SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1368 1369 1370 1371 1372 1373 1374 1375 1376 1377 1378 1379 1380 1381 1382 1383 1384 1385 1386 1387 1388 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    275401 4u51:c1 (3.2) BS01 rna ? GO:0000028 ... P0CX47 25209664
    275402 4u51:c2 (3.2) BS01 rna ? GO:0000028 ... P48589 25209664
    275403 4u51:c3 (3.2) BS01 rna ? GO:0000462 ... P05756 25209664
    275404 4u51:c3 (3.2) BS02 rna ? GO:0000462 ... P05756 25209664
    275405 4u51:c3 (3.2) BS03 OHX ? GO:0000462 ... P05756 25209664
    275406 4u51:c4 (3.2) BS01 rna ? GO:0000028 ... P06367 25209664
    275407 4u51:c5 (3.2) BS01 rna ? GO:0000054 ... Q01855 25209664
    275408 4u51:c5 (3.2) BS02 OHX ? GO:0000054 ... Q01855 25209664
    275409 4u51:c6 (3.2) BS01 rna ? GO:0000462 ... P0CX51 25209664
    275410 4u51:c7 (3.2) BS01 rna ? GO:0000028 ... P02407 25209664
    275411 4u51:c8 (3.2) BS01 rna ? GO:0000054 ... P0CX55 25209664
    275412 4u51:c9 (3.2) BS01 rna ? GO:0000054 ... P07280 25209664
    275413 4u51:c9 (3.2) BS02 MG ? GO:0000054 ... P07280 25209664
    275414 4u51:d0 (3.2) BS01 rna ? GO:0000462 ... P38701 25209664
    275415 4u51:d2 (3.2) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    275416 4u51:d3 (3.2) BS01 rna ? GO:0000462 ... P0CX29 25209664
    275417 4u51:d4 (3.2) BS01 rna ? GO:0000462 ... P0CX31 25209664
    275418 4u51:d5 (3.2) BS01 rna ? GO:0002181 ... Q3E792 25209664
    275419 4u51:d6 (3.2) BS01 rna ? GO:0003735 ... P39939 25209664
    275420 4u51:d6 (3.2) BS02 ZN ? GO:0003735 ... P39939 25209664
    275421 4u51:d6 (3.2) BS03 MG ? GO:0003735 ... P39939 25209664
    275422 4u51:d7 (3.2) BS01 rna ? GO:0000028 ... P35997 25209664
    275423 4u51:d8 (3.2) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    275424 4u51:d9 (3.2) BS01 rna ? GO:0002181 ... P41057 25209664
    275425 4u51:d9 (3.2) BS02 ZN ? GO:0002181 ... P41057 25209664
    275426 4u51:e0 (3.2) BS01 rna ? GO:0002181 ... P0CX33 25209664
    275427 4u51:e1 (3.2) BS01 rna ? GO:0003735 ... P05759 25209664
    275428 4u51:l2 (3.2) BS01 rna ? GO:0002181 ... P0CX45 25209664
    275429 4u51:l2 (3.2) BS02 rna ? GO:0002181 ... P0CX45 25209664
    275430 4u51:l2 (3.2) BS03 MG ? GO:0002181 ... P0CX45 25209664
    275431 4u51:l3 (3.2) BS01 rna ? GO:0000027 ... P14126 25209664
    275432 4u51:l3 (3.2) BS02 MG ? GO:0000027 ... P14126 25209664
    275433 4u51:l3 (3.2) BS03 OHX ? GO:0000027 ... P14126 25209664
    275434 4u51:l4 (3.2) BS01 rna ? GO:0002181 ... P10664 25209664
    275435 4u51:l4 (3.2) BS02 rna ? GO:0002181 ... P10664 25209664
    275436 4u51:l5 (3.2) BS01 rna ? GO:0000027 ... P26321 25209664
    275437 4u51:l5 (3.2) BS02 rna ? GO:0000027 ... P26321 25209664
