SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2601 1ah7:A (1.501) BS02 ZN 3.1.4.3 GO:0004629 ... P09598 2493587
    2602 1ah7:A (1.501) BS03 ZN 3.1.4.3 GO:0004629 ... P09598 2493587
    2603 1aha:A (2.2) BS01 ADE 3.2.2.22 GO:0017148 ... P16094 8075985
    2604 1ahb:A (2.2) BS01 FMP 3.2.2.22 GO:0017148 ... P16094 8075985
    2605 1ahd:P (-1.00) BS01 dna ? GO:0000981 ... Q24645 7903398
    2606 1ahd:P (-1.00) BS02 dna ? GO:0000981 ... Q24645 7903398
    2607 1ahe:A (2.3) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2608 1ahe:B (2.3) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2609 1ahf:A (2.3) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2610 1ahf:A (2.3) BS02 IOP 2.6.1.1 GO:0003824 ... P00509 7664122
    2611 1ahf:B (2.3) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2612 1ahg:A (2.5) BS01 TYR 2.6.1.1 GO:0003824 ... P00509 7664122
    2613 1ahg:A (2.5) BS02 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2614 1ahg:B (2.5) BS01 TYR 2.6.1.1 GO:0003824 ... P00509 7664122
    2615 1ahg:B (2.5) BS02 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2616 1ahh:A (2.3) BS01 NAD 1.1.1.159 GO:0005829 ... P0AET8 8672472
    2617 1ahh:B (2.3) BS01 NAD 1.1.1.159 GO:0005829 ... P0AET8 8672472
    2618 1ahi:A (2.3) BS01 CHO 1.1.1.159 GO:0005829 ... P0AET8 8672472
    2619 1ahi:A (2.3) BS02 NAI 1.1.1.159 GO:0005829 ... P0AET8 8672472
    2620 1ahi:B (2.3) BS01 CHO 1.1.1.159 GO:0005829 ... P0AET8 8672472
    2621 1ahi:B (2.3) BS02 NAI 1.1.1.159 GO:0005829 ... P0AET8 8672472
    2622 1ahj:A (2.65) BS01 FE 4.2.1.84 GO:0003824 ... P13448 9195885
    2623 1ahj:C (2.65) BS01 FE 4.2.1.84 GO:0003824 ... P13448 9195885
    2624 1ahj:E (2.65) BS01 FE 4.2.1.84 GO:0003824 ... P13448 9195885
    2625 1ahj:G (2.65) BS01 FE 4.2.1.84 GO:0003824 ... P13448 9195885
    2626 1ahn:A (2.6) BS01 FMN ? GO:0005515 ... P61949 9416602
    2627 1ahp:A (3.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 9145112
    2628 1ahp:A (3.0) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 9145112
    2629 1ahp:A (3.0) BS03 PLP 2.4.1.1 GO:0004645 ... P00490 9145112
    2630 1ahp:B (3.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 9145112
    2631 1ahp:B (3.0) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 9145112
    2632 1ahp:B (3.0) BS03 PLP 2.4.1.1 GO:0004645 ... P00490 9145112
    2633 1ahr:A (1.8) BS01 CA ? GO:0005509 ... P62149 9195880
    2634 1ahr:A (1.8) BS02 CA ? GO:0005509 ... P62149 9195880
    2635 1ahr:A (1.8) BS03 CA ? GO:0005509 ... P62149 9195880
    2636 1ahr:A (1.8) BS04 CA ? GO:0005509 ... P62149 9195880
    2637 1aht:H (1.6) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 7574675
    2638 1aht:H (1.6) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 7574675
    2639 1aht:H (1.6) BS03 APA 3.4.21.5 GO:0004252 ... P00734 7574675
    2640 1ahu:A (2.7) BS01 FAA 1.1.3.38 GO:0003824 ... P56216 9261083
    2641 1ahu:B (2.7) BS01 FAA 1.1.3.38 GO:0003824 ... P56216 9261083
    2642 1ahv:A (3.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    2643 1ahv:A (3.1) BS02 NCR 1.1.3.38 GO:0003824 ... P56216 9261083
    2644 1ahv:B (3.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    2645 1ahv:B (3.1) BS02 NCR 1.1.3.38 GO:0003824 ... P56216 9261083
    2646 1ahx:A (2.0) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2647 1ahx:A (2.0) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 7664122 MOAD: Kd=120uM
    2648 1ahx:B (2.0) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2649 1ahx:B (2.0) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 7664122 MOAD: Kd=120uM
