SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    286201 4v69:AN (6.7) BS01 rna ? GO:0000028 ... P0AG59 19122150
    286202 4v69:AO (6.7) BS01 rna ? GO:0003735 ... Q8X9M2 19122150
    286203 4v69:AO (6.7) BS02 rna ? GO:0003735 ... Q8X9M2 19122150
    286204 4v69:AP (6.7) BS01 rna ? GO:0000028 ... P0A7T3 19122150
    286205 4v69:AQ (6.7) BS01 rna ? GO:0000028 ... P0AG63 19122150
    286206 4v69:AR (6.7) BS01 rna ? GO:0003735 ... P0A7T7 19122150
    286207 4v69:AS (6.7) BS01 rna ? GO:0003723 ... P0A7U3 19122150
    286208 4v69:AT (6.7) BS01 rna ? GO:0000028 ... P0A7U7 19122150
    286209 4v69:AU (6.7) BS01 rna ? GO:0003735 ... P68679 19122150
    286210 4v69:AZ (6.7) BS01 rna N/A GO:0003746 ... N/A 19122150
    286211 4v69:AZ (6.7) BS02 rna N/A GO:0003746 ... N/A 19122150
    286212 4v69:AZ (6.7) BS03 GDP N/A GO:0003746 ... N/A 19122150
    286213 4v69:B0 (6.7) BS01 rna ? GO:0000027 ... P0A7N4 19122150
    286214 4v69:B1 (6.7) BS01 rna ? GO:0000027 ... P0A7N9 19122150
    286215 4v69:B2 (6.7) BS01 rna ? GO:0002181 ... P0A7P5 19122150
    286216 4v69:B3 (6.7) BS01 rna ? GO:0002181 ... P0A7Q1 19122150
    286217 4v69:B4 (6.7) BS01 rna ? GO:0002181 ... P0A7Q6 19122150
    286218 4v69:B5 (6.7) BS01 rna ? GO:0000027 ... P0A7L0 19122150
    286219 4v69:B5 (6.7) BS02 rna ? GO:0000027 ... P0A7L0 19122150
    286220 4v69:BC (6.7) BS01 rna ? GO:0000027 ... P60422 19122150
    286221 4v69:BC (6.7) BS02 rna ? GO:0000027 ... P60422 19122150
    286222 4v69:BD (6.7) BS01 rna ? GO:0000027 ... P60438 19122150
    286223 4v69:BE (6.7) BS01 rna ? GO:0001070 ... P60723 19122150
    286224 4v69:BF (6.7) BS01 rna ? GO:0000027 ... P62399 19122150
    286225 4v69:BF (6.7) BS02 rna ? GO:0000027 ... P62399 19122150
    286226 4v69:BF (6.7) BS03 rna ? GO:0000027 ... P62399 19122150
    286227 4v69:BG (6.7) BS01 rna ? GO:0000027 ... P0AG55 19122150
    286228 4v69:BH (6.7) BS01 rna ? GO:0002181 ... P0A7R1 19122150
    286229 4v69:BI (6.7) BS01 rna ? GO:0000027 ... P0A7J7 19122150
    286230 4v69:BJ (6.7) BS01 rna ? GO:0002181 ... P0AA10 19122150
    286231 4v69:BK (6.7) BS01 rna ? GO:0002181 ... P0ADY3 19122150
    286232 4v69:BK (6.7) BS02 rna ? GO:0002181 ... P0ADY3 19122150
    286233 4v69:BL (6.7) BS01 rna ? GO:0002181 ... P02413 19122150
    286234 4v69:BM (6.7) BS01 rna ? GO:0000027 ... P0ADY7 19122150
    286235 4v69:BM (6.7) BS02 rna ? GO:0000027 ... P0ADY7 19122150
    286236 4v69:BN (6.7) BS01 rna ? GO:0000027 ... P0AG44 19122150
    286237 4v69:BO (6.7) BS01 rna ? GO:0002181 ... P0C018 19122150
    286238 4v69:BO (6.7) BS02 rna ? GO:0002181 ... P0C018 19122150
    286239 4v69:BP (6.7) BS01 rna ? GO:0000027 ... P0A7K6 19122150
    286240 4v69:BP (6.7) BS02 rna ? GO:0000027 ... P0A7K6 19122150
    286241 4v69:BQ (6.7) BS01 rna ? GO:0000027 ... P0A7L3 19122150
    286242 4v69:BR (6.7) BS01 rna ? GO:0002181 ... P0AG48 19122150
    286243 4v69:BS (6.7) BS01 rna ? GO:0002181 ... P61175 19122150
    286244 4v69:BT (6.7) BS01 rna ? GO:0000027 ... P0ADZ0 19122150
    286245 4v69:BU (6.7) BS01 rna ? GO:0000027 ... P60624 19122150
    286246 4v69:BV (6.7) BS01 rna ? GO:0000027 ... P68919 19122150
    286247 4v69:BV (6.7) BS02 rna ? GO:0000027 ... P68919 19122150
    286248 4v69:BW (6.7) BS01 rna ? GO:0000027 ... P0A7L8 19122150
    286249 4v69:BW (6.7) BS02 rna ? GO:0000027 ... P0A7L8 19122150
    286250 4v69:BX (6.7) BS01 rna ? GO:0000027 ... P0A7M2 19122150
    286251 4v69:BY (6.7) BS01 rna ? GO:0000027 ... P0A7M6 19122150
    286252 4v69:BZ (6.7) BS01 rna ? GO:0000027 ... P0AG51 19122150
    286253 4v69:BZ (6.7) BS02 rna ? GO:0000027 ... P0AG51 19122150
