SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    284601 4v5p:AZ (3.1) BS02 rna ? GO:0003723 ... Q5SHN6 21378964
    284602 4v5p:AZ (3.1) BS03 GDP ? GO:0003723 ... Q5SHN6 21378964
    284603 4v5p:AZ (3.1) BS04 KIR ? GO:0003723 ... Q5SHN6 21378964
    284604 4v5p:B0 (3.1) BS01 rna ? GO:0003735 ... P60493 21378964
    284605 4v5p:B0 (3.1) BS02 rna ? GO:0003735 ... P60493 21378964
    284606 4v5p:B0 (3.1) BS03 rna ? GO:0003735 ... P60493 21378964
    284607 4v5p:B1 (3.1) BS01 rna ? GO:0003735 ... P60494 21378964
    284608 4v5p:B2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 21378964
    284609 4v5p:B3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 21378964
    284610 4v5p:B5 (3.1) BS01 rna ? GO:0003735 ... P80339 21378964
    284611 4v5p:B6 (3.1) BS01 rna ? GO:0000049 ... P35871 21378964
    284612 4v5p:B7 (3.1) BS01 rna ? GO:0003735 ... P80340 21378964
    284613 4v5p:B8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 21378964
    284614 4v5p:B9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 21378964
    284615 4v5p:B9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 21378964
    284616 4v5p:BC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 21378964
    284617 4v5p:BC (3.1) BS02 rna ? GO:0000049 ... Q5SLP7 21378964
    284618 4v5p:BD (3.1) BS01 rna ? GO:0002181 ... P60405 21378964
    284619 4v5p:BE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 21378964
    284620 4v5p:BF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 21378964
    284621 4v5p:BG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 21378964
    284622 4v5p:BG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 21378964
    284623 4v5p:BG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 21378964
    284624 4v5p:BH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284625 4v5p:BJ (3.1) BS01 rna N/A N/A N/A 21378964
    284626 4v5p:BK (3.1) BS01 rna N/A N/A N/A 21378964
    284627 4v5p:BN (3.1) BS01 rna ? GO:0003729 ... P60488 21378964
    284628 4v5p:BO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 21378964
    284629 4v5p:BO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 21378964
    284630 4v5p:BP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 21378964
    284631 4v5p:BQ (3.1) BS01 rna ? GO:0000049 ... P60489 21378964
    284632 4v5p:BQ (3.1) BS02 rna ? GO:0000049 ... P60489 21378964
    284633 4v5p:BR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 21378964
    284634 4v5p:BS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 21378964
    284635 4v5p:BS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 21378964
    284636 4v5p:BT (3.1) BS01 rna ? GO:0003735 ... P60490 21378964
    284637 4v5p:BT (3.1) BS02 rna ? GO:0003735 ... P60490 21378964
    284638 4v5p:BU (3.1) BS01 rna ? GO:0000027 ... P60491 21378964
    284639 4v5p:BV (3.1) BS01 rna ? GO:0003723 ... P60492 21378964
    284640 4v5p:BW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 21378964
    284641 4v5p:BX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 21378964
    284642 4v5p:BY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 21378964
    284643 4v5p:BZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 21378964
    284644 4v5p:BZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 21378964
    284645 4v5p:CB (3.1) BS01 rna ? GO:0003735 ... P80371 21378964
    284646 4v5p:CC (3.1) BS01 rna ? GO:0003676 ... P80372 21378964
    284647 4v5p:CD (3.1) BS01 rna ? GO:0003723 ... P80373 21378964
    284648 4v5p:CD (3.1) BS02 ZN ? GO:0003723 ... P80373 21378964
    284649 4v5p:CE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 21378964
    284650 4v5p:CF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 21378964
    284651 4v5p:CG (3.1) BS01 rna ? GO:0000049 ... P17291 21378964
    284652 4v5p:CG (3.1) BS02 rna ? GO:0000049 ... P17291 21378964
    284653 4v5p:CH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284654 4v5p:CI (3.1) BS01 rna ? GO:0000049 ... P80374 21378964
    284655 4v5p:CJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 21378964
    284656 4v5p:CK (3.1) BS01 rna ? GO:0003735 ... P80376 21378964
    284657 4v5p:CL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 21378964
    284658 4v5p:CM (3.1) BS01 rna ? GO:0000049 ... P80377 21378964
    284659 4v5p:CM (3.1) BS02 rna ? GO:0000049 ... P80377 21378964
    284660 4v5p:CN (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284661 4v5p:CN (3.1) BS02 ZN N/A GO:0003735 ... N/A 21378964
    284662 4v5p:CO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 21378964
    284663 4v5p:CO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 21378964
    284664 4v5p:CP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 21378964
    284665 4v5p:CQ (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284666 4v5p:CR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 21378964
