SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    27401 1kbq:B (1.8) BS02 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    27402 1kbq:B (1.8) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    27403 1kbq:B (1.8) BS04 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    27404 1kbq:C (1.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    27405 1kbq:C (1.8) BS02 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    27406 1kbq:C (1.8) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    27407 1kbq:C (1.8) BS04 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    27408 1kbq:D (1.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    27409 1kbq:D (1.8) BS02 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    27410 1kbq:D (1.8) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    27411 1kbq:D (1.8) BS04 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    27412 1kbu:A (2.2) BS01 dna ? GO:0003677 ... P06956 12051940
    27413 1kbu:B (2.2) BS01 dna ? GO:0003677 ... P06956 12051940
    27414 1kbu:B (2.2) BS02 dna ? GO:0003677 ... P06956 12051940
    27415 1kbv:A (1.95) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27416 1kbv:A (1.95) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27417 1kbv:A (1.95) BS03 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27418 1kbv:A (1.95) BS04 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27419 1kbv:B (1.95) BS01 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27420 1kbv:B (1.95) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27421 1kbv:B (1.95) BS03 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27422 1kbv:B (1.95) BS04 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27423 1kbv:C (1.95) BS01 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27424 1kbv:C (1.95) BS02 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27425 1kbv:C (1.95) BS03 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27426 1kbv:C (1.95) BS04 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27427 1kbv:D (1.95) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27428 1kbv:D (1.95) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27429 1kbv:D (1.95) BS03 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27430 1kbv:D (1.95) BS04 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27431 1kbv:E (1.95) BS01 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27432 1kbv:E (1.95) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27433 1kbv:E (1.95) BS03 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27434 1kbv:E (1.95) BS04 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27435 1kbv:F (1.95) BS01 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27436 1kbv:F (1.95) BS02 NO2 1.7.2.1 GO:0005507 ... Q02219 11827480
    27437 1kbv:F (1.95) BS03 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27438 1kbv:F (1.95) BS04 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27439 1kbw:A (2.4) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27440 1kbw:A (2.4) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27441 1kbw:B (2.4) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27442 1kbw:B (2.4) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27443 1kbw:C (2.4) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27444 1kbw:C (2.4) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27445 1kbw:D (2.4) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27446 1kbw:D (2.4) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27447 1kbw:E (2.4) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27448 1kbw:E (2.4) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27449 1kbw:F (2.4) BS01 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27450 1kbw:F (2.4) BS02 CU 1.7.2.1 GO:0005507 ... Q02219 11827480