    275438 4u51:l5 (3.2) BS03 MG ? GO:0000027 ... P26321 25209664
    275439 4u51:l5 (3.2) BS04 OHX ? GO:0000027 ... P26321 25209664
    275440 4u51:l5 (3.2) BS05 OHX ? GO:0000027 ... P26321 25209664
    275441 4u51:l6 (3.2) BS01 rna ? GO:0000027 ... Q02326 25209664
    275442 4u51:l7 (3.2) BS01 rna ? GO:0000463 ... P05737 25209664
    275443 4u51:l7 (3.2) BS02 rna ? GO:0000463 ... P05737 25209664
    275444 4u51:l7 (3.2) BS03 OHX ? GO:0000463 ... P05737 25209664
    275445 4u51:l8 (3.2) BS01 rna ? GO:0000470 ... P17076 25209664
    275446 4u51:l8 (3.2) BS02 rna ? GO:0000470 ... P17076 25209664
    275447 4u51:l9 (3.2) BS01 rna ? GO:0002181 ... P05738 25209664
    275448 4u51:m0 (3.2) BS01 rna ? GO:0000027 ... P41805 25209664
    275449 4u51:m0 (3.2) BS02 rna ? GO:0000027 ... P41805 25209664
    275450 4u51:m0 (3.2) BS03 OHX ? GO:0000027 ... P41805 25209664
    275451 4u51:m0 (3.2) BS04 OHX ? GO:0000027 ... P41805 25209664
    275452 4u51:m1 (3.2) BS01 rna ? GO:0000027 ... Q3E757 25209664
    275453 4u51:m1 (3.2) BS02 rna ? GO:0000027 ... Q3E757 25209664
    275454 4u51:m2 (3.2) BS01 rna N/A N/A N/A 25209664
    275455 4u51:m3 (3.2) BS01 rna ? GO:0002181 ... Q12690 25209664
    275456 4u51:m3 (3.2) BS02 rna ? GO:0002181 ... Q12690 25209664
    275457 4u51:m4 (3.2) BS01 rna ? GO:0000027 ... P36105 25209664
    275458 4u51:m5 (3.2) BS01 rna ? GO:0000470 ... P05748 25209664
    275459 4u51:m5 (3.2) BS02 rna ? GO:0000470 ... P05748 25209664
    275460 4u51:m5 (3.2) BS03 OHX ? GO:0000470 ... P05748 25209664
    275461 4u51:m6 (3.2) BS01 rna ? GO:0000470 ... P26784 25209664
    275462 4u51:m6 (3.2) BS02 MG ? GO:0000470 ... P26784 25209664
    275463 4u51:m7 (3.2) BS01 rna ? GO:0000448 ... P05740 25209664
    275464 4u51:m7 (3.2) BS02 rna ? GO:0000448 ... P05740 25209664
    275465 4u51:m7 (3.2) BS03 OHX ? GO:0000448 ... P05740 25209664
    275466 4u51:m8 (3.2) BS01 rna ? GO:0002181 ... P0CX49 25209664
    275467 4u51:m9 (3.2) BS01 rna ? GO:0002181 ... P0CX82 25209664
    275468 4u51:m9 (3.2) BS02 rna ? GO:0002181 ... P0CX82 25209664
    275469 4u51:m9 (3.2) BS03 OHX ? GO:0002181 ... P0CX82 25209664
    275470 4u51:n0 (3.2) BS01 rna ? GO:0002181 ... P0CX23 25209664
    275471 4u51:n0 (3.2) BS02 rna ? GO:0002181 ... P0CX23 25209664
    275472 4u51:n1 (3.2) BS01 rna ? GO:0002181 ... Q02753 25209664
    275473 4u51:n1 (3.2) BS02 rna ? GO:0002181 ... Q02753 25209664
    275474 4u51:n1 (3.2) BS03 OHX ? GO:0002181 ... Q02753 25209664
    275475 4u51:n2 (3.2) BS01 rna ? GO:0002181 ... P05749 25209664
    275476 4u51:n3 (3.2) BS01 rna ? GO:0002181 ... P0CX41 25209664
    275477 4u51:n3 (3.2) BS02 rna ? GO:0002181 ... P0CX41 25209664
    275478 4u51:n3 (3.2) BS03 MG ? GO:0002181 ... P0CX41 25209664