    286254 4v6a:AB (3.1) BS01 rna ? GO:0003735 ... P80371 19696344
    286255 4v6a:AC (3.1) BS01 rna ? GO:0003676 ... P80372 19696344
    286256 4v6a:AD (3.1) BS01 rna ? GO:0003723 ... P80373 19696344
    286257 4v6a:AE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 19696344
    286258 4v6a:AF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 19696344
    286259 4v6a:AG (3.1) BS01 rna ? GO:0000049 ... P17291 19696344
    286260 4v6a:AH (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286261 4v6a:AI (3.1) BS01 rna ? GO:0000049 ... P80374 19696344
    286262 4v6a:AJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 19696344
    286263 4v6a:AK (3.1) BS01 rna ? GO:0003735 ... P80376 19696344
    286264 4v6a:AL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 19696344
    286265 4v6a:AM (3.1) BS01 rna ? GO:0000049 ... P80377 19696344
    286266 4v6a:AM (3.1) BS02 rna ? GO:0000049 ... P80377 19696344
    286267 4v6a:AM (3.1) BS03 rna ? GO:0000049 ... P80377 19696344
    286268 4v6a:AN (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286269 4v6a:AO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 19696344
    286270 4v6a:AO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 19696344
    286271 4v6a:AP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 19696344
    286272 4v6a:AQ (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286273 4v6a:AR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 19696344
    286274 4v6a:AS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 19696344
    286275 4v6a:AT (3.1) BS01 rna ? GO:0003723 ... P80380 19696344
    286276 4v6a:AV (3.1) BS01 rna ? GO:0003746 ... Q76G20 19696344
    286277 4v6a:AV (3.1) BS02 rna ? GO:0003746 ... Q76G20 19696344
    286278 4v6a:AV (3.1) BS03 rna ? GO:0003746 ... Q76G20 19696344
    286279 4v6a:B0 (3.1) BS01 rna ? GO:0003735 ... P60493 19696344
    286280 4v6a:B0 (3.1) BS02 rna ? GO:0003735 ... P60493 19696344
    286281 4v6a:B1 (3.1) BS01 rna ? GO:0003735 ... P60494 19696344
    286282 4v6a:B2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 19696344
    286283 4v6a:B3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 19696344
    286284 4v6a:B3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 19696344
    286285 4v6a:B5 (3.1) BS01 rna ? GO:0003735 ... P80339 19696344
    286286 4v6a:B6 (3.1) BS01 rna ? GO:0000049 ... P35871 19696344
    286287 4v6a:B7 (3.1) BS01 rna ? GO:0003735 ... P80340 19696344
    286288 4v6a:B8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 19696344
    286289 4v6a:B9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 19696344
    286290 4v6a:B9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 19696344
    286291 4v6a:BC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 19696344
    286292 4v6a:BD (3.1) BS01 rna ? GO:0002181 ... P60405 19696344
    286293 4v6a:BD (3.1) BS02 MG ? GO:0002181 ... P60405 19696344
    286294 4v6a:BE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 19696344
    286295 4v6a:BF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 19696344
    286296 4v6a:BG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 19696344
    286297 4v6a:BG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 19696344
    286298 4v6a:BG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 19696344
    286299 4v6a:BH (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286300 4v6a:BI (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 19696344
    286301 4v6a:BN (3.1) BS01 rna ? GO:0003729 ... P60488 19696344
    286302 4v6a:BO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 19696344