    2650 1ahy:A (2.3) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2651 1ahy:B (2.3) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 7664122
    2652 1ahz:A (3.3) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    2653 1ahz:A (3.3) BS02 EPT 1.1.3.38 GO:0003824 ... P56216 9261083
    2654 1ahz:B (3.3) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    2655 1ai0:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2656 1ai0:D (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2657 1ai0:F (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2658 1ai0:F (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2659 1ai0:H (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2660 1ai0:H (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2661 1ai0:J (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2662 1ai0:L (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2663 1ai0:L (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2664 1ai1:H (2.8) BS01 peptide ? N/A P01868 9054968
    2665 1ai1:L (2.8) BS01 peptide ? GO:0002250 ... P01837 9054968
    2666 1ai2:A (1.9) BS01 NAP 1.1.1.42 GO:0000287 ... P08200 9211842 MOAD: Ki=2.7uM
    2667 1ai2:A (1.9) BS02 ICA 1.1.1.42 GO:0000287 ... P08200 9211842
    2668 1ai3:A (1.9) BS01 NDO 1.1.1.42 GO:0000287 ... P08200 9211842 MOAD: Ki=403uM
    2669 1ai4:B (2.35) BS01 CA 3.5.1.11 GO:0016787 ... P06875 9813130
    2670 1ai4:B (2.35) BS02 DHY 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=3.13mM
    2671 1ai5:B (2.36) BS01 CA 3.5.1.11 GO:0016787 ... P06875 9813130
    2672 1ai5:B (2.36) BS02 MNP 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=0.189mM
    2673 1ai6:B (2.55) BS01 CA 3.5.1.11 GO:0016787 ... P06875 9813130
    2674 1ai6:B (2.55) BS02 4HP 3.5.1.11 GO:0016787 ... P06875 9813130
    2675 1ai7:B (2.5) BS01 CA 3.5.1.11 GO:0016787 ... P06875 9813130
    2676 1ai8:H (1.85) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 1304349
    2677 1ai8:H (1.85) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 1304349
    2678 1ai8:H (1.85) BS03 T42 3.4.21.5 GO:0004252 ... P00734 1304349
    2679 1ai9:A (1.85) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 9374515
    2680 1ai9:B (1.85) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 9374515
    2681 1aia:A (2.2) BS01 PMP 2.6.1.1 GO:0004069 ... P00509 7819232
    2682 1aia:B (2.2) BS01 PMP 2.6.1.1 GO:0004069 ... P00509 7819232
    2683 1aib:A (2.8) BS01 PMP 2.6.1.1 GO:0004069 ... P00509 7819232
    2684 1aib:A (2.8) BS02 AKG 2.6.1.1 GO:0004069 ... P00509 7819232
    2685 1aib:B (2.8) BS01 PMP 2.6.1.1 GO:0004069 ... P00509 7819232
    2686 1aib:B (2.8) BS02 AKG 2.6.1.1 GO:0004069 ... P00509 7819232
    2687 1aic:A (2.4) BS01 PMP 2.6.1.1 GO:0004069 ... P00509 7819232
    2688 1aic:B (2.4) BS01 PMP 2.6.1.1 GO:0004069 ... P00509 7819232
    2689 1aid:A (2.2) BS01 THK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 8340363
    2690 1aid:B (2.2) BS01 THK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 8340363 MOAD: Ki=15uM
    2691 1aig:L (2.6) BS01 BCL ? GO:0009772 ... P0C0Y8 9115209
    2692 1aig:L (2.6) BS02 BCL ? GO:0009772 ... P0C0Y8 9115209
    2693 1aig:L (2.6) BS03 BPH ? GO:0009772 ... P0C0Y8 9115209
    2694 1aig:L (2.6) BS04 BPH ? GO:0009772 ... P0C0Y8 9115209
    2695 1aig:L (2.6) BS05 U10 ? GO:0009772 ... P0C0Y8 9115209
    2696 1aig:L (2.6) BS06 FE2 ? GO:0009772 ... P0C0Y8 9115209
