SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    286401 4v6b:Cj (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286402 4v6b:Cm (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286403 4v6b:Cp (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286404 4v6b:Cq (2.85) BS01 CA ? GO:0006826 ... Q6S4P3 19923220
    286405 4v6c:AB (3.19) BS01 rna ? GO:0000028 ... P0A7V0 19696352
    286406 4v6c:AC (3.19) BS01 rna ? GO:0000028 ... P0A7V3 19696352
    286407 4v6c:AD (3.19) BS01 rna ? GO:0000028 ... P0A7V8 19696352
    286408 4v6c:AE (3.19) BS01 rna ? GO:0000028 ... P0A7W1 19696352
    286409 4v6c:AF (3.19) BS01 rna ? GO:0002181 ... P02358 19696352
    286410 4v6c:AG (3.19) BS01 rna ? GO:0000028 ... P02359 19696352
    286411 4v6c:AH (3.19) BS01 rna ? GO:0000028 ... P0A7W7 19696352
    286412 4v6c:AI (3.19) BS01 rna ? GO:0000049 ... P0A7X3 19696352
    286413 4v6c:AJ (3.19) BS01 rna ? GO:0000049 ... P0A7R5 19696352
    286414 4v6c:AK (3.19) BS01 rna ? GO:0002181 ... P0A7R9 19696352
    286415 4v6c:AK (3.19) BS02 rna ? GO:0002181 ... P0A7R9 19696352
    286416 4v6c:AL (3.19) BS01 rna ? GO:0000049 ... P0A7S3 19696352
    286417 4v6c:AM (3.19) BS01 rna ? GO:0000049 ... P0A7S9 19696352
    286418 4v6c:AN (3.19) BS01 rna ? GO:0000028 ... P0AG59 19696352
    286419 4v6c:AO (3.19) BS01 rna ? GO:0000028 ... P0ADZ4 19696352
    286420 4v6c:AO (3.19) BS02 rna ? GO:0000028 ... P0ADZ4 19696352
    286421 4v6c:AP (3.19) BS01 rna ? GO:0000028 ... P0A7T3 19696352
    286422 4v6c:AQ (3.19) BS01 rna ? GO:0000028 ... P0AG63 19696352
    286423 4v6c:AR (3.19) BS01 rna ? GO:0002181 ... P0A7T7 19696352
    286424 4v6c:AS (3.19) BS01 rna ? GO:0000028 ... P0A7U3 19696352
    286425 4v6c:AT (3.19) BS01 rna ? GO:0000028 ... P0A7U7 19696352
    286426 4v6c:AU (3.19) BS01 rna ? GO:0000028 ... P68679 19696352
    286427 4v6c:B0 (3.19) BS01 rna ? GO:0000027 ... P0A7N4 19696352
    286428 4v6c:B1 (3.19) BS01 rna ? GO:0000027 ... P0A7N9 19696352
    286429 4v6c:B2 (3.19) BS01 rna ? GO:0002181 ... P0A7P5 19696352
    286430 4v6c:B3 (3.19) BS01 rna ? GO:0002181 ... P0A7Q1 19696352
    286431 4v6c:B4 (3.19) BS01 rna ? GO:0002181 ... P0A7Q6 19696352
    286432 4v6c:B4 (3.19) BS02 ZN ? GO:0002181 ... P0A7Q6 19696352
    286433 4v6c:BC (3.19) BS01 rna ? GO:0000027 ... P60422 19696352
    286434 4v6c:BD (3.19) BS01 rna ? GO:0000027 ... P60438 19696352
    286435 4v6c:BE (3.19) BS01 rna ? GO:0001070 ... P60723 19696352
    286436 4v6c:BF (3.19) BS01 rna ? GO:0000027 ... P62399 19696352
    286437 4v6c:BF (3.19) BS02 rna ? GO:0000027 ... P62399 19696352
    286438 4v6c:BG (3.19) BS01 rna ? GO:0000027 ... P0AG55 19696352
    286439 4v6c:BH (3.19) BS01 rna ? GO:0002181 ... P0A7R1 19696352
    286440 4v6c:BI (3.19) BS01 rna ? GO:0000027 ... P0A7J7 19696352