    275479 4u51:n4 (3.2) BS01 rna ? GO:0002181 ... P04449 25209664
    275480 4u51:n4 (3.2) BS02 rna ? GO:0002181 ... P04449 25209664
    275481 4u51:n5 (3.2) BS01 rna ? GO:0000027 ... P04456 25209664
    275482 4u51:n5 (3.2) BS02 rna ? GO:0000027 ... P04456 25209664
    275483 4u51:n6 (3.2) BS01 rna ? GO:0002181 ... P05743 25209664
    275484 4u51:n6 (3.2) BS02 rna ? GO:0002181 ... P05743 25209664
    275485 4u51:n7 (3.2) BS01 rna ? GO:0002181 ... P0C2H6 25209664
    275486 4u51:n8 (3.2) BS01 rna ? GO:0002181 ... P02406 25209664
    275487 4u51:n8 (3.2) BS02 OHX ? GO:0002181 ... P02406 25209664
    275488 4u51:n9 (3.2) BS01 rna ? GO:0002181 ... P05747 25209664
    275489 4u51:n9 (3.2) BS02 OHX ? GO:0002181 ... P05747 25209664
    275490 4u51:o0 (3.2) BS01 rna ? GO:0002181 ... P14120 25209664
    275491 4u51:o1 (3.2) BS01 rna ? GO:0002181 ... P0C2H8 25209664
    275492 4u51:o2 (3.2) BS01 rna ? GO:0002181 ... P38061 25209664
    275493 4u51:o3 (3.2) BS01 rna ? GO:0000027 ... P05744 25209664
    275494 4u51:o3 (3.2) BS02 MG ? GO:0000027 ... P05744 25209664
    275495 4u51:o3 (3.2) BS03 OHX ? GO:0000027 ... P05744 25209664
    275496 4u51:o4 (3.2) BS01 rna ? GO:0002181 ... P87262 25209664
    275497 4u51:o5 (3.2) BS01 rna ? GO:0000463 ... P0CX84 25209664
    275498 4u51:o5 (3.2) BS02 rna ? GO:0000463 ... P0CX84 25209664
    275499 4u51:o6 (3.2) BS01 rna ? GO:0000470 ... P05745 25209664
    275500 4u51:o7 (3.2) BS01 rna ? GO:0000448 ... P49166 25209664
    275501 4u51:o7 (3.2) BS02 rna ? GO:0000448 ... P49166 25209664
    275502 4u51:o7 (3.2) BS03 OHX ? GO:0000448 ... P49166 25209664
    275503 4u51:o7 (3.2) BS04 OHX ? GO:0000448 ... P49166 25209664
    275504 4u51:o7 (3.2) BS05 ZN ? GO:0000448 ... P49166 25209664
    275505 4u51:o8 (3.2) BS01 rna ? GO:0002181 ... P49167 25209664
    275506 4u51:o9 (3.2) BS01 rna ? GO:0002181 ... P04650 25209664
    275507 4u51:o9 (3.2) BS02 rna ? GO:0002181 ... P04650 25209664
    275508 4u51:p0 (3.2) BS01 rna ? GO:0000027 ... P05317 25209664
    275509 4u51:q0 (3.2) BS01 rna ? GO:0003735 ... P0CH08 25209664
    275510 4u51:q0 (3.2) BS02 ZN ? GO:0003735 ... P0CH08 25209664
    275511 4u51:q2 (3.2) BS01 rna ? GO:0002181 ... P0CX27 25209664
    275512 4u51:q2 (3.2) BS02 ZN ? GO:0002181 ... P0CX27 25209664
    275513 4u51:q2 (3.2) BS03 OHX ? GO:0002181 ... P0CX27 25209664
    275514 4u51:q3 (3.2) BS01 rna ? GO:0002181 ... P0CX25 25209664
    275515 4u51:q3 (3.2) BS02 rna ? GO:0002181 ... P0CX25 25209664
    275516 4u51:q3 (3.2) BS03 ZN ? GO:0002181 ... P0CX25 25209664
    275517 4u51:s0 (3.2) BS01 rna ? GO:0000028 ... P32905 25209664
    275518 4u51:s1 (3.2) BS01 rna ? GO:0000462 ... P33442 25209664
    275519 4u51:s1 (3.2) BS02 OHX ? GO:0000462 ... P33442 25209664
