SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    279201 4v0c:C (2.86) BS01 CA ? GO:0000086 ... P0DP23 25441029
    279202 4v0c:C (2.86) BS02 CA ? GO:0000086 ... P0DP23 25441029
    279203 4v0c:D (2.86) BS01 CA ? GO:0000086 ... P0DP23 25441029
    279204 4v0c:D (2.86) BS02 CA ? GO:0000086 ... P0DP23 25441029
    279205 4v0g:A (3.0) BS01 G9B 2.7.10.2 GO:0004672 ... P52333 N/A
    279206 4v0g:B (3.0) BS01 G9B 2.7.10.2 GO:0004672 ... P52333 N/A
    279207 4v0h:A (1.79) BS01 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279208 4v0h:A (1.79) BS02 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279209 4v0h:B (1.79) BS01 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279210 4v0h:B (1.79) BS02 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279211 4v0h:C (1.79) BS01 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279212 4v0h:C (1.79) BS02 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279213 4v0h:D (1.79) BS01 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279214 4v0h:D (1.79) BS02 FE 3.1.27.- GO:0004521 ... A4D2B0 30507380
    279215 4v0i:A (2.54) BS01 J82 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 27144736
    279216 4v0i:B (2.54) BS01 J82 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 27144736
    279217 4v0j:A (2.8) BS01 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279218 4v0j:A (2.8) BS02 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279219 4v0j:B (2.8) BS01 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279220 4v0j:B (2.8) BS02 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279221 4v0j:C (2.8) BS01 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279222 4v0j:C (2.8) BS02 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279223 4v0j:D (2.8) BS01 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279224 4v0j:D (2.8) BS02 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279225 4v0j:E (2.8) BS01 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279226 4v0j:E (2.8) BS02 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279227 4v0j:F (2.8) BS01 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279228 4v0j:F (2.8) BS02 FE2 1.14.19.2 GO:0006631 ... P22337 26224800
    279229 4v0k:A (1.438) BS01 GDP ? GO:0003924 ... A8JF99 25402481
    279230 4v0k:B (1.438) BS01 GDP ? GO:0003924 ... A8JF99 25402481
    279231 4v0l:A (2.197) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279232 4v0l:A (2.197) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279233 4v0l:B (2.197) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279234 4v0l:B (2.197) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279235 4v0m:A (3.45) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279236 4v0m:A (3.45) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279237 4v0m:C (3.45) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279238 4v0m:C (3.45) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279239 4v0m:E (3.45) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279240 4v0m:E (3.45) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279241 4v0m:G (3.45) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279242 4v0m:G (3.45) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279243 4v0n:A (3.131) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279244 4v0n:A (3.131) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279245 4v0n:C (3.131) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279246 4v0n:C (3.131) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279247 4v0n:E (3.131) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279248 4v0n:E (3.131) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279249 