    286441 4v6c:BJ (3.19) BS01 rna ? GO:0002181 ... P0AA10 19696352
    286442 4v6c:BK (3.19) BS01 rna ? GO:0002181 ... P0ADY3 19696352
    286443 4v6c:BK (3.19) BS02 rna ? GO:0002181 ... P0ADY3 19696352
    286444 4v6c:BL (3.19) BS01 rna ? GO:0002181 ... P02413 19696352
    286445 4v6c:BM (3.19) BS01 rna ? GO:0000027 ... P0ADY7 19696352
    286446 4v6c:BM (3.19) BS02 rna ? GO:0000027 ... P0ADY7 19696352
    286447 4v6c:BN (3.19) BS01 rna ? GO:0000027 ... P0AG44 19696352
    286448 4v6c:BO (3.19) BS01 rna ? GO:0002181 ... P0C018 19696352
    286449 4v6c:BO (3.19) BS02 rna ? GO:0002181 ... P0C018 19696352
    286450 4v6c:BP (3.19) BS01 rna ? GO:0000027 ... P0A7K6 19696352
    286451 4v6c:BP (3.19) BS02 rna ? GO:0000027 ... P0A7K6 19696352
    286452 4v6c:BQ (3.19) BS01 rna ? GO:0000027 ... P0A7L3 19696352
    286453 4v6c:BR (3.19) BS01 rna ? GO:0002181 ... P0AG48 19696352
    286454 4v6c:BS (3.19) BS01 rna ? GO:0002181 ... P61175 19696352
    286455 4v6c:BT (3.19) BS01 rna ? GO:0000027 ... P0ADZ0 19696352
    286456 4v6c:BU (3.19) BS01 rna ? GO:0000027 ... P60624 19696352
    286457 4v6c:BV (3.19) BS01 rna ? GO:0000027 ... P68919 19696352
    286458 4v6c:BV (3.19) BS02 rna ? GO:0000027 ... P68919 19696352
    286459 4v6c:BW (3.19) BS01 rna ? GO:0000027 ... P0A7L8 19696352
    286460 4v6c:BX (3.19) BS01 rna ? GO:0000027 ... P0A7M2 19696352
    286461 4v6c:BY (3.19) BS01 rna ? GO:0000027 ... P0A7M6 19696352
    286462 4v6c:BZ (3.19) BS01 rna ? GO:0000027 ... P0AG51 19696352
    286463 4v6c:CB (3.19) BS01 rna ? GO:0000028 ... P0A7V0 19696352
    286464 4v6c:CB (3.19) BS02 rna ? GO:0000028 ... P0A7V0 19696352
    286465 4v6c:CC (3.19) BS01 rna ? GO:0000028 ... P0A7V3 19696352
    286466 4v6c:CD (3.19) BS01 rna ? GO:0000028 ... P0A7V8 19696352
    286467 4v6c:CE (3.19) BS01 rna ? GO:0000028 ... P0A7W1 19696352
    286468 4v6c:CF (3.19) BS01 rna ? GO:0002181 ... P02358 19696352
    286469 4v6c:CG (3.19) BS01 rna ? GO:0000028 ... P02359 19696352
    286470 4v6c:CH (3.19) BS01 rna ? GO:0000028 ... P0A7W7 19696352
    286471 4v6c:CI (3.19) BS01 rna ? GO:0000049 ... P0A7X3 19696352
    286472 4v6c:CJ (3.19) BS01 rna ? GO:0000049 ... P0A7R5 19696352
    286473 4v6c:CK (3.19) BS01 rna ? GO:0002181 ... P0A7R9 19696352
    286474 4v6c:CL (3.19) BS01 rna ? GO:0000049 ... P0A7S3 19696352
    286475 4v6c:CM (3.19) BS01 rna ? GO:0000049 ... P0A7S9 19696352
    286476 4v6c:CN (3.19) BS01 rna ? GO:0000028 ... P0AG59 19696352
    286477 4v6c:CO (3.19) BS01 rna ? GO:0000028 ... P0ADZ4 19696352
    286478 4v6c:CO (3.19) BS02 rna ? GO:0000028 ... P0ADZ4 19696352
    286479 4v6c:CP (3.19) BS01 rna ? GO:0000028 ... P0A7T3 19696352
    286480 4v6c:CQ (3.19) BS01 rna ? GO:0000028 ... P0AG63 19696352