    2697 1aig:L (2.6) BS07 BCL ? GO:0009772 ... P0C0Y8 9115209
    2698 1aig:L (2.6) BS08 U10 ? GO:0009772 ... P0C0Y8 9115209
    2699 1aig:M (2.6) BS01 BCL ? GO:0009772 ... P0C0Y9 9115209
    2700 1aig:M (2.6) BS02 BPH ? GO:0009772 ... P0C0Y9 9115209
    2701 1aig:M (2.6) BS03 BPH ? GO:0009772 ... P0C0Y9 9115209
    2702 1aig:M (2.6) BS04 FE2 ? GO:0009772 ... P0C0Y9 9115209
    2703 1aig:M (2.6) BS05 BCL ? GO:0009772 ... P0C0Y9 9115209
    2704 1aig:M (2.6) BS06 BCL ? GO:0009772 ... P0C0Y9 9115209
    2705 1aig:M (2.6) BS07 U10 ? GO:0009772 ... P0C0Y9 9115209
    2706 1aig:N (2.6) BS01 BCL ? GO:0009772 ... P0C0Y8 9115209
    2707 1aig:N (2.6) BS02 BCL ? GO:0009772 ... P0C0Y8 9115209
    2708 1aig:N (2.6) BS03 BCL ? GO:0009772 ... P0C0Y8 9115209
    2709 1aig:N (2.6) BS04 BPH ? GO:0009772 ... P0C0Y8 9115209
    2710 1aig:N (2.6) BS05 U10 ? GO:0009772 ... P0C0Y8 9115209
    2711 1aig:N (2.6) BS06 FE2 ? GO:0009772 ... P0C0Y8 9115209
    2712 1aig:N (2.6) BS07 BPH ? GO:0009772 ... P0C0Y8 9115209
    2713 1aig:N (2.6) BS08 U10 ? GO:0009772 ... P0C0Y8 9115209
    2714 1aig:O (2.6) BS01 BCL ? GO:0009772 ... P0C0Y9 9115209
    2715 1aig:O (2.6) BS02 BCL ? GO:0009772 ... P0C0Y9 9115209
    2716 1aig:O (2.6) BS03 BPH ? GO:0009772 ... P0C0Y9 9115209
    2717 1aig:O (2.6) BS04 FE2 ? GO:0009772 ... P0C0Y9 9115209
    2718 1aig:O (2.6) BS05 BCL ? GO:0009772 ... P0C0Y9 9115209
    2719 1aig:O (2.6) BS06 BPH ? GO:0009772 ... P0C0Y9 9115209
    2720 1aig:O (2.6) BS07 U10 ? GO:0009772 ... P0C0Y9 9115209
    2721 1aih:C (2.5) BS01 MG 2.7.7.-
    3.1.-.-
    GO:0003677 ... P21442 9108478
    2722 1aii:A (1.95) BS01 CA ? GO:0001786 ... P12429 9111038
    2723 1aii:A (1.95) BS02 CA ? GO:0001786 ... P12429 9111038
    2724 1aii:A (1.95) BS03 CA ? GO:0001786 ... P12429 9111038
    2725 1aii:A (1.95) BS04 CA ? GO:0001786 ... P12429 9111038
    2726 1aii:A (1.95) BS05 CA ? GO:0001786 ... P12429 9111038
    2727 1aij:L (2.2) BS01 BCL ? GO:0009772 ... P0C0Y8 9115209
    2728 1aij:L (2.2) BS02 BCL ? GO:0009772 ... P0C0Y8 9115209
    2729 1aij:L (2.2) BS03 BPH ? GO:0009772 ... P0C0Y8 9115209
    2730 1aij:L (2.2) BS04 BPH ? GO:0009772 ... P0C0Y8 9115209
    2731 1aij:L (2.2) BS05 U10 ? GO:0009772 ... P0C0Y8 9115209
    2732 1aij:L (2.2) BS06 FE2 ? GO:0009772 ... P0C0Y8 9115209
    2733 1aij:L (2.2) BS07 BCL ? GO:0009772 ... P0C0Y8 9115209
    2734 1aij:M (2.2) BS01 BCL ? GO:0009772 ... P0C0Y9 9115209
    2735 1aij:M (2.2) BS02 BPH ? GO:0009772 ... P0C0Y9 9115209
    2736 1aij:M (2.2) BS03 BPH ? GO:0009772 ... P0C0Y9 9115209
    2737 1aij:M (2.2) BS04 FE2 ? GO:0009772 ... P0C0Y9 9115209
    2738 1aij:M (2.2) BS05 BCL ? GO:0009772 ... P0C0Y9 9115209
    2739 1aij:M (2.2) BS06 BCL ? GO:0009772 ... P0C0Y9 9115209
    2740 1aij:M (2.2) BS07 U10 ? GO:0009772 ... P0C0Y9 9115209
    2741 1aij:R (2.2) BS01 BCL ? GO:0009772 ... P0C0Y8 9115209
    2742 1aij:R (2.2) BS02 BCL ? GO:0009772 ... P0C0Y8 9115209
    2743 1aij:R (2.2) BS03 BPH ? GO:0009772 ... P0C0Y8 9115209
    2744 1aij:R (2.2) BS04 U10 ? GO:0009772 ... P0C0Y8 9115209
    2745 1aij:R (2.2) BS05 FE2 ? GO:0009772 ... P0C0Y8 9115209
    2746 1aij:R (2.2) BS06 BCL ? GO:0009772 ... P0C0Y8 9115209
    2747 1aij:R (2.2) BS07 BPH ? GO:0009772 ... P0C0Y8 9115209
    2748 1aij:S (2.2) BS01 BCL ? GO:0009772 ... P0C0Y9 9115209
    2749 1aij:S (2.2) BS02 BPH ? GO:0009772 ... P0C0Y9 9115209
    2750 1aij:S (2.2) BS03 FE2 ? GO:0009772 ... P0C0Y9 9115209
    2751 1aij:S (2.2) BS04 BCL ? GO:0009772 ... P0C0Y9 9115209
    2752 1aij:S (2.2) BS05 BCL ? GO:0009772 ... P0C0Y9 9115209