    27451 1kby:L (2.5) BS01 BCL ? GO:0009772 ... P0C0Y8 16228547
    27452 1kby:L (2.5) BS02 BCL ? GO:0009772 ... P0C0Y8 16228547
    27453 1kby:L (2.5) BS03 BCL ? GO:0009772 ... P0C0Y8 16228547
    27454 1kby:L (2.5) BS04 BPH ? GO:0009772 ... P0C0Y8 16228547
    27455 1kby:L (2.5) BS05 BPH ? GO:0009772 ... P0C0Y8 16228547
    27456 1kby:L (2.5) BS06 FE ? GO:0009772 ... P0C0Y8 16228547
    27457 1kby:L (2.5) BS07 U10 ? GO:0009772 ... P0C0Y8 16228547
    27458 1kby:M (2.5) BS01 BCL ? GO:0009772 ... P0C0Y9 16228547
    27459 1kby:M (2.5) BS02 BCL ? GO:0009772 ... P0C0Y9 16228547
    27460 1kby:M (2.5) BS03 BPH ? GO:0009772 ... P0C0Y9 16228547
    27461 1kby:M (2.5) BS04 BPH ? GO:0009772 ... P0C0Y9 16228547
    27462 1kby:M (2.5) BS05 FE ? GO:0009772 ... P0C0Y9 16228547
    27463 1kby:M (2.5) BS06 BPH ? GO:0009772 ... P0C0Y9 16228547
    27464 1kby:M (2.5) BS07 U10 ? GO:0009772 ... P0C0Y9 16228547
    27465 1kby:M (2.5) BS08 SPO ? GO:0009772 ... P0C0Y9 16228547
    27466 1kc1:A (2.6) BS01 NDP 1.1.1.133 GO:0000271 ... P26392 12057193
    27467 1kc2:A (2.1) BS01 peptide 2.7.10.2 N/A P00524 11851339
    27468 1kc3:A (2.7) BS01 NDP 1.1.1.133 GO:0000271 ... P26392 12057193
    27469 1kc3:A (2.7) BS02 TRH 1.1.1.133 GO:0000271 ... P26392 12057193
    27470 1kc4:A (-1.00) BS01 peptide ? GO:0005515 ... P60615 11790782
    27471 1kc5:H (2.5) BS01 peptide ? N/A P01869 11859128
    27472 1kc5:L (2.5) BS01 peptide ? GO:0002250 ... P01837 11859128
    27473 1kc6:A (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27474 1kc6:A (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27475 1kc6:B (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27476 1kc6:B (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27477 1kc6:C (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27478 1kc6:C (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27479 1kc6:D (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27480 1kc6:D (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 11742344
    27481 1kc7:A (2.2) BS01 MG 2.7.9.1 GO:0005524 ... P22983 11790099
    27482 1kc7:A (2.2) BS02 PPR 2.7.9.1 GO:0005524 ... P22983 11790099 MOAD: Ki=3uM
    27483 1kc8:1 (3.01) BS01 rna ? GO:0003735 ... P60619 12860128
    27484 1kc8:2 (3.01) BS01 rna ? GO:0003723 ... P32410 12860128
    27485 1kc8:3 (3.01) BS01 rna ? GO:0003735 ... P22452 12860128
    27486 1kc8:4 (3.01) BS01 rna ? GO:0003735 ... P32411 12860128
    27487 1kc8:4 (3.01) BS02 MG ? GO:0003735 ... P32411 12860128
    27488 1kc8:C (3.01) BS01 rna ? GO:0002181 ... P20276 12860128
    27489 1kc8:C (3.01) BS02 MG ? GO:0002181 ... P20276 12860128
    27490 1kc8:D (3.01) BS01 rna ? GO:0003723 ... P20279 12860128
    27491 1kc8:E (3.01) BS01 rna ? GO:0003735 ... P12735 12860128
    27492 1kc8:F (3.01) BS01 rna ? GO:0000049 ... P14124 12860128
    27493 1kc8:F (3.01) BS02 rna ? GO:0000049 ... P14124 12860128
    27494 1kc8:G (3.01) BS01 rna ? GO:0002181 ... P14135 12860128
    27495 1kc8:H (3.01) BS01 rna ? GO:0001682 ... P12743 12860128
    27496 1kc8:J (3.01) BS01 rna ? GO:0003735 ... P60617 12860128
    27497 1kc8:K (3.01) BS01 rna ? GO:0003729 ... P29198 12860128
    27498 1kc8:L (3.01) BS01 rna ? GO:0003735 ... P22450 12860128
    27499 1kc8:M (3.01) BS01 rna ? GO:0003735 ... P12737 12860128