    286481 4v6c:CR (3.19) BS01 rna ? GO:0002181 ... P0A7T7 19696352
    286482 4v6c:CS (3.19) BS01 rna ? GO:0000028 ... P0A7U3 19696352
    286483 4v6c:CT (3.19) BS01 rna ? GO:0000028 ... P0A7U7 19696352
    286484 4v6c:CU (3.19) BS01 rna ? GO:0000028 ... P68679 19696352
    286485 4v6c:D0 (3.19) BS01 rna ? GO:0000027 ... P0A7N4 19696352
    286486 4v6c:D1 (3.19) BS01 rna ? GO:0000027 ... P0A7N9 19696352
    286487 4v6c:D2 (3.19) BS01 rna ? GO:0002181 ... P0A7P5 19696352
    286488 4v6c:D3 (3.19) BS01 rna ? GO:0002181 ... P0A7Q1 19696352
    286489 4v6c:D4 (3.19) BS01 rna ? GO:0002181 ... P0A7Q6 19696352
    286490 4v6c:D4 (3.19) BS02 ZN ? GO:0002181 ... P0A7Q6 19696352
    286491 4v6c:DC (3.19) BS01 rna ? GO:0000027 ... P60422 19696352
    286492 4v6c:DD (3.19) BS01 rna ? GO:0000027 ... P60438 19696352
    286493 4v6c:DE (3.19) BS01 rna ? GO:0001070 ... P60723 19696352
    286494 4v6c:DF (3.19) BS01 rna ? GO:0000027 ... P62399 19696352
    286495 4v6c:DF (3.19) BS02 rna ? GO:0000027 ... P62399 19696352
    286496 4v6c:DG (3.19) BS01 rna ? GO:0000027 ... P0AG55 19696352
    286497 4v6c:DH (3.19) BS01 rna ? GO:0002181 ... P0A7R1 19696352
    286498 4v6c:DI (3.19) BS01 rna ? GO:0000027 ... P0A7J7 19696352
    286499 4v6c:DJ (3.19) BS01 rna ? GO:0002181 ... P0AA10 19696352
    286500 4v6c:DK (3.19) BS01 rna ? GO:0002181 ... P0ADY3 19696352
    286501 4v6c:DK (3.19) BS02 rna ? GO:0002181 ... P0ADY3 19696352
    286502 4v6c:DL (3.19) BS01 rna ? GO:0002181 ... P02413 19696352
    286503 4v6c:DM (3.19) BS01 rna ? GO:0000027 ... P0ADY7 19696352
    286504 4v6c:DM (3.19) BS02 rna ? GO:0000027 ... P0ADY7 19696352
    286505 4v6c:DN (3.19) BS01 rna ? GO:0000027 ... P0AG44 19696352
    286506 4v6c:DO (3.19) BS01 rna ? GO:0002181 ... P0C018 19696352
    286507 4v6c:DO (3.19) BS02 rna ? GO:0002181 ... P0C018 19696352
    286508 4v6c:DP (3.19) BS01 rna ? GO:0000027 ... P0A7K6 19696352
    286509 4v6c:DP (3.19) BS02 rna ? GO:0000027 ... P0A7K6 19696352
    286510 4v6c:DQ (3.19) BS01 rna ? GO:0000027 ... P0A7L3 19696352
    286511 4v6c:DR (3.19) BS01 rna ? GO:0002181 ... P0AG48 19696352
    286512 4v6c:DS (3.19) BS01 rna ? GO:0002181 ... P61175 19696352
    286513 4v6c:DT (3.19) BS01 rna ? GO:0000027 ... P0ADZ0 19696352
    286514 4v6c:DU (3.19) BS01 rna ? GO:0000027 ... P60624 19696352
    286515 4v6c:DV (3.19) BS01 rna ? GO:0000027 ... P68919 19696352
    286516 4v6c:DV (3.19) BS02 rna ? GO:0000027 ... P68919 19696352
    286517 4v6c:DW (3.19) BS01 rna ? GO:0000027 ... P0A7L8 19696352
    286518 4v6c:DW (3.19) BS02 rna ? GO:0000027 ... P0A7L8 19696352
    286519 4v6c:DX (3.19) BS01 rna ? GO:0000027 ... P0A7M2 19696352
    286520 4v6c:DY (3.19) BS01 rna ? GO:0000027 ... P0A7M6 19696352
    286521 4v6c:DZ (3.19) BS01 rna ? GO:0000027 ... P0AG51 19696352
