SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    283201 4v5c:BN (3.3) BS02 MG ? GO:0003729 ... P60488 19363482
    283202 4v5c:BO (3.3) BS01 rna ? GO:0003735 ... Q5SHP8 19363482
    283203 4v5c:BO (3.3) BS02 rna ? GO:0003735 ... Q5SHP8 19363482
    283204 4v5c:BP (3.3) BS01 rna ? GO:0003735 ... Q5SHQ7 19363482
    283205 4v5c:BP (3.3) BS02 MG ? GO:0003735 ... Q5SHQ7 19363482
    283206 4v5c:BQ (3.3) BS01 rna ? GO:0000049 ... P60489 19363482
    283207 4v5c:BR (3.3) BS01 rna ? GO:0003735 ... Q9Z9H5 19363482
    283208 4v5c:BS (3.3) BS01 rna ? GO:0003735 ... Q5SHQ4 19363482
    283209 4v5c:BS (3.3) BS02 rna ? GO:0003735 ... Q5SHQ4 19363482
    283210 4v5c:BT (3.3) BS01 rna ? GO:0003735 ... P60490 19363482
    283211 4v5c:BT (3.3) BS02 rna ? GO:0003735 ... P60490 19363482
    283212 4v5c:BU (3.3) BS01 rna ? GO:0000027 ... P60491 19363482
    283213 4v5c:BV (3.3) BS01 rna ? GO:0003723 ... P60492 19363482
    283214 4v5c:BV (3.3) BS02 MG ? GO:0003723 ... P60492 19363482
    283215 4v5c:BV (3.3) BS03 MG ? GO:0003723 ... P60492 19363482
    283216 4v5c:BW (3.3) BS01 rna ? GO:0003735 ... Q5SHP3 19363482
    283217 4v5c:BX (3.3) BS01 rna ? GO:0003735 ... Q5SHP0 19363482
    283218 4v5c:BX (3.3) BS02 MG ? GO:0003735 ... Q5SHP0 19363482
    283219 4v5c:BY (3.3) BS01 rna ? GO:0003723 ... Q5SHP9 19363482
    283220 4v5c:BZ (3.3) BS01 rna ? GO:0003723 ... Q5SHZ1 19363482
    283221 4v5c:BZ (3.3) BS02 rna ? GO:0003723 ... Q5SHZ1 19363482
    283222 4v5c:CB (3.3) BS01 rna ? GO:0003735 ... P80371 19363482
    283223 4v5c:CC (3.3) BS01 rna ? GO:0003676 ... P80372 19363482
    283224 4v5c:CD (3.3) BS01 rna ? GO:0003723 ... P80373 19363482
    283225 4v5c:CD (3.3) BS02 ZN ? GO:0003723 ... P80373 19363482
    283226 4v5c:CE (3.3) BS01 rna ? GO:0003723 ... Q5SHQ5 19363482
    283227 4v5c:CF (3.3) BS01 rna ? GO:0003735 ... Q5SLP8 19363482
    283228 4v5c:CG (3.3) BS01 rna ? GO:0000049 ... P17291 19363482
    283229 4v5c:CG (3.3) BS02 rna ? GO:0000049 ... P17291 19363482
    283230 4v5c:CG (3.3) BS03 rna ? GO:0000049 ... P17291 19363482
    283231 4v5c:CH (3.3) BS01 rna N/A GO:0003735 ... N/A 19363482
    283232 4v5c:CI (3.3) BS01 rna ? GO:0000049 ... P62669 19363482
    283233 4v5c:CJ (3.3) BS01 rna ? GO:0000049 ... Q5SHN7 19363482
    283234 4v5c:CK (3.3) BS01 rna ? GO:0003735 ... P80376 19363482
    283235 4v5c:CL (3.3) BS01 rna ? GO:0000049 ... Q5SHN3 19363482
    283236 4v5c:CM (3.3) BS01 rna ? GO:0000049 ... P80377 19363482
    283237 4v5c:CM (3.3) BS02 rna ? GO:0000049 ... P80377 19363482
    283238 4v5c:CM (3.3) BS03 rna ? GO:0000049 ... P80377 19363482
    283239 4v5c:CN (3.3) BS01 rna N/A GO:0003735 ... N/A 19363482
    283240 4v5c:CN (3.3) BS02 ZN N/A GO:0003735 ... N/A 19363482