    27500 1kc8:N (3.01) BS01 rna ? GO:0002181 ... P60618 12860128
    27501 1kc8:O (3.01) BS01 rna ? GO:0000027 ... P14123 12860128
    27502 1kc8:O (3.01) BS02 rna ? GO:0000027 ... P14123 12860128
    27503 1kc8:P (3.01) BS01 rna ? GO:0003723 ... P12733 12860128
    27504 1kc8:Q (3.01) BS01 rna ? GO:0003723 ... P14119 12860128
    27505 1kc8:R (3.01) BS01 rna ? GO:0003735 ... P12734 12860128
    27506 1kc8:R (3.01) BS02 rna ? GO:0003735 ... P12734 12860128
    27507 1kc8:S (3.01) BS01 rna ? GO:0002181 ... P10970 12860128
    27508 1kc8:T (3.01) BS01 rna ? GO:0003735 ... P12732 12860128
    27509 1kc8:U (3.01) BS01 rna ? GO:0003723 ... P10972 12860128
    27510 1kc8:U (3.01) BS02 MG ? GO:0003723 ... P10972 12860128
    27511 1kc8:V (3.01) BS01 rna ? GO:0003735 ... P14116 12860128
    27512 1kc8:W (3.01) BS01 rna ? GO:0003735 ... P10971 12860128
    27513 1kc8:X (3.01) BS01 rna ? GO:0000463 ... P14121 12860128
    27514 1kc8:X (3.01) BS02 rna ? GO:0000463 ... P14121 12860128
    27515 1kc8:Y (3.01) BS01 rna ? GO:0002181 ... P18138 12860128
    27516 1kc8:Z (3.01) BS01 rna ? GO:0000166 ... P12736 12860128
    27517 1kc8:Z (3.01) BS02 MG ? GO:0000166 ... P12736 12860128
    27518 1kcb:A (1.65) BS01 CU 1.7.2.1 GO:0005507 ... P25006 12615072
    27519 1kcb:A (1.65) BS02 CU 1.7.2.1 GO:0005507 ... P25006 12615072
    27520 1kcc:A (1.0) BS01 GTR 3.2.1.15 GO:0004650 ... P79074 12022868
    27521 1kcd:A (1.15) BS01 GTK 3.2.1.15 GO:0004650 ... P79074 12022868
    27522 1kcd:A (1.15) BS02 GTR 3.2.1.15 GO:0004650 ... P79074 12022868
    27523 1kce:A (2.0) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 8973201
    27524 1kce:A (2.0) BS02 UMP 2.1.1.45 GO:0000287 ... P0A884 8973201
    27525 1kce:B (2.0) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 8973201
    27526 1kce:B (2.0) BS02 UMP 2.1.1.45 GO:0000287 ... P0A884 8973201
    27527 1kcg:C (2.6) BS01 GSH ? N/A Q9BZM4 11754823
    27528 1kck:A (2.43) BS01 G6D 2.4.1.19 GO:0003824 ... P43379 11696539
    27529 1kck:A (2.43) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27530 1kck:A (2.43) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27531 1kck:A (2.43) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27532 1kck:A (2.43) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27533 1kck:A (2.43) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27534 1kck:A (2.43) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27535 1kck:A (2.43) BS08 ADH 2.4.1.19 GO:0003824 ... P43379 11696539
    27536 1kck:A (2.43) BS09 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27537 1kck:A (2.43) BS10 CA 2.4.1.19 GO:0003824 ... P43379 11696539
    27538 1kck:A (2.43) BS11 CA 2.4.1.19 GO:0003824 ... P43379 11696539
    27539 1kcl:A (1.94) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27540 1kcl:A (1.94) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27541 1kcl:A (1.94) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27542 1kcl:A (1.94) BS04 BGC 2.4.1.19 GO:0003824 ... P43379 11696539
    27543 1kcl:A (1.94) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27544 1kcl:A (1.94) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27545 1kcl:A (1.94) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27546 1kcl:A (1.94) BS08 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27547 1kcl:A (1.94) BS09 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27548 1kcl:A (1.94) BS10 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27549 1kcl:A (1.94) BS11 CA 2.4.1.19 GO:0003824 ... P43379 11696539