    275520 4u51:s2 (3.2) BS01 rna ? GO:0000054 ... P25443 25209664
    275521 4u51:s3 (3.2) BS01 rna ? GO:0000054 ... P05750 25209664
    275522 4u51:s4 (3.2) BS01 rna ? GO:0002181 ... P0CX35 25209664
    275523 4u51:s4 (3.2) BS02 MG ? GO:0002181 ... P0CX35 25209664
    275524 4u51:s5 (3.2) BS01 rna ? GO:0000054 ... P26783 25209664
    275525 4u51:s6 (3.2) BS01 rna ? GO:0000462 ... P0CX37 25209664
    275526 4u51:s7 (3.2) BS01 rna ? GO:0002181 ... P26786 25209664
    275527 4u51:s8 (3.2) BS01 rna ? GO:0000462 ... P0CX39 25209664
    275528 4u51:s8 (3.2) BS02 rna ? GO:0000462 ... P0CX39 25209664
    275529 4u51:s9 (3.2) BS01 rna ? GO:0000462 ... O13516 25209664
    275530 4u51:sM (3.2) BS01 rna ? GO:0000723 ... P39015 25209664
    275531 4u51:sM (3.2) BS02 rna ? GO:0000723 ... P39015 25209664
    275532 4u51:sM (3.2) BS03 MG ? GO:0000723 ... P39015 25209664
    275533 4u51:sR (3.2) BS01 rna ? GO:0001965 ... P38011 25209664
    275534 4u51:sR (3.2) BS02 OHX ? GO:0001965 ... P38011 25209664
    275535 4u52:C0 (3.0) BS01 rna ? GO:0000054 ... Q08745 25209664
    275536 4u52:C1 (3.0) BS01 rna ? GO:0000028 ... P0CX47 25209664
    275537 4u52:C2 (3.0) BS01 rna ? GO:0000028 ... P48589 25209664
    275538 4u52:C3 (3.0) BS01 rna ? GO:0000462 ... P05756 25209664
    275539 4u52:C3 (3.0) BS02 rna ? GO:0000462 ... P05756 25209664
    275540 4u52:C3 (3.0) BS03 OHX ? GO:0000462 ... P05756 25209664
    275541 4u52:C4 (3.0) BS01 rna ? GO:0000028 ... P06367 25209664
    275542 4u52:C5 (3.0) BS01 rna ? GO:0000054 ... Q01855 25209664
    275543 4u52:C5 (3.0) BS02 rna ? GO:0000054 ... Q01855 25209664
    275544 4u52:C5 (3.0) BS03 OHX ? GO:0000054 ... Q01855 25209664
    275545 4u52:C6 (3.0) BS01 rna ? GO:0000462 ... P0CX51 25209664
    275546 4u52:C7 (3.0) BS01 rna ? GO:0000028 ... P02407 25209664
    275547 4u52:C8 (3.0) BS01 rna ? GO:0000054 ... P0CX55 25209664
    275548 4u52:C8 (3.0) BS02 MG ? GO:0000054 ... P0CX55 25209664
    275549 4u52:C8 (3.0) BS03 OHX ? GO:0000054 ... P0CX55 25209664
    275550 4u52:C9 (3.0) BS01 rna ? GO:0000054 ... P07280 25209664
    275551 4u52:D0 (3.0) BS01 rna ? GO:0000462 ... P38701 25209664
    275552 4u52:D2 (3.0) BS01 rna ? GO:0002181 ... P0C0W1 25209664
    275553 4u52:D3 (3.0) BS01 rna ? GO:0000462 ... P0CX29 25209664
    275554 4u52:D4 (3.0) BS01 rna ? GO:0000462 ... P0CX31 25209664
    275555 4u52:D5 (3.0) BS01 rna ? GO:0002181 ... Q3E792 25209664
    275556 4u52:D6 (3.0) BS01 rna ? GO:0003735 ... P39939 25209664
    275557 4u52:D6 (3.0) BS02 ZN ? GO:0003735 ... P39939 25209664
    275558 4u52:D7 (3.0) BS01 rna ? GO:0000028 ... P35997 25209664
    275559 4u52:D8 (3.0) BS01 rna ? GO:0000028 ... Q3E7X9 25209664
    275560 4u52:D9 (3.0) BS01 rna ? GO:0002181 ... P41057 25209664