    283241 4v5c:CO (3.3) BS01 rna ? GO:0003735 ... Q5SJ76 19363482
    283242 4v5c:CO (3.3) BS02 rna ? GO:0003735 ... Q5SJ76 19363482
    283243 4v5c:CP (3.3) BS01 rna ? GO:0003735 ... Q5SJH3 19363482
    283244 4v5c:CQ (3.3) BS01 rna N/A GO:0003735 ... N/A 19363482
    283245 4v5c:CR (3.3) BS01 rna ? GO:0003735 ... Q5SLQ0 19363482
    283246 4v5c:CS (3.3) BS01 rna ? GO:0000028 ... Q5SHP2 19363482
    283247 4v5c:CT (3.3) BS01 rna ? GO:0003723 ... P80380 19363482
    283248 4v5c:D0 (3.3) BS01 rna ? GO:0003735 ... P60493 19363482
    283249 4v5c:D0 (3.3) BS02 rna ? GO:0003735 ... P60493 19363482
    283250 4v5c:D0 (3.3) BS03 rna ? GO:0003735 ... P60493 19363482
    283251 4v5c:D1 (3.3) BS01 rna ? GO:0003735 ... P60494 19363482
    283252 4v5c:D1 (3.3) BS02 MG ? GO:0003735 ... P60494 19363482
    283253 4v5c:D2 (3.3) BS01 rna ? GO:0003735 ... Q5SHP6 19363482
    283254 4v5c:D2 (3.3) BS02 MG ? GO:0003735 ... Q5SHP6 19363482
    283255 4v5c:D3 (3.3) BS01 rna ? GO:0003735 ... Q5SHQ6 19363482
    283256 4v5c:D3 (3.3) BS02 rna ? GO:0003735 ... Q5SHQ6 19363482
    283257 4v5c:D5 (3.3) BS01 rna ? GO:0003735 ... P80339 19363482
    283258 4v5c:D6 (3.3) BS01 rna ? GO:0000049 ... P35871 19363482
    283259 4v5c:D7 (3.3) BS01 rna ? GO:0003735 ... P80340 19363482
    283260 4v5c:D7 (3.3) BS02 MG ? GO:0003735 ... P80340 19363482
    283261 4v5c:D8 (3.3) BS01 rna ? GO:0003735 ... Q5SKU1 19363482
    283262 4v5c:D9 (3.3) BS01 rna ? GO:0003735 ... Q5SHR2 19363482
    283263 4v5c:D9 (3.3) BS02 ZN ? GO:0003735 ... Q5SHR2 19363482
    283264 4v5c:DC (3.3) BS01 rna ? GO:0000049 ... Q5SLP7 19363482
    283265 4v5c:DC (3.3) BS02 rna ? GO:0000049 ... Q5SLP7 19363482
    283266 4v5c:DD (3.3) BS01 rna ? GO:0002181 ... P60405 19363482
    283267 4v5c:DD (3.3) BS02 MG ? GO:0002181 ... P60405 19363482
    283268 4v5c:DE (3.3) BS01 rna ? GO:0003735 ... Q5SHN8 19363482
    283269 4v5c:DF (3.3) BS01 rna ? GO:0003735 ... Q5SHN9 19363482
    283270 4v5c:DF (3.3) BS02 MG ? GO:0003735 ... Q5SHN9 19363482
    283271 4v5c:DG (3.3) BS01 rna ? GO:0000049 ... Q5SHQ0 19363482
    283272 4v5c:DG (3.3) BS02 rna ? GO:0000049 ... Q5SHQ0 19363482
    283273 4v5c:DG (3.3) BS03 rna ? GO:0000049 ... Q5SHQ0 19363482
    283274 4v5c:DH (3.3) BS01 rna N/A GO:0003735 ... N/A 19363482
    283275 4v5c:DI (3.3) BS01 rna ? GO:0003735 ... Q5SLQ1 19363482
    283276 4v5c:DN (3.3) BS01 rna ? GO:0003729 ... P60488 19363482
    283277 4v5c:DN (3.3) BS02 MG ? GO:0003729 ... P60488 19363482
    283278 4v5c:DO (3.3) BS01 rna ? GO:0003735 ... Q5SHP8 19363482
    283279 4v5c:DO (3.3) BS02 rna ? GO:0003735 ... Q5SHP8 19363482
    283280 4v5c:DP (3.3) BS01 rna ? GO:0003735 ... Q5SHQ7 19363482
    283281 4v5c:DQ (3.3) BS01 rna ? GO:0000049 ... P60489 19363482
