q02753 25209664
    275341 4u51:N1 (3.2) BS03 OHX ? GO:0002181 ... Q02753 25209664
    275342 4u51:N2 (3.2) BS01 rna ? GO:0002181 ... P05749 25209664
    275343 4u51:N3 (3.2) BS01 rna ? GO:0002181 ... P0CX41 25209664
    275344 4u51:N3 (3.2) BS02 rna ? GO:0002181 ... P0CX41 25209664
    275345 4u51:N4 (3.2) BS01 rna ? GO:0002181 ... P04449 25209664
    275346 4u51:N4 (3.2) BS02 rna ? GO:0002181 ... P04449 25209664
    275347 4u51:N5 (3.2) BS01 rna ? GO:0000027 ... P04456 25209664
    275348 4u51:N5 (3.2) BS02 rna ? GO:0000027 ... P04456 25209664
    275349 4u51:N6 (3.2) BS01 rna ? GO:0002181 ... P05743 25209664
    275350 4u51:N6 (3.2) BS02 rna ? GO:0002181 ... P05743 25209664
    275351 4u51:N7 (3.2) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    275352 4u51:N8 (3.2) BS01 rna ? GO:0002181 ... P02406 25209664
    275353 4u51:N8 (3.2) BS02 MG ? GO:0002181 ... P02406 25209664
    275354 4u51:N9 (3.2) BS01 rna ? GO:0002181 ... P05747 25209664
    275355 4u51:N9 (3.2) BS02 OHX ? GO:0002181 ... P05747 25209664
    275356 4u51:O0 (3.2) BS01 rna ? GO:0002181 ... P14120 25209664
    275357 4u51:O1 (3.2) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    275358 4u51:O1 (3.2) BS02 OHX ? GO:0002181 ... P0C2H8 25209664
    275359 4u51:O2 (3.2) BS01 rna ? GO:0002181 ... P38061 25209664
    275360 4u51:O3 (3.2) BS01 rna ? GO:0000027 ... P05744 25209664
    275361 4u51:O3 (3.2) BS02 OHX ? GO:0000027 ... P05744 25209664
    275362 4u51:O4 (3.2) BS01 rna ? GO:0002181 ... P87262 25209664
    275363 4u51:O4 (3.2) BS02 MG ? GO:0002181 ... P87262 25209664
    275364 4u51:O5 (3.2) BS01 rna ? GO:0000463 ... P0CX84 25209664
    275365 4u51:O5 (3.2) BS02 rna ? GO:0000463 ... P0CX84 25209664
    275366 4u51:O6 (3.2) BS01 rna ? GO:0000470 ... P05745 25209664
    275367 4u51:O7 (3.2) BS01 rna ? GO:0000448 ... P49166 25209664
    275368 4u51:O7 (3.2) BS02 rna ? GO:0000448 ... P49166 25209664
    275369 4u51:O7 (3.2) BS03 OHX ? GO:0000448 ... P49166 25209664
    275370 4u51:O7 (3.2) BS04 ZN ? GO:0000448 ... P49166 25209664
    275371 4u51:O7 (3.2) BS05 OHX ? GO:0000448 ... P49166 25209664
    275372 4u51:O8 (3.2) BS01 rna ? GO:0002181 ... P49167 25209664
    275373 4u51:O9 (3.2) BS01 rna ? GO:0002181 ... P04650 25209664
    275374 4u51:O9 (3.2) BS02 rna ? GO:0002181 ... P04650 25209664
    275375 4u51:Q0 (3.2) BS01 rna ? GO:0003735 ... P0CH08 25209664
    275376 4u51:Q0 (3.2) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    275377 4u51:Q2 (3.2) BS01 rna ? GO:0002181 ... P0CX27 25209664
    275378 4u51:Q2 (3.2) BS02 ZN ? GO:0002181 ... P0CX27 25209664
    275379 4u51:Q2 (3.2) BS03 OHX ? GO:0002181 ... P0CX27 25209664
    275380 4u51:Q3 (3.2) BS01 rna ? GO:0002181 ... P0CX25 25209664
    275381 4u51:Q3 (3.2) BS02 ZN ? GO:0002181 ... P0CX25 25209664
    275382 4u51:S0 (3.2) BS01 rna ? GO:0000028 ... P32905 25209664
    275383 4u51:S1 (3.2) BS01 rna ? GO:0000462 ... P33442 25209664
    275384 4u51:S1 (3.2) BS02 OHX ? GO:0000462 ... P33442 25209664
    275385 4u51:S2 (3.2) BS01 rna ? GO:0000054 ... P25443 25209664
    275386 4u51:S3 (3.2) BS01 rna ? GO:0000054 ... P05750 25209664
    275387 4u51:S4 (3.2) BS01 rna ? GO:0002181 ... P0CX35 25209664
    275388 4u51:S4 (3.2) BS02 MG ? GO:0002181 ... P0CX35 25209664
    275389 4u51:S5 (3.2) BS01 rna ? GO:0000054 ... P26783 25209664
    275390 4u51:S6 (3.2) BS01 rna ? GO:0000462 ... P0CX37 25209664
    275391 4u51:S7 (3.2) BS01 rna ? GO:0002181 ... P26786 25209664
    275392 4u51:S8 (3.2) BS01 rna ? GO:0000462 ... P0CX39 25209664
    275393 4u51:S8 (3.2) BS02 rna ? GO:0000462 ... P0CX39 25209664
    275394 4u51:S8 (3.2) BS03 OHX ? GO:0000462 ... P0CX39 25209664
    275395 4u51:S9 (3.2) BS01 rna ? GO:0000462 ... O13516 25209664
    275396 4u51:SM (3.2) BS01 rna ? GO:0000723 ... P39015 25209664
    275397 4u51:SM (3.2) BS02 rna ? GO:0000723 ... P39015 25209664
    275398 4u51:SR (3.2) BS01 rna ? GO:0001965 ... P38011 25209664
    275399 4u51:SR (3.2) BS02 OHX ? GO:0001965 ... P38011 25209664
    275400 4u51:c0 (3.2) BS01 rna ? GO:0000054 ... Q08745 25209664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).