SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    284801 4v5q:CL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 21378964
    284802 4v5q:CM (3.1) BS01 rna ? GO:0000049 ... P80377 21378964
    284803 4v5q:CM (3.1) BS02 rna ? GO:0000049 ... P80377 21378964
    284804 4v5q:CM (3.1) BS03 rna ? GO:0000049 ... P80377 21378964
    284805 4v5q:CN (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284806 4v5q:CN (3.1) BS02 ZN N/A GO:0003735 ... N/A 21378964
    284807 4v5q:CO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 21378964
    284808 4v5q:CO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 21378964
    284809 4v5q:CP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 21378964
    284810 4v5q:CQ (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284811 4v5q:CR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 21378964
    284812 4v5q:CS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 21378964
    284813 4v5q:CT (3.1) BS01 rna ? GO:0003723 ... P80380 21378964
    284814 4v5q:CZ (3.1) BS01 rna ? GO:0003723 ... Q5SHN6 21378964
    284815 4v5q:CZ (3.1) BS02 rna ? GO:0003723 ... Q5SHN6 21378964
    284816 4v5q:CZ (3.1) BS03 rna ? GO:0003723 ... Q5SHN6 21378964
    284817 4v5q:CZ (3.1) BS04 GDP ? GO:0003723 ... Q5SHN6 21378964
    284818 4v5q:CZ (3.1) BS05 KIR ? GO:0003723 ... Q5SHN6 21378964
    284819 4v5q:D0 (3.1) BS01 rna ? GO:0003735 ... P60493 21378964
    284820 4v5q:D0 (3.1) BS02 rna ? GO:0003735 ... P60493 21378964
    284821 4v5q:D0 (3.1) BS03 rna ? GO:0003735 ... P60493 21378964
    284822 4v5q:D1 (3.1) BS01 rna ? GO:0003735 ... P60494 21378964
    284823 4v5q:D1 (3.1) BS02 rna ? GO:0003735 ... P60494 21378964
    284824 4v5q:D2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 21378964
    284825 4v5q:D3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 21378964
    284826 4v5q:D3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 21378964
    284827 4v5q:D5 (3.1) BS01 rna ? GO:0003735 ... P80339 21378964
    284828 4v5q:D6 (3.1) BS01 rna ? GO:0000049 ... P35871 21378964
    284829 4v5q:D7 (3.1) BS01 rna ? GO:0003735 ... P80340 21378964
    284830 4v5q:D8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 21378964
    284831 4v5q:D9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 21378964
    284832 4v5q:D9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 21378964
    284833 4v5q:DC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 21378964
    284834 4v5q:DC (3.1) BS02 rna ? GO:0000049 ... Q5SLP7 21378964
    284835 4v5q:DD (3.1) BS01 rna ? GO:0002181 ... P60405 21378964
    284836 4v5q:DE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 21378964
    284837 4v5q:DF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 21378964
    284838 4v5q:DG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 21378964
    284839 4v5q:DG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 21378964
    284840 4v5q:DG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 21378964
    284841 4v5q:DH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284842 4v5q:DJ (3.1) BS01 rna N/A N/A N/A 21378964
    284843 4v5q:DK (3.1) BS01 rna N/A N/A N/A 21378964
    284844 4v5q:DN (3.1) BS01 rna ? GO:0003729 ... P60488 21378964
    284845 4v5q:DO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 21378964
    284846 4v5q:DO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 21378964
    284847 4v5q:DP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 21378964
    284848 4v5q:DQ (3.1) BS01 rna ? GO:0000049 ... P60489 21378964
    284849 4v5q:DQ (3.1) BS02 rna ? GO:0000049 ... P60489 21378964
    284850 4v5q:DR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 21378964
    284851 4v5q:DS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 21378964
    284852 4v5q:DS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 21378964
    284853 4v5q:DT (3.1) BS01 rna ? GO:0003735 ... P60490 21378964
    284854 4v5q:DT (3.1) BS02 rna ? GO:0003735 ... P60490 21378964
    284855 4v5q:DU (3.1) BS01 rna ? GO:0000027 ... P60491 21378964
    284856 4v5q:DV (3.1) BS01 rna ? GO:0003723 ... P60492 21378964
    284857 4v5q:DW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 21378964
    284858 4v5q:DX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 21378964
    284859 4v5q:DY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 21378964
    284860 4v5q:DZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 21378964
    284861 4v5q:DZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 21378964
    284862 4v5r:AB (3.1) BS01 rna ? GO:0003735 ... P80371 21378964
    284863 4v5r:AC (3.1) BS01 rna ? GO:0003676 ... P80372 21378964
    284864 4v5r:AD (3.1) BS01 rna ? GO:0003723 ... P80373 21378964
    284865 4v5r:AD (3.1) BS02 ZN ? GO:0003723 ... P80373 21378964
    284866 4v5r:AE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 21378964