    283282 4v5c:DR (3.3) BS01 rna ? GO:0003735 ... Q9Z9H5 19363482
    283283 4v5c:DS (3.3) BS01 rna ? GO:0003735 ... Q5SHQ4 19363482
    283284 4v5c:DS (3.3) BS02 rna ? GO:0003735 ... Q5SHQ4 19363482
    283285 4v5c:DT (3.3) BS01 rna ? GO:0003735 ... P60490 19363482
    283286 4v5c:DT (3.3) BS02 rna ? GO:0003735 ... P60490 19363482
    283287 4v5c:DU (3.3) BS01 rna ? GO:0000027 ... P60491 19363482
    283288 4v5c:DV (3.3) BS01 rna ? GO:0003723 ... P60492 19363482
    283289 4v5c:DV (3.3) BS02 MG ? GO:0003723 ... P60492 19363482
    283290 4v5c:DW (3.3) BS01 rna ? GO:0003735 ... Q5SHP3 19363482
    283291 4v5c:DX (3.3) BS01 rna ? GO:0003735 ... Q5SHP0 19363482
    283292 4v5c:DX (3.3) BS02 MG ? GO:0003735 ... Q5SHP0 19363482
    283293 4v5c:DY (3.3) BS01 rna ? GO:0003723 ... Q5SHP9 19363482
    283294 4v5c:DZ (3.3) BS01 rna ? GO:0003723 ... Q5SHZ1 19363482
    283295 4v5c:DZ (3.3) BS02 rna ? GO:0003723 ... Q5SHZ1 19363482
    283296 4v5c:DZ (3.3) BS03 rna ? GO:0003723 ... Q5SHZ1 19363482
    283297 4v5d:AB (3.5) BS01 rna ? GO:0003735 ... P80371 19363482
    283298 4v5d:AC (3.5) BS01 rna ? GO:0003676 ... P80372 19363482
    283299 4v5d:AD (3.5) BS01 rna ? GO:0003723 ... P80373 19363482
    283300 4v5d:AD (3.5) BS02 ZN ? GO:0003723 ... P80373 19363482
    283301 4v5d:AE (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 19363482
    283302 4v5d:AE (3.5) BS02 MG ? GO:0003723 ... Q5SHQ5 19363482
    283303 4v5d:AF (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 19363482
    283304 4v5d:AG (3.5) BS01 rna ? GO:0000049 ... P17291 19363482
    283305 4v5d:AG (3.5) BS02 rna ? GO:0000049 ... P17291 19363482
    283306 4v5d:AH (3.5) BS01 rna N/A GO:0003735 ... N/A 19363482
    283307 4v5d:AI (3.5) BS01 rna ? GO:0000049 ... P62669 19363482
    283308 4v5d:AI (3.5) BS02 rna ? GO:0000049 ... P62669 19363482
    283309 4v5d:AJ (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 19363482
    283310 4v5d:AK (3.5) BS01 rna ? GO:0003735 ... P80376 19363482
    283311 4v5d:AL (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 19363482
    283312 4v5d:AM (3.5) BS01 rna ? GO:0000049 ... P80377 19363482
    283313 4v5d:AM (3.5) BS02 rna ? GO:0000049 ... P80377 19363482
    283314 4v5d:AM (3.5) BS03 rna ? GO:0000049 ... P80377 19363482
    283315 4v5d:AM (3.5) BS04 rna ? GO:0000049 ... P80377 19363482
    283316 4v5d:AN (3.5) BS01 rna N/A GO:0003735 ... N/A 19363482
    283317 4v5d:AN (3.5) BS02 ZN N/A GO:0003735 ... N/A 19363482
    283318 4v5d:AO (3.5) BS01 rna ? GO:0003735 ... Q5SJ76 19363482
    283319 4v5d:AO (3.5) BS02 rna ? GO:0003735 ... Q5SJ76 19363482
    283320 4v5d:AP (3.5) BS01 rna ? GO:0003735 ... Q5SJH3 19363482
    283321 4v5d:AQ (3.5) BS01 rna N/A GO:0003735 ... N/A 19363482