4v0n:G (3.131) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279250 4v0n:G (3.131) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279251 4v0o:A (3.351) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279252 4v0o:A (3.351) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279253 4v0o:C (3.351) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279254 4v0o:C (3.351) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279255 4v0o:E (3.351) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279256 4v0o:E (3.351) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279257 4v0o:G (3.351) BS01 GTP ? GO:0003924 ... A8JF99 25402481
    279258 4v0o:G (3.351) BS02 MG ? GO:0003924 ... A8JF99 25402481
    279259 4v0q:A (2.3) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279260 4v0q:A (2.3) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279261 4v0q:A (2.3) BS03 SAH 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279262 4v0r:A (2.4) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279263 4v0r:A (2.4) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279264 4v0r:A (2.4) BS03 SAH 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279265 4v0r:A (2.4) BS04 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279266 4v0r:A (2.4) BS05 MG 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5UB51 25775415
    279267 4v0s:A (1.55) BS01 2HN 4.2.1.10 GO:0003855 ... P9WPX7 N/A
    279268 4v0s:A (1.55) BS02 2HN 4.2.1.10 GO:0003855 ... P9WPX7 N/A
    279269 4v0s:A (1.55) BS03 7HN 4.2.1.10 GO:0003855 ... P9WPX7 N/A
    279270 4v0s:B (1.55) BS01 2HN 4.2.1.10 GO:0003855 ... P9WPX7 N/A
    279271 4v0u:A (7.88) BS01 LAB 3.6.4.- GO:0000287 ... P68135 25774600 BindingDB: IC50=8470nM
    279272 4v0u:A (7.88) BS02 ATP 3.6.4.- GO:0000287 ... P68135 25774600
    279273 4v0u:B (7.88) BS01 LAB 3.6.4.- GO:0000287 ... P68135 25774600 BindingDB: IC50=8470nM
    279274 4v0u:B (7.88) BS02 ATP 3.6.4.- GO:0000287 ... P68135 25774600
    279275 4v0u:C (7.88) BS01 LAB 3.6.4.- GO:0000287 ... P68135 25774600 BindingDB: IC50=8470nM
    279276 4v0u:C (7.88) BS02 ATP 3.6.4.- GO:0000287 ... P68135 25774600
    279277 4v0u:D (7.88) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279278 4v0u:D (7.88) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279279 4v0u:D (7.88) BS03 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279280 4v0u:F (7.88) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279281 4v0u:F (7.88) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279282 4v0u:F (7.88) BS03 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279283 4v0u:H (7.88) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279284 4v0u:H (7.88) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279285 4v0u:H (7.88) BS03 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279286 4v0u:J (7.88) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279287 4v0u:J (7.88) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279288 4v0u:J (7.88) BS03 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279289 4v0u:L (7.88) BS01 LAB 3.6.4.- GO:0000287 ... P68135 25774600 BindingDB: IC50=8470nM
    279290 4v0u:L (7.88) BS02 ATP 3.6.4.- GO:0000287 ... P68135 25774600
    279291 4v0u:M (7.88) BS01 LAB 3.6.4.- GO:0000287 ... P68135 25774600 BindingDB: IC50=8470nM
    279292 4v0u:M (7.88) BS02 ATP 3.6.4.- GO:0000287 ... P68135 25774600
