SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    287001 4v6f:DD (3.1) BS03 MG ? GO:0002181 ... P60405 20400952
    287002 4v6f:DD (3.1) BS04 MG ? GO:0002181 ... P60405 20400952
    287003 4v6f:DD (3.1) BS05 MG ? GO:0002181 ... P60405 20400952
    287004 4v6f:DD (3.1) BS06 MG ? GO:0002181 ... P60405 20400952
    287005 4v6f:DD (3.1) BS07 MG ? GO:0002181 ... P60405 20400952
    287006 4v6f:DD (3.1) BS08 MG ? GO:0002181 ... P60405 20400952
    287007 4v6f:DD (3.1) BS09 MG ? GO:0002181 ... P60405 20400952
    287008 4v6f:DD (3.1) BS10 MG ? GO:0002181 ... P60405 20400952
    287009 4v6f:DD (3.1) BS11 MG ? GO:0002181 ... P60405 20400952
    287010 4v6f:DD (3.1) BS12 MG ? GO:0002181 ... P60405 20400952
    287011 4v6f:DE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 20400952
    287012 4v6f:DE (3.1) BS02 MG ? GO:0003735 ... Q5SHN8 20400952
    287013 4v6f:DE (3.1) BS03 MG ? GO:0003735 ... Q5SHN8 20400952
    287014 4v6f:DE (3.1) BS04 MG ? GO:0003735 ... Q5SHN8 20400952
    287015 4v6f:DE (3.1) BS05 MG ? GO:0003735 ... Q5SHN8 20400952
    287016 4v6f:DE (3.1) BS06 MG ? GO:0003735 ... Q5SHN8 20400952
    287017 4v6f:DE (3.1) BS07 MG ? GO:0003735 ... Q5SHN8 20400952
    287018 4v6f:DE (3.1) BS08 MG ? GO:0003735 ... Q5SHN8 20400952
    287019 4v6f:DE (3.1) BS09 MG ? GO:0003735 ... Q5SHN8 20400952
    287020 4v6f:DE (3.1) BS10 MG ? GO:0003735 ... Q5SHN8 20400952
    287021 4v6f:DE (3.1) BS11 MG ? GO:0003735 ... Q5SHN8 20400952
    287022 4v6f:DE (3.1) BS12 MG ? GO:0003735 ... Q5SHN8 20400952
    287023 4v6f:DF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 20400952
    287024 4v6f:DF (3.1) BS02 MG ? GO:0003735 ... Q5SHN9 20400952
    287025 4v6f:DF (3.1) BS03 MG ? GO:0003735 ... Q5SHN9 20400952
    287026 4v6f:DF (3.1) BS04 MG ? GO:0003735 ... Q5SHN9 20400952
    287027 4v6f:DF (3.1) BS05 MG ? GO:0003735 ... Q5SHN9 20400952
    287028 4v6f:DF (3.1) BS06 MG ? GO:0003735 ... Q5SHN9 20400952
    287029 4v6f:DF (3.1) BS07 MG ? GO:0003735 ... Q5SHN9 20400952
    287030 4v6f:DF (3.1) BS08 MG ? GO:0003735 ... Q5SHN9 20400952
    287031 4v6f:DF (3.1) BS09 MG ? GO:0003735 ... Q5SHN9 20400952
    287032 4v6f:DF (3.1) BS10 MG ? GO:0003735 ... Q5SHN9 20400952
    287033 4v6f:DF (3.1) BS11 MG ? GO:0003735 ... Q5SHN9 20400952
    287034 4v6f:DF (3.1) BS12 MG ? GO:0003735 ... Q5SHN9 20400952
    287035 4v6f:DF (3.1) BS13 MG ? GO:0003735 ... Q5SHN9 20400952
    287036 4v6f:DG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 20400952
    287037 4v6f:DG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 20400952
    287038 4v6f:DG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 20400952
    287039 4v6f:DG (3.1) BS04 MG ? GO:0000049 ... Q5SHQ0 20400952
    287040 4v6f:DG (3.1) BS05 MG ? GO:0000049 ... Q5SHQ0 20400952
    287041 4v6f:DH (3.1) BS01 rna ? GO:0002181 ... A0A0M9ADP1 20400952