    284667 4v5p:CS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 21378964
    284668 4v5p:CT (3.1) BS01 rna ? GO:0003723 ... P80380 21378964
    284669 4v5p:CZ (3.1) BS01 rna ? GO:0003723 ... Q5SHN6 21378964
    284670 4v5p:CZ (3.1) BS02 rna ? GO:0003723 ... Q5SHN6 21378964
    284671 4v5p:CZ (3.1) BS03 rna ? GO:0003723 ... Q5SHN6 21378964
    284672 4v5p:CZ (3.1) BS04 GDP ? GO:0003723 ... Q5SHN6 21378964
    284673 4v5p:CZ (3.1) BS05 KIR ? GO:0003723 ... Q5SHN6 21378964
    284674 4v5p:D0 (3.1) BS01 rna ? GO:0003735 ... P60493 21378964
    284675 4v5p:D0 (3.1) BS02 rna ? GO:0003735 ... P60493 21378964
    284676 4v5p:D0 (3.1) BS03 rna ? GO:0003735 ... P60493 21378964
    284677 4v5p:D1 (3.1) BS01 rna ? GO:0003735 ... P60494 21378964
    284678 4v5p:D2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 21378964
    284679 4v5p:D3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 21378964
    284680 4v5p:D3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 21378964
    284681 4v5p:D4 (3.1) BS01 ZN ? GO:0003735 ... Q5SJE1 21378964
    284682 4v5p:D5 (3.1) BS01 rna ? GO:0003735 ... P80339 21378964
    284683 4v5p:D6 (3.1) BS01 rna ? GO:0000049 ... P35871 21378964
    284684 4v5p:D7 (3.1) BS01 rna ? GO:0003735 ... P80340 21378964
    284685 4v5p:D8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 21378964
    284686 4v5p:D9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 21378964
    284687 4v5p:D9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 21378964
    284688 4v5p:DC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 21378964
    284689 4v5p:DC (3.1) BS02 rna ? GO:0000049 ... Q5SLP7 21378964
    284690 4v5p:DD (3.1) BS01 rna ? GO:0002181 ... P60405 21378964
    284691 4v5p:DD (3.1) BS02 rna ? GO:0002181 ... P60405 21378964
    284692 4v5p:DE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 21378964
    284693 4v5p:DF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 21378964
    284694 4v5p:DG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 21378964
    284695 4v5p:DG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 21378964
    284696 4v5p:DG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 21378964
    284697 4v5p:DH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284698 4v5p:DJ (3.1) BS01 rna N/A N/A N/A 21378964
    284699 4v5p:DK (3.1) BS01 rna N/A N/A N/A 21378964
    284700 4v5p:DN (3.1) BS01 rna ? GO:0003729 ... P60488 21378964
    284701 4v5p:DO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 21378964
    284702 4v5p:DO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 21378964
    284703 4v5p:DP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 21378964
    284704 4v5p:DQ (3.1) BS01 rna ? GO:0000049 ... P60489 21378964
    284705 4v5p:DQ (3.1) BS02 rna ? GO:0000049 ... P60489 21378964
    284706 4v5p:DR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 21378964
    284707 4v5p:DS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 21378964
    284708 4v5p:DS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 21378964
    284709 4v5p:DT (3.1) BS01 rna ? GO:0003735 ... P60490 21378964
    284710 4v5p:DT (3.1) BS02 rna ? GO:0003735 ... P60490 21378964
    284711 4v5p:DU (3.1) BS01 rna ? GO:0000027 ... P60491 21378964
    284712 4v5p:DV (3.1) BS01 rna ? GO:0003723 ... P60492 21378964
    284713 4v5p:DW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 21378964
    284714 4v5p:DX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 21378964
    284715 4v5p:DY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 21378964
    284716 4v5p:DZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 21378964
    284717 4v5p:DZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 21378964
    284718 4v5q:AB (3.1) BS01 rna ? GO:0003735 ... P80371 21378964
    284719 4v5q:AC (3.1) BS01 rna ? GO:0003676 ... P80372 21378964
    284720 4v5q:AD (3.1) BS01 rna ? GO:0003723 ... P80373 21378964
    284721 4v5q:AD (3.1) BS02 ZN ? GO:0003723 ... P80373 21378964
    284722 4v5q:AE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 21378964
    284723 4v5q:AF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 21378964
    284724 4v5q:AG (3.1) BS01 rna ? GO:0000049 ... P17291 21378964
    284725 4v5q:AG (3.1) BS02 rna ? GO:0000049 ... P17291 21378964
    284726 4v5q:AH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284727 4v5q:AI (3.1) BS01 rna ? GO:0000049 ... P80374 21378964
    284728 4v5q:AJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 21378964
    284729 4v5q:AK (3.1) BS01 rna ? GO:0003735 ... P80376 21378964
    284730 4v5q:AL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 21378964
    284731 4v5q:AM (3.1) BS01 rna ? GO:0000049 ... P80377 21378964
    284732 4v5q:AM (3.1) BS02 rna ? GO:0000049 ... P80377 21378964
    284733 4v5q:AN (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284734 4v5q:AN (3.1) BS02 ZN N/A GO:0003735 ... N/A 21378964