    286522 4v6c:DZ (3.19) BS02 rna ? GO:0000027 ... P0AG51 19696352
    286523 4v6d:AB (3.814) BS01 rna ? GO:0000028 ... P0A7V0 19696352
    286524 4v6d:AC (3.814) BS01 rna ? GO:0000028 ... P0A7V3 19696352
    286525 4v6d:AD (3.814) BS01 rna ? GO:0000028 ... P0A7V8 19696352
    286526 4v6d:AE (3.814) BS01 rna ? GO:0000028 ... P0A7W1 19696352
    286527 4v6d:AF (3.814) BS01 rna ? GO:0002181 ... P02358 19696352
    286528 4v6d:AG (3.814) BS01 rna ? GO:0000028 ... P02359 19696352
    286529 4v6d:AH (3.814) BS01 rna ? GO:0000028 ... P0A7W7 19696352
    286530 4v6d:AI (3.814) BS01 rna ? GO:0000049 ... P0A7X3 19696352
    286531 4v6d:AJ (3.814) BS01 rna ? GO:0000049 ... P0A7R5 19696352
    286532 4v6d:AK (3.814) BS01 rna ? GO:0002181 ... P0A7R9 19696352
    286533 4v6d:AK (3.814) BS02 rna ? GO:0002181 ... P0A7R9 19696352
    286534 4v6d:AL (3.814) BS01 rna ? GO:0000049 ... P0A7S3 19696352
    286535 4v6d:AM (3.814) BS01 rna ? GO:0000049 ... P0A7S9 19696352
    286536 4v6d:AN (3.814) BS01 rna ? GO:0000028 ... P0AG59 19696352
    286537 4v6d:AO (3.814) BS01 rna ? GO:0000028 ... P0ADZ4 19696352
    286538 4v6d:AO (3.814) BS02 rna ? GO:0000028 ... P0ADZ4 19696352
    286539 4v6d:AP (3.814) BS01 rna ? GO:0000028 ... P0A7T3 19696352
    286540 4v6d:AQ (3.814) BS01 rna ? GO:0000028 ... P0AG63 19696352
    286541 4v6d:AR (3.814) BS01 rna ? GO:0002181 ... P0A7T7 19696352
    286542 4v6d:AS (3.814) BS01 rna ? GO:0000028 ... P0A7U3 19696352
    286543 4v6d:AT (3.814) BS01 rna ? GO:0000028 ... P0A7U7 19696352
    286544 4v6d:AU (3.814) BS01 rna ? GO:0000028 ... P68679 19696352
    286545 4v6d:B0 (3.814) BS01 rna ? GO:0000027 ... P0A7N4 19696352
    286546 4v6d:B1 (3.814) BS01 rna ? GO:0000027 ... P0A7N9 19696352
    286547 4v6d:B2 (3.814) BS01 rna ? GO:0002181 ... P0A7P5 19696352
    286548 4v6d:B3 (3.814) BS01 rna ? GO:0002181 ... P0A7Q1 19696352
    286549 4v6d:B4 (3.814) BS01 rna ? GO:0002181 ... P0A7Q6 19696352
    286550 4v6d:B4 (3.814) BS02 ZN ? GO:0002181 ... P0A7Q6 19696352
    286551 4v6d:BC (3.814) BS01 rna ? GO:0000027 ... P60422 19696352
    286552 4v6d:BD (3.814) BS01 rna ? GO:0000027 ... P60438 19696352
    286553 4v6d:BE (3.814) BS01 rna ? GO:0001070 ... P60723 19696352
    286554 4v6d:BF (3.814) BS01 rna ? GO:0000027 ... P62399 19696352
    286555 4v6d:BF (3.814) BS02 rna ? GO:0000027 ... P62399 19696352
    286556 4v6d:BG (3.814) BS01 rna ? GO:0000027 ... P0AG55 19696352
    286557 4v6d:BH (3.814) BS01 rna ? GO:0002181 ... P0A7R1 19696352
    286558 4v6d:BI (3.814) BS01 rna ? GO:0000027 ... P0A7J7 19696352
    286559 4v6d:BJ (3.814) BS01 rna ? GO:0002181 ... P0AA10 19696352
    286560 4v6d:BK (3.814) BS01 rna ? GO:0002181 ... P0ADY3 19696352
    286561 4v6d:BK (3.814) BS02 rna ? GO:0002181 ... P0ADY3 19696352