    287042 4v6f:DH (3.1) BS02 MG ? GO:0002181 ... A0A0M9ADP1 20400952
    287043 4v6f:DH (3.1) BS03 MG ? GO:0002181 ... A0A0M9ADP1 20400952
    287044 4v6f:DK (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 20400952
    287045 4v6f:DK (3.1) BS02 MG ? GO:0003735 ... Q5SLQ1 20400952
    287046 4v6f:DK (3.1) BS03 MG ? GO:0003735 ... Q5SLQ1 20400952
    287047 4v6f:DL (3.1) BS01 rna ? GO:0003735 ... Q5SLP6 20400952
    287048 4v6f:DM (3.1) BS01 rna ? GO:0003729 ... P60488 20400952
    287049 4v6f:DM (3.1) BS02 MG ? GO:0003729 ... P60488 20400952
    287050 4v6f:DM (3.1) BS03 MG ? GO:0003729 ... P60488 20400952
    287051 4v6f:DM (3.1) BS04 MG ? GO:0003729 ... P60488 20400952
    287052 4v6f:DM (3.1) BS05 MG ? GO:0003729 ... P60488 20400952
    287053 4v6f:DN (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 20400952
    287054 4v6f:DN (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 20400952
    287055 4v6f:DO (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 20400952
    287056 4v6f:DO (3.1) BS02 MG ? GO:0003735 ... Q5SHQ7 20400952
    287057 4v6f:DO (3.1) BS03 MG ? GO:0003735 ... Q5SHQ7 20400952
    287058 4v6f:DO (3.1) BS04 MG ? GO:0003735 ... Q5SHQ7 20400952
    287059 4v6f:DO (3.1) BS05 MG ? GO:0003735 ... Q5SHQ7 20400952
    287060 4v6f:DO (3.1) BS06 MG ? GO:0003735 ... Q5SHQ7 20400952
    287061 4v6f:DO (3.1) BS07 MG ? GO:0003735 ... Q5SHQ7 20400952
    287062 4v6f:DO (3.1) BS08 MG ? GO:0003735 ... Q5SHQ7 20400952
    287063 4v6f:DO (3.1) BS09 MG ? GO:0003735 ... Q5SHQ7 20400952
    287064 4v6f:DO (3.1) BS10 MG ? GO:0003735 ... Q5SHQ7 20400952
    287065 4v6f:DP (3.1) BS01 rna ? GO:0000049 ... P60489 20400952
    287066 4v6f:DP (3.1) BS02 rna ? GO:0000049 ... P60489 20400952
    287067 4v6f:DP (3.1) BS03 rna ? GO:0000049 ... P60489 20400952
    287068 4v6f:DP (3.1) BS04 MG ? GO:0000049 ... P60489 20400952
    287069 4v6f:DP (3.1) BS05 MG ? GO:0000049 ... P60489 20400952
    287070 4v6f:DP (3.1) BS06 MG ? GO:0000049 ... P60489 20400952
    287071 4v6f:DP (3.1) BS07 MG ? GO:0000049 ... P60489 20400952
    287072 4v6f:DQ (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 20400952
    287073 4v6f:DQ (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 20400952
    287074 4v6f:DR (3.1) BS01 rna ? GO:0003735 ... P60490 20400952
    287075 4v6f:DR (3.1) BS02 rna ? GO:0003735 ... P60490 20400952
    287076 4v6f:DR (3.1) BS03 MG ? GO:0003735 ... P60490 20400952
    287077 4v6f:DR (3.1) BS04 MG ? GO:0003735 ... P60490 20400952
    287078 4v6f:DS (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 20400952
    287079 4v6f:DS (3.1) BS02 MG ? GO:0003735 ... Q5SHP3 20400952
    287080 4v6f:DS (3.1) BS03 MG ? GO:0003735 ... Q5SHP3 20400952
    287081 4v6f:DT (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 20400952
    287082 4v6f:DT (3.1) BS02 MG ? GO:0003735 ... Q5SHP0 20400952