    275561 4u52:D9 (3.0) BS02 ZN ? GO:0002181 ... P41057 25209664
    275562 4u52:D9 (3.0) BS03 OHX ? GO:0002181 ... P41057 25209664
    275563 4u52:E0 (3.0) BS01 rna ? GO:0002181 ... P0CX33 25209664
    275564 4u52:E1 (3.0) BS01 rna ? GO:0003735 ... P05759 25209664
    275565 4u52:E1 (3.0) BS02 ZN ? GO:0003735 ... P05759 25209664
    275566 4u52:L2 (3.0) BS01 rna ? GO:0002181 ... P0CX45 25209664
    275567 4u52:L2 (3.0) BS02 rna ? GO:0002181 ... P0CX45 25209664
    275568 4u52:L2 (3.0) BS03 MG ? GO:0002181 ... P0CX45 25209664
    275569 4u52:L3 (3.0) BS01 rna ? GO:0000027 ... P14126 25209664
    275570 4u52:L3 (3.0) BS02 MG ? GO:0000027 ... P14126 25209664
    275571 4u52:L3 (3.0) BS03 OHX ? GO:0000027 ... P14126 25209664
    275572 4u52:L3 (3.0) BS04 OHX ? GO:0000027 ... P14126 25209664
    275573 4u52:L4 (3.0) BS01 rna ? GO:0002181 ... P10664 25209664
    275574 4u52:L4 (3.0) BS02 rna ? GO:0002181 ... P10664 25209664
    275575 4u52:L4 (3.0) BS03 OHX ? GO:0002181 ... P10664 25209664
    275576 4u52:L5 (3.0) BS01 rna ? GO:0000027 ... P26321 25209664
    275577 4u52:L5 (3.0) BS02 rna ? GO:0000027 ... P26321 25209664
    275578 4u52:L5 (3.0) BS03 MG ? GO:0000027 ... P26321 25209664
    275579 4u52:L6 (3.0) BS01 rna ? GO:0000027 ... Q02326 25209664
    275580 4u52:L7 (3.0) BS01 rna ? GO:0000463 ... P05737 25209664
    275581 4u52:L7 (3.0) BS02 rna ? GO:0000463 ... P05737 25209664
    275582 4u52:L8 (3.0) BS01 rna ? GO:0000470 ... P17076 25209664
    275583 4u52:L8 (3.0) BS02 rna ? GO:0000470 ... P17076 25209664
    275584 4u52:L9 (3.0) BS01 rna ? GO:0002181 ... P05738 25209664
    275585 4u52:M0 (3.0) BS01 rna ? GO:0000027 ... P41805 25209664
    275586 4u52:M0 (3.0) BS02 rna ? GO:0000027 ... P41805 25209664
    275587 4u52:M0 (3.0) BS03 MG ? GO:0000027 ... P41805 25209664
    275588 4u52:M1 (3.0) BS01 rna ? GO:0000027 ... Q3E757 25209664
    275589 4u52:M1 (3.0) BS02 rna ? GO:0000027 ... Q3E757 25209664
    275590 4u52:M3 (3.0) BS01 rna ? GO:0002181 ... Q12690 25209664
    275591 4u52:M3 (3.0) BS02 rna ? GO:0002181 ... Q12690 25209664
    275592 4u52:M4 (3.0) BS01 rna ? GO:0000027 ... P36105 25209664
    275593 4u52:M5 (3.0) BS01 rna ? GO:0000470 ... P05748 25209664
    275594 4u52:M5 (3.0) BS02 rna ? GO:0000470 ... P05748 25209664
    275595 4u52:M5 (3.0) BS03 MG ? GO:0000470 ... P05748 25209664
    275596 4u52:M5 (3.0) BS04 OHX ? GO:0000470 ... P05748 25209664
    275597 4u52:M6 (3.0) BS01 rna ? GO:0000470 ... P26784 25209664
    275598 4u52:M7 (3.0) BS01 rna ? GO:0000448 ... P05740 25209664
    275599 4u52:M7 (3.0) BS02 rna ? GO:0000448 ... P05740 25209664
    275600 4u52:M7 (3.0) BS03 MG ? GO:0000448 ... P05740 25209664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).