    284867 4v5r:AF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 21378964
    284868 4v5r:AG (3.1) BS01 rna ? GO:0000049 ... P17291 21378964
    284869 4v5r:AG (3.1) BS02 rna ? GO:0000049 ... P17291 21378964
    284870 4v5r:AH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284871 4v5r:AI (3.1) BS01 rna ? GO:0000049 ... P80374 21378964
    284872 4v5r:AJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 21378964
    284873 4v5r:AK (3.1) BS01 rna ? GO:0003735 ... P80376 21378964
    284874 4v5r:AL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 21378964
    284875 4v5r:AL (3.1) BS02 rna ? GO:0000049 ... Q5SHN3 21378964
    284876 4v5r:AM (3.1) BS01 rna ? GO:0000049 ... P80377 21378964
    284877 4v5r:AM (3.1) BS02 rna ? GO:0000049 ... P80377 21378964
    284878 4v5r:AN (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284879 4v5r:AN (3.1) BS02 ZN N/A GO:0003735 ... N/A 21378964
    284880 4v5r:AO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 21378964
    284881 4v5r:AO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 21378964
    284882 4v5r:AP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 21378964
    284883 4v5r:AQ (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284884 4v5r:AR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 21378964
    284885 4v5r:AS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 21378964
    284886 4v5r:AT (3.1) BS01 rna ? GO:0003723 ... P80380 21378964
    284887 4v5r:AZ (3.1) BS01 rna ? GO:0003723 ... Q5SHN6 21378964
    284888 4v5r:AZ (3.1) BS02 rna ? GO:0003723 ... Q5SHN6 21378964
    284889 4v5r:AZ (3.1) BS03 rna ? GO:0003723 ... Q5SHN6 21378964
    284890 4v5r:AZ (3.1) BS04 GDP ? GO:0003723 ... Q5SHN6 21378964
    284891 4v5r:AZ (3.1) BS05 KIR ? GO:0003723 ... Q5SHN6 21378964
    284892 4v5r:B0 (3.1) BS01 rna ? GO:0003735 ... P60493 21378964
    284893 4v5r:B1 (3.1) BS01 rna ? GO:0003735 ... P60494 21378964
    284894 4v5r:B2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 21378964
    284895 4v5r:B3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 21378964
    284896 4v5r:B3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 21378964
    284897 4v5r:B4 (3.1) BS01 ZN ? GO:0003735 ... Q5SJE1 21378964
    284898 4v5r:B5 (3.1) BS01 rna ? GO:0003735 ... P80339 21378964
    284899 4v5r:B6 (3.1) BS01 rna ? GO:0000049 ... P35871 21378964
    284900 4v5r:B7 (3.1) BS01 rna ? GO:0003735 ... P80340 21378964
    284901 4v5r:B8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 21378964
    284902 4v5r:B9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 21378964
    284903 4v5r:B9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 21378964
    284904 4v5r:BC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 21378964
    284905 4v5r:BC (3.1) BS02 rna ? GO:0000049 ... Q5SLP7 21378964
    284906 4v5r:BD (3.1) BS01 rna ? GO:0002181 ... P60405 21378964
    284907 4v5r:BD (3.1) BS02 rna ? GO:0002181 ... P60405 21378964
    284908 4v5r:BE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 21378964
    284909 4v5r:BF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 21378964
    284910 4v5r:BG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 21378964
    284911 4v5r:BG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 21378964
    284912 4v5r:BG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 21378964
    284913 4v5r:BH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284914 4v5r:BJ (3.1) BS01 rna N/A N/A N/A 21378964
    284915 4v5r:BK (3.1) BS01 rna N/A N/A N/A 21378964
    284916 4v5r:BN (3.1) BS01 rna ? GO:0003729 ... P60488 21378964
    284917 4v5r:BO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 21378964
    284918 4v5r:BO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 21378964
    284919 4v5r:BP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 21378964
    284920 4v5r:BQ (3.1) BS01 rna ? GO:0000049 ... P60489 21378964
    284921 4v5r:BQ (3.1) BS02 rna ? GO:0000049 ... P60489 21378964
    284922 4v5r:BR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 21378964
    284923 4v5r:BS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 21378964
    284924 4v5r:BS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 21378964
    284925 4v5r:BT (3.1) BS01 rna ? GO:0003735 ... P60490 21378964
    284926 4v5r:BT (3.1) BS02 rna ? GO:0003735 ... P60490 21378964
    284927 4v5r:BU (3.1) BS01 rna ? GO:0000027 ... P60491 21378964
    284928 4v5r:BV (3.1) BS01 rna ? GO:0003723 ... P60492 21378964
    284929 4v5r:BW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 21378964
    284930 4v5r:BX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 21378964
    284931 4v5r:BY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 21378964
    284932 4v5r:BZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 21378964
    284933 4v5r:BZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 21378964