    2753 1aij:S (2.2) BS06 BPH ? GO:0009772 ... P0C0Y9 9115209
    2754 1aij:S (2.2) BS07 U10 ? GO:0009772 ... P0C0Y9 9115209
    2755 1aim:A (2.0) BS01 ZYA 3.4.22.51 GO:0006508 ... P25779 9260273
    2756 1aiq:A (2.2) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 9416600
    2757 1aiq:B (2.2) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 9416600
    2758 1ais:A (2.1) BS01 dna ? GO:0003677 ... P62001 9177165
    2759 1ais:A (2.1) BS02 dna ? GO:0003677 ... P62001 9177165
    2760 1ais:B (2.1) BS01 dna ? GO:0006352 ... P61999 9177165
    2761 1aix:H (2.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 1304349
    2762 1aix:H (2.1) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 1304349
    2763 1aix:H (2.1) BS03 T19 3.4.21.5 GO:0004252 ... P00734 1304349
    2764 1aiy:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2765 1aiy:B (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2766 1aiy:D (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2767 1aiy:D (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2768 1aiy:F (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2769 1aiy:F (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2770 1aiy:H (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2771 1aiy:H (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2772 1aiy:J (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2773 1aiy:J (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2774 1aiy:L (-1.00) BS01 peptide ? GO:0005179 ... P01308 9235985
    2775 1aiy:L (-1.00) BS02 peptide ? GO:0005179 ... P01308 9235985
    2776 1aj0:A (2.0) BS01 PH2 2.5.1.15 GO:0004156 ... P0AC13 9187658
    2777 1aj0:A (2.0) BS02 SAN 2.5.1.15 GO:0004156 ... P0AC13 9187658
    2778 1aj2:A (2.0) BS01 2PH 2.5.1.15 GO:0004156 ... P0AC13 9187658
    2779 1aj4:A (-1.00) BS01 CA ? GO:0003009 ... P09860 9218458
    2780 1aj4:A (-1.00) BS02 CA ? GO:0003009 ... P09860 9218458
    2781 1aj4:A (-1.00) BS03 CA ? GO:0003009 ... P09860 9218458
    2782 1aj6:A (2.3) BS01 NOV 5.6.2.2 GO:0003677 ... P0AES6 9245398 MOAD: Kd=1.2uM
    BindingDB: IC50=170nM, Kd=7.0nM, Ki=7.0nM
    2783 1aj7:H (2.1) BS01 NPE ? N/A P01857 9180069 MOAD: Kd=135uM
    2784 1aj7:L (2.1) BS01 NPE N/A N/A N/A 9180069
    2785 1aj8:A (1.9) BS01 COA 2.3.3.16 GO:0005737 ... Q53554 9254593
    2786 1aj8:B (1.9) BS01 COA 2.3.3.16 GO:0005737 ... Q53554 9254593
    2787 1aj9:A (2.2) BS01 PO4 ? GO:0004601 ... P69905 9761903
    2788 1aj9:A (2.2) BS02 HEM ? GO:0004601 ... P69905 9761903
    2789 1aj9:B (2.2) BS01 HEM ? GO:0004601 ... P68871 9761903
    2790 1ajb:A (2.5) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 8746724
    2791 1ajb:A (2.5) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 8746724
    2792 1ajb:A (2.5) BS03 MG 3.1.3.1 GO:0000287 ... P00634 8746724
    2793 1ajb:B (2.5) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 8746724
    2794 1ajb:B (2.5) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 8746724
    2795 1ajb:B (2.5) BS03 MG 3.1.3.1 GO:0000287 ... P00634 8746724
    2796 1ajc:A (2.5) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 7577993
    2797 1ajc:A (2.5) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 7577993
    2798 1ajc:A (2.5) BS03 MG 3.1.3.1 GO:0000287 ... P00634 7577993
    2799 1ajc:B (2.5) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 7577993
    2800 1ajc:B (2.5) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 7577993

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).