    283322 4v5d:AR (3.5) BS01 rna ? GO:0003735 ... Q5SLQ0 19363482
    283323 4v5d:AS (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 19363482
    283324 4v5d:AT (3.5) BS01 rna ? GO:0003723 ... P80380 19363482
    283325 4v5d:B0 (3.5) BS01 rna ? GO:0003735 ... P60493 19363482
    283326 4v5d:B0 (3.5) BS02 rna ? GO:0003735 ... P60493 19363482
    283327 4v5d:B0 (3.5) BS03 rna ? GO:0003735 ... P60493 19363482
    283328 4v5d:B1 (3.5) BS01 rna ? GO:0003735 ... P60494 19363482
    283329 4v5d:B2 (3.5) BS01 rna ? GO:0003735 ... Q5SHP6 19363482
    283330 4v5d:B2 (3.5) BS02 MG ? GO:0003735 ... Q5SHP6 19363482
    283331 4v5d:B3 (3.5) BS01 rna ? GO:0003735 ... Q5SHQ6 19363482
    283332 4v5d:B5 (3.5) BS01 rna ? GO:0003735 ... P80339 19363482
    283333 4v5d:B6 (3.5) BS01 rna ? GO:0000049 ... P35871 19363482
    283334 4v5d:B7 (3.5) BS01 rna ? GO:0003735 ... P80340 19363482
    283335 4v5d:B8 (3.5) BS01 rna ? GO:0003735 ... Q5SKU1 19363482
    283336 4v5d:B9 (3.5) BS01 rna ? GO:0003735 ... Q5SHR2 19363482
    283337 4v5d:BC (3.5) BS01 rna ? GO:0000049 ... Q5SLP7 19363482
    283338 4v5d:BD (3.5) BS01 rna ? GO:0002181 ... P60405 19363482
    283339 4v5d:BD (3.5) BS02 MG ? GO:0002181 ... P60405 19363482
    283340 4v5d:BD (3.5) BS03 MG ? GO:0002181 ... P60405 19363482
    283341 4v5d:BE (3.5) BS01 rna ? GO:0003735 ... Q5SHN8 19363482
    283342 4v5d:BF (3.5) BS01 rna ? GO:0003735 ... Q5SHN9 19363482
    283343 4v5d:BG (3.5) BS01 rna ? GO:0000049 ... Q5SHQ0 19363482
    283344 4v5d:BG (3.5) BS02 rna ? GO:0000049 ... Q5SHQ0 19363482
    283345 4v5d:BG (3.5) BS03 rna ? GO:0000049 ... Q5SHQ0 19363482
    283346 4v5d:BH (3.5) BS01 rna N/A GO:0003735 ... N/A 19363482
    283347 4v5d:BI (3.5) BS01 rna ? GO:0003735 ... Q5SLQ1 19363482
    283348 4v5d:BN (3.5) BS01 rna ? GO:0003729 ... P60488 19363482
    283349 4v5d:BO (3.5) BS01 rna ? GO:0003735 ... Q5SHP8 19363482
    283350 4v5d:BO (3.5) BS02 rna ? GO:0003735 ... Q5SHP8 19363482
    283351 4v5d:BP (3.5) BS01 rna ? GO:0003735 ... Q5SHQ7 19363482
    283352 4v5d:BQ (3.5) BS01 rna ? GO:0000049 ... P60489 19363482
    283353 4v5d:BQ (3.5) BS02 rna ? GO:0000049 ... P60489 19363482
    283354 4v5d:BQ (3.5) BS03 rna ? GO:0000049 ... P60489 19363482
    283355 4v5d:BR (3.5) BS01 rna ? GO:0003735 ... Q9Z9H5 19363482
    283356 4v5d:BR (3.5) BS02 MG ? GO:0003735 ... Q9Z9H5 19363482
    283357 4v5d:BS (3.5) BS01 rna ? GO:0003735 ... Q5SHQ4 19363482
    283358 4v5d:BS (3.5) BS02 rna ? GO:0003735 ... Q5SHQ4 19363482
    283359 4v5d:BT (3.5) BS01 rna ? GO:0003735 ... P60490 19363482
    283360 4v5d:BT (3.5) BS02 rna ? GO:0003735 ... P60490 19363482
    283361 4v5d:BU (3.5) BS01 rna ? GO:0000027 ... P60491 19363482