    279293 4v0u:N (7.88) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279294 4v0u:N (7.88) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279295 4v0u:N (7.88) BS03 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279296 4v0v:A (1.61) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279297 4v0v:A (1.61) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279298 4v0v:C (1.61) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279299 4v0v:C (1.61) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279300 4v0w:A (1.55) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279301 4v0w:A (1.55) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279302 4v0w:A (1.55) BS03 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279303 4v0w:C (1.55) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279304 4v0w:C (1.55) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279305 4v0w:C (1.55) BS03 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279306 4v0x:A (1.85) BS01 peptide 3.1.3.16 GO:0000775 ... P63087 25774600
    279307 4v0x:A (1.85) BS02 MN 3.1.3.16 GO:0000775 ... P63087 25774600
    279308 4v0z:A (1.7) BS01 BGC 3.2.1.91 GO:0004553 ... P62694 35997626
    279309 4v0z:A (1.7) BS02 BGC 3.2.1.91 GO:0004553 ... P62694 35997626
    279310 4v0z:A (1.7) BS03 CO 3.2.1.91 GO:0004553 ... P62694 35997626
    279311 4v0z:A (1.7) BS04 CO 3.2.1.91 GO:0004553 ... P62694 35997626
    279312 4v0z:A (1.7) BS05 OPO 3.2.1.91 GO:0004553 ... P62694 35997626
    279313 4v11:A (1.95) BS01 peptide ? GO:0016020 ... P21579 25673844
    279314 4v11:A (1.95) BS02 CA ? GO:0016020 ... P21579 25673844
    279315 4v11:A (1.95) BS03 CA ? GO:0016020 ... P21579 25673844
    279316 4v11:A (1.95) BS04 CA ? GO:0016020 ... P21579 25673844
    279317 4v12:A (1.5) BS01 POG ? N/A A0R724 25754266
    279318 4v15:A (1.5) BS01 PLP 4.1.2.42 GO:0008721 ... A0A0J9X243 25884707
    279319 4v15:A (1.5) BS02 PLP 4.1.2.42 GO:0008721 ... A0A0J9X243 25884707
    279320 4v15:A (1.5) BS03 MN 4.1.2.42 GO:0008721 ... A0A0J9X243 25884707
    279321 4v15:B (1.5) BS01 PLP 4.1.2.42 GO:0008721 ... A0A0J9X243 25884707
    279322 4v15:B (1.5) BS02 PLP 4.1.2.42 GO:0008721 ... A0A0J9X243 25884707
    279323 4v15:B (1.5) BS03 MN 4.1.2.42 GO:0008721 ... A0A0J9X243 25884707
    279324 4v19:0 (3.4) BS01 rna ? GO:0003735 ... A0A4X1U0F6 25271403
    279325 4v19:1 (3.4) BS01 rna ? GO:0003735 ... A0A0R4J8D5 25271403
    279326 4v19:2 (3.4) BS01 rna ? GO:0003735 ... F1SGC7 25271403
    279327 4v19:3 (3.4) BS01 rna ? GO:0003735 ... A0A8D1MIP3 25271403
    279328 4v19:4 (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279329 4v19:5 (3.4) BS01 rna ? GO:0003735 ... I3LTC4 25271403
    279330 4v19:5 (3.4) BS02 ZN ? GO:0003735 ... I3LTC4 25271403
    279331 4v19:6 (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279332 4v19:7 (3.4) BS01 rna ? GO:0003735 ... W5IDC1 25271403
    279333 4v19:8 (3.4) BS01 rna ? GO:0003735 ... F1SVC5 25271403
    279334 4v19:9 (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279335 4v19:9 (3.4) BS02 ZN N/A GO:0003735 ... N/A 25271403
    279336 4v19:D (3.4) BS01 rna ? GO:0003735 ... F1RRN2 25271403
    279337 4v19:E (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279338 4v19:F (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279339 4v19:I (3.4) BS01 rna ? GO:0003735 ... I3LR45 25271403
    279340 4v19:J (3.4) BS01 rna ? GO:0005840 ... F1RWJ0 25271403
    279341 4v19:K (3.4) BS01 rna ? GO:0003735 ... F1RU54 25271403
    279342 4v19:N (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279343 4v19:O (3.4) BS01 rna ? GO:0003735 ... F1RQV7 25271403
    279344 4v19:P (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279345 4v19:Q (3.4) BS01 rna ? GO:0003735 ... F1RI89 25271403
    279346 4v19:R (3.4) BS01 rna ? GO:0003735 ... F1RMQ4 25271403
    279347 4v19:S (3.4) BS01 rna ? GO:0003735 ... A0A0R4J8D5 25271403
    279348 4v19:S (3.4) BS02 rna ? GO:0003735 ... A0A0R4J8D5 25271403