    284735 4v5q:AO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 21378964
    284736 4v5q:AO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 21378964
    284737 4v5q:AP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 21378964
    284738 4v5q:AQ (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284739 4v5q:AR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 21378964
    284740 4v5q:AS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 21378964
    284741 4v5q:AT (3.1) BS01 rna ? GO:0003723 ... P80380 21378964
    284742 4v5q:AZ (3.1) BS01 rna ? GO:0003723 ... Q5SHN6 21378964
    284743 4v5q:AZ (3.1) BS02 rna ? GO:0003723 ... Q5SHN6 21378964
    284744 4v5q:AZ (3.1) BS03 GDP ? GO:0003723 ... Q5SHN6 21378964
    284745 4v5q:AZ (3.1) BS04 KIR ? GO:0003723 ... Q5SHN6 21378964
    284746 4v5q:B0 (3.1) BS01 rna ? GO:0003735 ... P60493 21378964
    284747 4v5q:B0 (3.1) BS02 rna ? GO:0003735 ... P60493 21378964
    284748 4v5q:B1 (3.1) BS01 rna ? GO:0003735 ... P60494 21378964
    284749 4v5q:B2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 21378964
    284750 4v5q:B3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 21378964
    284751 4v5q:B3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 21378964
    284752 4v5q:B4 (3.1) BS01 ZN ? GO:0003735 ... Q5SJE1 21378964
    284753 4v5q:B5 (3.1) BS01 rna ? GO:0003735 ... P80339 21378964
    284754 4v5q:B6 (3.1) BS01 rna ? GO:0000049 ... P35871 21378964
    284755 4v5q:B7 (3.1) BS01 rna ? GO:0003735 ... P80340 21378964
    284756 4v5q:B8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 21378964
    284757 4v5q:B9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 21378964
    284758 4v5q:B9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 21378964
    284759 4v5q:BC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 21378964
    284760 4v5q:BC (3.1) BS02 rna ? GO:0000049 ... Q5SLP7 21378964
    284761 4v5q:BD (3.1) BS01 rna ? GO:0002181 ... P60405 21378964
    284762 4v5q:BD (3.1) BS02 rna ? GO:0002181 ... P60405 21378964
    284763 4v5q:BE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 21378964
    284764 4v5q:BF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 21378964
    284765 4v5q:BG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 21378964
    284766 4v5q:BG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 21378964
    284767 4v5q:BG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 21378964
    284768 4v5q:BH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284769 4v5q:BJ (3.1) BS01 rna N/A N/A N/A 21378964
    284770 4v5q:BK (3.1) BS01 rna N/A N/A N/A 21378964
    284771 4v5q:BN (3.1) BS01 rna ? GO:0003729 ... P60488 21378964
    284772 4v5q:BO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 21378964
    284773 4v5q:BO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 21378964
    284774 4v5q:BP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 21378964
    284775 4v5q:BQ (3.1) BS01 rna ? GO:0000049 ... P60489 21378964
    284776 4v5q:BQ (3.1) BS02 rna ? GO:0000049 ... P60489 21378964
    284777 4v5q:BR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 21378964
    284778 4v5q:BS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 21378964
    284779 4v5q:BS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 21378964
    284780 4v5q:BT (3.1) BS01 rna ? GO:0003735 ... P60490 21378964
    284781 4v5q:BT (3.1) BS02 rna ? GO:0003735 ... P60490 21378964
    284782 4v5q:BU (3.1) BS01 rna ? GO:0000027 ... P60491 21378964
    284783 4v5q:BV (3.1) BS01 rna ? GO:0003723 ... P60492 21378964
    284784 4v5q:BW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 21378964
    284785 4v5q:BX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 21378964
    284786 4v5q:BY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 21378964
    284787 4v5q:BZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 21378964
    284788 4v5q:BZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 21378964
    284789 4v5q:CB (3.1) BS01 rna ? GO:0003735 ... P80371 21378964
    284790 4v5q:CC (3.1) BS01 rna ? GO:0003676 ... P80372 21378964
    284791 4v5q:CD (3.1) BS01 rna ? GO:0003723 ... P80373 21378964
    284792 4v5q:CD (3.1) BS02 ZN ? GO:0003723 ... P80373 21378964
    284793 4v5q:CE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 21378964
    284794 4v5q:CF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 21378964
    284795 4v5q:CG (3.1) BS01 rna ? GO:0000049 ... P17291 21378964
    284796 4v5q:CG (3.1) BS02 rna ? GO:0000049 ... P17291 21378964
    284797 4v5q:CH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284798 4v5q:CI (3.1) BS01 rna ? GO:0000049 ... P80374 21378964
    284799 4v5q:CJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 21378964
    284800 4v5q:CK (3.1) BS01 rna ? GO:0003735 ... P80376 21378964

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).