    286303 4v6a:BO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 19696344
    286304 4v6a:BP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 19696344
    286305 4v6a:BQ (3.1) BS01 rna ? GO:0000049 ... P60489 19696344
    286306 4v6a:BQ (3.1) BS02 rna ? GO:0000049 ... P60489 19696344
    286307 4v6a:BR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 19696344
    286308 4v6a:BS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 19696344
    286309 4v6a:BS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 19696344
    286310 4v6a:BT (3.1) BS01 rna ? GO:0003735 ... P60490 19696344
    286311 4v6a:BT (3.1) BS02 rna ? GO:0003735 ... P60490 19696344
    286312 4v6a:BT (3.1) BS03 MG ? GO:0003735 ... P60490 19696344
    286313 4v6a:BU (3.1) BS01 rna ? GO:0000027 ... P60491 19696344
    286314 4v6a:BU (3.1) BS02 MG ? GO:0000027 ... P60491 19696344
    286315 4v6a:BV (3.1) BS01 rna ? GO:0003723 ... P60492 19696344
    286316 4v6a:BW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 19696344
    286317 4v6a:BX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 19696344
    286318 4v6a:BY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 19696344
    286319 4v6a:BZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 19696344
    286320 4v6a:BZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 19696344
    286321 4v6a:CB (3.1) BS01 rna ? GO:0003735 ... P80371 19696344
    286322 4v6a:CC (3.1) BS01 rna ? GO:0003676 ... P80372 19696344
    286323 4v6a:CD (3.1) BS01 rna ? GO:0003723 ... P80373 19696344
    286324 4v6a:CE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 19696344
    286325 4v6a:CF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 19696344
    286326 4v6a:CG (3.1) BS01 rna ? GO:0000049 ... P17291 19696344
    286327 4v6a:CH (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286328 4v6a:CI (3.1) BS01 rna ? GO:0000049 ... P80374 19696344
    286329 4v6a:CI (3.1) BS02 rna ? GO:0000049 ... P80374 19696344
    286330 4v6a:CJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 19696344
    286331 4v6a:CK (3.1) BS01 rna ? GO:0003735 ... P80376 19696344
    286332 4v6a:CL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 19696344
    286333 4v6a:CM (3.1) BS01 rna ? GO:0000049 ... P80377 19696344
    286334 4v6a:CM (3.1) BS02 rna ? GO:0000049 ... P80377 19696344
    286335 4v6a:CM (3.1) BS03 rna ? GO:0000049 ... P80377 19696344
    286336 4v6a:CN (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286337 4v6a:CO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 19696344
    286338 4v6a:CO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 19696344
    286339 4v6a:CP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 19696344
    286340 4v6a:CQ (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286341 4v6a:CR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 19696344
    286342 4v6a:CS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 19696344
    286343 4v6a:CT (3.1) BS01 rna ? GO:0003723 ... P80380 19696344
    286344 4v6a:CV (3.1) BS01 rna ? GO:0003746 ... Q76G20 19696344
    286345 4v6a:CV (3.1) BS02 rna ? GO:0003746 ... Q76G20 19696344
    286346 4v6a:CV (3.1) BS03 rna ? GO:0003746 ... Q76G20 19696344
    286347 4v6a:D0 (3.1) BS01 rna ? GO:0003735 ... P60493 19696344
    286348 4v6a:D0 (3.1) BS02 rna ? GO:0003735 ... P60493 19696344
    286349 4v6a:D0 (3.1) BS03 rna ? GO:0003735 ... P60493 19696344
    286350 4v6a:D1 (3.1) BS01 rna ? GO:0003735 ... P60494 19696344
    286351 4v6a:D2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 19696344