    286562 4v6d:BL (3.814) BS01 rna ? GO:0002181 ... P02413 19696352
    286563 4v6d:BM (3.814) BS01 rna ? GO:0000027 ... P0ADY7 19696352
    286564 4v6d:BM (3.814) BS02 rna ? GO:0000027 ... P0ADY7 19696352
    286565 4v6d:BN (3.814) BS01 rna ? GO:0000027 ... P0AG44 19696352
    286566 4v6d:BO (3.814) BS01 rna ? GO:0002181 ... P0C018 19696352
    286567 4v6d:BO (3.814) BS02 rna ? GO:0002181 ... P0C018 19696352
    286568 4v6d:BP (3.814) BS01 rna ? GO:0000027 ... P0A7K6 19696352
    286569 4v6d:BP (3.814) BS02 rna ? GO:0000027 ... P0A7K6 19696352
    286570 4v6d:BQ (3.814) BS01 rna ? GO:0000027 ... P0A7L3 19696352
    286571 4v6d:BR (3.814) BS01 rna ? GO:0002181 ... P0AG48 19696352
    286572 4v6d:BS (3.814) BS01 rna ? GO:0002181 ... P61175 19696352
    286573 4v6d:BT (3.814) BS01 rna ? GO:0000027 ... P0ADZ0 19696352
    286574 4v6d:BU (3.814) BS01 rna ? GO:0000027 ... P60624 19696352
    286575 4v6d:BV (3.814) BS01 rna ? GO:0000027 ... P68919 19696352
    286576 4v6d:BW (3.814) BS01 rna ? GO:0000027 ... P0A7L8 19696352
    286577 4v6d:BX (3.814) BS01 rna ? GO:0000027 ... P0A7M2 19696352
    286578 4v6d:BY (3.814) BS01 rna ? GO:0000027 ... P0A7M6 19696352
    286579 4v6d:BZ (3.814) BS01 rna ? GO:0000027 ... P0AG51 19696352
    286580 4v6d:CB (3.814) BS01 rna ? GO:0000028 ... P0A7V0 19696352
    286581 4v6d:CB (3.814) BS02 rna ? GO:0000028 ... P0A7V0 19696352
    286582 4v6d:CC (3.814) BS01 rna ? GO:0000028 ... P0A7V3 19696352
    286583 4v6d:CD (3.814) BS01 rna ? GO:0000028 ... P0A7V8 19696352
    286584 4v6d:CD (3.814) BS02 rna ? GO:0000028 ... P0A7V8 19696352
    286585 4v6d:CE (3.814) BS01 rna ? GO:0000028 ... P0A7W1 19696352
    286586 4v6d:CF (3.814) BS01 rna ? GO:0002181 ... P02358 19696352
    286587 4v6d:CG (3.814) BS01 rna ? GO:0000028 ... P02359 19696352
    286588 4v6d:CH (3.814) BS01 rna ? GO:0000028 ... P0A7W7 19696352
    286589 4v6d:CI (3.814) BS01 rna ? GO:0000049 ... P0A7X3 19696352
    286590 4v6d:CJ (3.814) BS01 rna ? GO:0000049 ... P0A7R5 19696352
    286591 4v6d:CK (3.814) BS01 rna ? GO:0002181 ... P0A7R9 19696352
    286592 4v6d:CL (3.814) BS01 rna ? GO:0000049 ... P0A7S3 19696352
    286593 4v6d:CM (3.814) BS01 rna ? GO:0000049 ... P0A7S9 19696352
    286594 4v6d:CN (3.814) BS01 rna ? GO:0000028 ... P0AG59 19696352
    286595 4v6d:CO (3.814) BS01 rna ? GO:0000028 ... P0ADZ4 19696352
    286596 4v6d:CO (3.814) BS02 rna ? GO:0000028 ... P0ADZ4 19696352
    286597 4v6d:CP (3.814) BS01 rna ? GO:0000028 ... P0A7T3 19696352
    286598 4v6d:CQ (3.814) BS01 rna ? GO:0000028 ... P0AG63 19696352
    286599 4v6d:CR (3.814) BS01 rna ? GO:0002181 ... P0A7T7 19696352
    286600 4v6d:CS (3.814) BS01 rna ? GO:0000028 ... P0A7U3 19696352

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).