    27550 1kcl:A (1.94) BS12 CA 2.4.1.19 GO:0003824 ... P43379 11696539
    27551 1kcl:A (1.94) BS13 GLC 2.4.1.19 GO:0003824 ... P43379 11696539
    27552 1kcr:H (2.9) BS01 peptide ? N/A P01869 11120821
    27553 1kcr:L (2.9) BS01 peptide ? GO:0002250 ... P01837 11120821
    27554 1kcs:H (2.5) BS01 peptide ? GO:0003823 ... P18532 11859128
    27555 1kcs:L (2.5) BS01 peptide ? GO:0002250 ... P01837 11859128
    27556 1kcw:A (3.0) BS01 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27557 1kcw:A (3.0) BS02 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27558 1kcw:A (3.0) BS03 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27559 1kcw:A (3.0) BS04 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27560 1kcw:A (3.0) BS05 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27561 1kcw:A (3.0) BS06 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27562 1kcw:A (3.0) BS07 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27563 1kcw:A (3.0) BS08 CU 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27564 1kcw:A (3.0) BS09 O 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27565 1kcw:A (3.0) BS10 O 1.11.1.27
    1.11.1.9
    1.16.3.1
    1.16.3.4
    GO:0004322 ... P00450 N/A
    27566 1kcz:A (1.9) BS01 MG 4.3.1.2 GO:0003824 ... Q05514 11748244
    27567 1kcz:B (1.9) BS01 MG 4.3.1.2 GO:0003824 ... Q05514 11748244
    27568 1kd1:1 (3.0) BS01 rna ? GO:0003735 ... P60619 12150912
    27569 1kd1:2 (3.0) BS01 rna ? GO:0003723 ... P32410 12150912
    27570 1kd1:3 (3.0) BS01 rna ? GO:0003735 ... P22452 12150912
    27571 1kd1:4 (3.0) BS01 rna ? GO:0003735 ... P32411 12150912
    27572 1kd1:4 (3.0) BS02 MG ? GO:0003735 ... P32411 12150912
    27573 1kd1:C (3.0) BS01 rna ? GO:0002181 ... P20276 12150912
    27574 1kd1:C (3.0) BS02 MG ? GO:0002181 ... P20276 12150912
    27575 1kd1:D (3.0) BS01 rna ? GO:0003723 ... P20279 12150912
    27576 1kd1:E (3.0) BS01 rna ? GO:0003735 ... P12735 12150912
    27577 1kd1:F (3.0) BS01 rna ? GO:0000049 ... P14124 12150912
    27578 1kd1:F (3.0) BS02 rna ? GO:0000049 ... P14124 12150912
    27579 1kd1:G (3.0) BS01 rna ? GO:0002181 ... P14135 12150912
    27580 1kd1:H (3.0) BS01 rna ? GO:0001682 ... P12743 12150912
    27581 1kd1:J (3.0) BS01 rna ? GO:0003735 ... P60617 12150912
    27582 1kd1:K (3.0) BS01 rna ? GO:0003729 ... P29198 12150912
    27583 1kd1:L (3.0) BS01 rna ? GO:0003735 ... P22450 12150912
    27584 1kd1:M (3.0) BS01 rna ? GO:0003735 ... P12737 12150912
    27585 1kd1:N (3.0) BS01 rna ? GO:0002181 ... P60618 12150912
    27586 1kd1:O (3.0) BS01 rna ? GO:0000027 ... P14123 12150912
    27587 1kd1:O (3.0) BS02 rna ? GO:0000027 ... P14123 12150912
    27588 1kd1:P (3.0) BS01 rna ? GO:0003723 ... P12733 12150912
    27589 1kd1:Q (3.0) BS01 rna ? GO:0003723 ... P14119 12150912
    27590 1kd1:R (3.0) BS01 rna ? GO:0003735 ... P12734 12150912
    27591 1kd1:R (3.0) BS02 rna ? GO:0003735 ... P12734 12150912
    27592 1kd1:S (3.0) BS01 rna ? GO:0002181 ... P10970 12150912
    27593 1kd1:T (3.0) BS01 rna ? GO:0003735 ... P12732 12150912
    27594 1kd1:U (3.0) BS01 rna ? GO:0003723 ... P10972 12150912
    27595 1kd1:U (3.0) BS02 MG ? GO:0003723 ... P10972 12150912
    27596 1kd1:V (3.0) BS01 rna ? GO:0003735 ... P14116 12150912
    27597 1kd1:W (3.0) BS01 rna ? GO:0003735 ... P10971 12150912
    27598 1kd1:X (3.0) BS01 rna ? GO:0000463 ... P14121 12150912
    27599 1kd1:X (3.0) BS02 rna ? GO:0000463 ... P14121 12150912
    27600 1kd1:Y (3.0) BS01 rna ? GO:0002181 ... P18138 12150912

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).