    286352 4v6a:D3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 19696344
    286353 4v6a:D3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 19696344
    286354 4v6a:D5 (3.1) BS01 rna ? GO:0003735 ... P80339 19696344
    286355 4v6a:D5 (3.1) BS02 ZN ? GO:0003735 ... P80339 19696344
    286356 4v6a:D6 (3.1) BS01 rna ? GO:0000049 ... P35871 19696344
    286357 4v6a:D6 (3.1) BS02 MG ? GO:0000049 ... P35871 19696344
    286358 4v6a:D7 (3.1) BS01 rna ? GO:0003735 ... P80340 19696344
    286359 4v6a:D8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 19696344
    286360 4v6a:D9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 19696344
    286361 4v6a:D9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 19696344
    286362 4v6a:DC (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 19696344
    286363 4v6a:DD (3.1) BS01 rna ? GO:0002181 ... P60405 19696344
    286364 4v6a:DD (3.1) BS02 rna ? GO:0002181 ... P60405 19696344
    286365 4v6a:DD (3.1) BS03 MG ? GO:0002181 ... P60405 19696344
    286366 4v6a:DD (3.1) BS04 MG ? GO:0002181 ... P60405 19696344
    286367 4v6a:DE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 19696344
    286368 4v6a:DF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 19696344
    286369 4v6a:DF (3.1) BS02 MG ? GO:0003735 ... Q5SHN9 19696344
    286370 4v6a:DG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 19696344
    286371 4v6a:DG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 19696344
    286372 4v6a:DG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 19696344
    286373 4v6a:DH (3.1) BS01 rna N/A GO:0003735 ... N/A 19696344
    286374 4v6a:DI (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 19696344
    286375 4v6a:DN (3.1) BS01 rna ? GO:0003729 ... P60488 19696344
    286376 4v6a:DO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 19696344
    286377 4v6a:DO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 19696344
    286378 4v6a:DP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 19696344
    286379 4v6a:DQ (3.1) BS01 rna ? GO:0000049 ... P60489 19696344
    286380 4v6a:DQ (3.1) BS02 rna ? GO:0000049 ... P60489 19696344
    286381 4v6a:DR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 19696344
    286382 4v6a:DS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 19696344
    286383 4v6a:DS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 19696344
    286384 4v6a:DT (3.1) BS01 rna ? GO:0003735 ... P60490 19696344
    286385 4v6a:DT (3.1) BS02 rna ? GO:0003735 ... P60490 19696344
    286386 4v6a:DU (3.1) BS01 rna ? GO:0000027 ... P60491 19696344
    286387 4v6a:DV (3.1) BS01 rna ? GO:0003723 ... P60492 19696344
    286388 4v6a:DW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 19696344
    286389 4v6a:DX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 19696344
    286390 4v6a:DY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 19696344
    286391 4v6a:DZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 19696344
    286392 4v6a:DZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 19696344
    286393 4v6b:AA (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286394 4v6b:AO (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286395 4v6b:Ax (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286396 4v6b:BH (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286397 4v6b:BI (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286398 4v6b:BW (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286399 4v6b:Bf (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286400 4v6b:Bv (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).