    284934 4v5r:CB (3.1) BS01 rna ? GO:0003735 ... P80371 21378964
    284935 4v5r:CC (3.1) BS01 rna ? GO:0003676 ... P80372 21378964
    284936 4v5r:CD (3.1) BS01 rna ? GO:0003723 ... P80373 21378964
    284937 4v5r:CD (3.1) BS02 ZN ? GO:0003723 ... P80373 21378964
    284938 4v5r:CE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 21378964
    284939 4v5r:CF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 21378964
    284940 4v5r:CG (3.1) BS01 rna ? GO:0000049 ... P17291 21378964
    284941 4v5r:CG (3.1) BS02 rna ? GO:0000049 ... P17291 21378964
    284942 4v5r:CH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284943 4v5r:CI (3.1) BS01 rna ? GO:0000049 ... P80374 21378964
    284944 4v5r:CJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 21378964
    284945 4v5r:CK (3.1) BS01 rna ? GO:0003735 ... P80376 21378964
    284946 4v5r:CL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 21378964
    284947 4v5r:CM (3.1) BS01 rna ? GO:0000049 ... P80377 21378964
    284948 4v5r:CM (3.1) BS02 rna ? GO:0000049 ... P80377 21378964
    284949 4v5r:CM (3.1) BS03 rna ? GO:0000049 ... P80377 21378964
    284950 4v5r:CN (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284951 4v5r:CN (3.1) BS02 ZN N/A GO:0003735 ... N/A 21378964
    284952 4v5r:CO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 21378964
    284953 4v5r:CO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 21378964
    284954 4v5r:CP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 21378964
    284955 4v5r:CQ (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284956 4v5r:CR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 21378964
    284957 4v5r:CS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 21378964
    284958 4v5r:CT (3.1) BS01 rna ? GO:0003723 ... P80380 21378964
    284959 4v5r:CZ (3.1) BS01 rna ? GO:0003723 ... Q5SHN6 21378964
    284960 4v5r:CZ (3.1) BS02 rna ? GO:0003723 ... Q5SHN6 21378964
    284961 4v5r:CZ (3.1) BS03 GDP ? GO:0003723 ... Q5SHN6 21378964
    284962 4v5r:CZ (3.1) BS04 KIR ? GO:0003723 ... Q5SHN6 21378964
    284963 4v5r:D0 (3.1) BS01 rna ? GO:0003735 ... P60493 21378964
    284964 4v5r:D0 (3.1) BS02 rna ? GO:0003735 ... P60493 21378964
    284965 4v5r:D0 (3.1) BS03 rna ? GO:0003735 ... P60493 21378964
    284966 4v5r:D1 (3.1) BS01 rna ? GO:0003735 ... P60494 21378964
    284967 4v5r:D2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 21378964
    284968 4v5r:D3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 21378964
    284969 4v5r:D3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 21378964
    284970 4v5r:D4 (3.1) BS01 ZN ? GO:0003735 ... Q5SJE1 21378964
    284971 4v5r:D5 (3.1) BS01 rna ? GO:0003735 ... P80339 21378964
    284972 4v5r:D6 (3.1) BS01 rna ? GO:0000049 ... P35871 21378964
    284973 4v5r:D7 (3.1) BS01 rna ? GO:0003735 ... P80340 21378964
    284974 4v5r:D8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 21378964
    284975 4v5r:D9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 21378964
    284976 4v5r:D9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 21378964
    284977 4v5r:DC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 21378964
    284978 4v5r:DD (3.1) BS01 rna ? GO:0002181 ... P60405 21378964
    284979 4v5r:DD (3.1) BS02 rna ? GO:0002181 ... P60405 21378964
    284980 4v5r:DE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 21378964
    284981 4v5r:DF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 21378964
    284982 4v5r:DG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 21378964
    284983 4v5r:DG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 21378964
    284984 4v5r:DG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 21378964
    284985 4v5r:DH (3.1) BS01 rna N/A GO:0003735 ... N/A 21378964
    284986 4v5r:DJ (3.1) BS01 rna N/A N/A N/A 21378964
    284987 4v5r:DK (3.1) BS01 rna N/A N/A N/A 21378964
    284988 4v5r:DN (3.1) BS01 rna ? GO:0003729 ... P60488 21378964
    284989 4v5r:DO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 21378964
    284990 4v5r:DO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 21378964
    284991 4v5r:DP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 21378964
    284992 4v5r:DQ (3.1) BS01 rna ? GO:0000049 ... P60489 21378964
    284993 4v5r:DQ (3.1) BS02 rna ? GO:0000049 ... P60489 21378964
    284994 4v5r:DR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 21378964
    284995 4v5r:DS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 21378964
    284996 4v5r:DS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 21378964
    284997 4v5r:DT (3.1) BS01 rna ? GO:0003735 ... P60490 21378964
    284998 4v5r:DT (3.1) BS02 rna ? GO:0003735 ... P60490 21378964
    284999 4v5r:DU (3.1) BS01 rna ? GO:0000027 ... P60491 21378964
    285000 4v5r:DV (3.1) BS01 rna ? GO:0003723 ... P60492 21378964

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).