    283362 4v5d:BV (3.5) BS01 rna ? GO:0003723 ... P60492 19363482
    283363 4v5d:BW (3.5) BS01 rna ? GO:0003735 ... Q5SHP3 19363482
    283364 4v5d:BX (3.5) BS01 rna ? GO:0003735 ... Q5SHP0 19363482
    283365 4v5d:BX (3.5) BS02 MG ? GO:0003735 ... Q5SHP0 19363482
    283366 4v5d:BY (3.5) BS01 rna ? GO:0003723 ... Q5SHP9 19363482
    283367 4v5d:BZ (3.5) BS01 rna ? GO:0003723 ... Q5SHZ1 19363482
    283368 4v5d:BZ (3.5) BS02 rna ? GO:0003723 ... Q5SHZ1 19363482
    283369 4v5d:CB (3.5) BS01 rna ? GO:0003735 ... P80371 19363482
    283370 4v5d:CC (3.5) BS01 rna ? GO:0003676 ... P80372 19363482
    283371 4v5d:CD (3.5) BS01 rna ? GO:0003723 ... P80373 19363482
    283372 4v5d:CD (3.5) BS02 ZN ? GO:0003723 ... P80373 19363482
    283373 4v5d:CE (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 19363482
    283374 4v5d:CE (3.5) BS02 MG ? GO:0003723 ... Q5SHQ5 19363482
    283375 4v5d:CF (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 19363482
    283376 4v5d:CG (3.5) BS01 rna ? GO:0000049 ... P17291 19363482
    283377 4v5d:CG (3.5) BS02 rna ? GO:0000049 ... P17291 19363482
    283378 4v5d:CH (3.5) BS01 rna N/A GO:0003735 ... N/A 19363482
    283379 4v5d:CI (3.5) BS01 rna ? GO:0000049 ... P62669 19363482
    283380 4v5d:CI (3.5) BS02 rna ? GO:0000049 ... P62669 19363482
    283381 4v5d:CJ (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 19363482
    283382 4v5d:CK (3.5) BS01 rna ? GO:0003735 ... P80376 19363482
    283383 4v5d:CL (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 19363482
    283384 4v5d:CM (3.5) BS01 rna ? GO:0000049 ... P80377 19363482
    283385 4v5d:CM (3.5) BS02 rna ? GO:0000049 ... P80377 19363482
    283386 4v5d:CN (3.5) BS01 rna N/A GO:0003735 ... N/A 19363482
    283387 4v5d:CN (3.5) BS02 ZN N/A GO:0003735 ... N/A 19363482
    283388 4v5d:CO (3.5) BS01 rna ? GO:0003735 ... Q5SJ76 19363482
    283389 4v5d:CO (3.5) BS02 rna ? GO:0003735 ... Q5SJ76 19363482
    283390 4v5d:CP (3.5) BS01 rna ? GO:0003735 ... Q5SJH3 19363482
    283391 4v5d:CQ (3.5) BS01 rna N/A GO:0003735 ... N/A 19363482
    283392 4v5d:CR (3.5) BS01 rna ? GO:0003735 ... Q5SLQ0 19363482
    283393 4v5d:CS (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 19363482
    283394 4v5d:CT (3.5) BS01 rna ? GO:0003723 ... P80380 19363482
    283395 4v5d:D0 (3.5) BS01 rna ? GO:0003735 ... P60493 19363482
    283396 4v5d:D0 (3.5) BS02 rna ? GO:0003735 ... P60493 19363482
    283397 4v5d:D0 (3.5) BS03 rna ? GO:0003735 ... P60493 19363482
    283398 4v5d:D1 (3.5) BS01 rna ? GO:0003735 ... P60494 19363482
    283399 4v5d:D1 (3.5) BS02 rna ? GO:0003735 ... P60494 19363482
    283400 4v5d:D1 (3.5) BS03 MG ? GO:0003735 ... P60494 19363482

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).