    279349 4v19:T (3.4) BS01 rna ? GO:0003735 ... I3LNJ0 25271403
    279350 4v19:U (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279351 4v19:V (3.4) BS01 rna ? GO:0003723 ... F1RY70 25271403
    279352 4v19:W (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279353 4v19:X (3.4) BS01 rna N/A GO:0003735 ... N/A 25271403
    279354 4v19:X (3.4) BS02 MG N/A GO:0003735 ... N/A 25271403
    279355 4v19:Y (3.4) BS01 rna ? GO:0003723 ... F1RHJ1 25271403
    279356 4v1a:x (3.4) BS01 ZN ? GO:0003735 ... F1RRH6 25271403
    279357 4v1f:A (1.697) BS01 BQ1 N/A GO:0015078 ... N/A 26601184
    279358 4v1f:A (1.697) BS02 BQ1 N/A GO:0015078 ... N/A 26601184
    279359 4v1f:B (1.697) BS01 BQ1 N/A GO:0015078 ... N/A 26601184
    279360 4v1f:C (1.697) BS01 BQ1 N/A GO:0015078 ... N/A 26601184
    279361 4v1h:A (1.8) BS01 IBQ N/A GO:0015078 ... N/A N/A
    279362 4v1h:A (1.8) BS02 IBQ N/A GO:0015078 ... N/A N/A
    279363 4v1h:B (1.8) BS01 IBQ N/A GO:0015078 ... N/A N/A
    279364 4v1h:C (1.8) BS01 IBQ N/A GO:0015078 ... N/A N/A
    279365 4v1m:A (6.6) BS01 rna 2.7.7.6 GO:0000428 ... P04050 25652824
    279366 4v1m:A (6.6) BS02 dna 2.7.7.6 GO:0000428 ... P04050 25652824
    279367 4v1m:A (6.6) BS03 ZN 2.7.7.6 GO:0000428 ... P04050 25652824
    279368 4v1m:A (6.6) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 25652824
    279369 4v1m:A (6.6) BS05 MG 2.7.7.6 GO:0000428 ... P04050 25652824
    279370 4v1m:B (6.6) BS01 rna 2.7.7.6 GO:0000428 ... P08518 25652824
    279371 4v1m:B (6.6) BS02 dna 2.7.7.6 GO:0000428 ... P08518 25652824
    279372 4v1m:B (6.6) BS03 ZN 2.7.7.6 GO:0000428 ... P08518 25652824
    279373 4v1m:C (6.6) BS01 ZN ? GO:0000428 ... P16370 25652824
    279374 4v1m:I (6.6) BS01 ZN ? GO:0000428 ... P27999 25652824
    279375 4v1m:I (6.6) BS02 ZN ? GO:0000428 ... P27999 25652824
    279376 4v1m:J (6.6) BS01 ZN ? GO:0000428 ... P22139 25652824
    279377 4v1m:L (6.6) BS01 ZN 2.7.7.6 GO:0000428 ... P40422 25652824
    279378 4v1n:A (7.8) BS01 rna 2.7.7.6 GO:0000428 ... P04050 25652824
    279379 4v1n:A (7.8) BS02 dna 2.7.7.6 GO:0000428 ... P04050 25652824
    279380 4v1n:A (7.8) BS03 ZN 2.7.7.6 GO:0000428 ... P04050 25652824
    279381 4v1n:A (7.8) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 25652824
    279382 4v1n:A (7.8) BS05 MG 2.7.7.6 GO:0000428 ... P04050 25652824
    279383 4v1n:B (7.8) BS01 rna 2.7.7.6 GO:0000428 ... P08518 25652824
    279384 4v1n:B (7.8) BS02 dna 2.7.7.6 GO:0000428 ... P08518 25652824
    279385 4v1n:B (7.8) BS03 ZN 2.7.7.6 GO:0000428 ... P08518 25652824
    279386 4v1n:C (7.8) BS01 ZN ? GO:0000428 ... P16370 25652824
    279387 4v1n:I (7.8) BS01 ZN ? GO:0000428 ... P27999 25652824
    279388 4v1n:I (7.8) BS02 ZN ? GO:0000428 ... P27999 25652824
    279389 4v1n:J (7.8) BS01 ZN ? GO:0000428 ... P22139 25652824
    279390 4v1n:L (7.8) BS01 ZN ? GO:0000428 ... P40422 25652824
    279391 4v1n:M (7.8) BS01 dna ? GO:0000993 ... P29055 25652824
    279392 4v1n:M (7.8) BS02 dna ? GO:0000993 ... P29055 25652824
    279393 4v1n:M (7.8) BS03 ZN ? GO:0000993 ... P29055 25652824
    279394 4v1n:O (7.8) BS01 dna ? GO:0003677 ... P13393 25652824
    279395 4v1n:O (7.8) BS02 dna ? GO:0003677 ... P13393 25652824
    279396 4v1o:A (9.7) BS01 rna 2.7.7.6 GO:0000428 ... P04050 25652824
    279397 4v1o:A (9.7) BS02 dna 2.7.7.6 GO:0000428 ... P04050 25652824
    279398 4v1o:A (9.7) BS03 ZN 2.7.7.6 GO:0000428 ... P04050 25652824
    279399 4v1o:A (9.7) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 25652824
    279400 4v1o:A (9.7) BS05 MG 2.7.7.6 GO:0000428 ... P04050 25652824

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).