    287083 4v6f:DT (3.1) BS03 MG ? GO:0003735 ... Q5SHP0 20400952
    287084 4v6f:DT (3.1) BS04 MG ? GO:0003735 ... Q5SHP0 20400952
    287085 4v6f:DT (3.1) BS05 MG ? GO:0003735 ... Q5SHP0 20400952
    287086 4v6f:DT (3.1) BS06 MG ? GO:0003735 ... Q5SHP0 20400952
    287087 4v6f:DU (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 20400952
    287088 4v6f:DU (3.1) BS02 MG ? GO:0003723 ... Q5SHP9 20400952
    287089 4v6f:DU (3.1) BS03 MG ? GO:0003723 ... Q5SHP9 20400952
    287090 4v6f:DU (3.1) BS04 MG ? GO:0003723 ... Q5SHP9 20400952
    287091 4v6f:DU (3.1) BS05 MG ? GO:0003723 ... Q5SHP9 20400952
    287092 4v6f:DU (3.1) BS06 MG ? GO:0003723 ... Q5SHP9 20400952
    287093 4v6f:DU (3.1) BS07 MG ? GO:0003723 ... Q5SHP9 20400952
    287094 4v6f:DU (3.1) BS08 MG ? GO:0003723 ... Q5SHP9 20400952
    287095 4v6f:DV (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 20400952
    287096 4v6f:DV (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 20400952
    287097 4v6f:DV (3.1) BS03 MG ? GO:0003723 ... Q5SHZ1 20400952
    287098 4v6f:DW (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 20400952
    287099 4v6f:DW (3.1) BS02 MG ? GO:0003735 ... Q5SHP6 20400952
    287100 4v6f:DX (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 20400952
    287101 4v6f:DX (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 20400952
    287102 4v6f:DX (3.1) BS03 MG ? GO:0003735 ... Q5SHQ6 20400952
    287103 4v6f:DY (3.1) BS01 rna ? GO:0005840 ... Q8VVE3 20400952
    287104 4v6f:DY (3.1) BS02 MG ? GO:0005840 ... Q8VVE3 20400952
    287105 4v6f:DY (3.1) BS03 MG ? GO:0005840 ... Q8VVE3 20400952
    287106 4v6f:DZ (3.1) BS01 rna ? GO:0003735 ... P60494 20400952
    287107 4v6f:DZ (3.1) BS02 MG ? GO:0003735 ... P60494 20400952
    287108 4v6f:DZ (3.1) BS03 MG ? GO:0003735 ... P60494 20400952
    287109 4v6g:AE (3.5) BS01 rna ? GO:0003735 ... P80371 20400952
    287110 4v6g:AF (3.5) BS01 rna ? GO:0003676 ... P80372 20400952
    287111 4v6g:AF (3.5) BS02 rna ? GO:0003676 ... P80372 20400952
    287112 4v6g:AG (3.5) BS01 rna ? GO:0003723 ... P80373 20400952
    287113 4v6g:AG (3.5) BS02 ZN ? GO:0003723 ... P80373 20400952
    287114 4v6g:AH (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 20400952
    287115 4v6g:AH (3.5) BS02 rna ? GO:0003723 ... Q5SHQ5 20400952
    287116 4v6g:AI (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 20400952
    287117 4v6g:AJ (3.5) BS01 rna ? GO:0000049 ... P17291 20400952
    287118 4v6g:AJ (3.5) BS02 rna ? GO:0000049 ... P17291 20400952
    287119 4v6g:AK (3.5) BS01 rna ? GO:0003735 ... P0DOY9 20400952
    287120 4v6g:AL (3.5) BS01 rna ? GO:0000049 ... P80374 20400952
    287121 4v6g:AL (3.5) BS02 rna ? GO:0000049 ... P80374 20400952
    287122 4v6g:AM (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 20400952
    287123 4v6g:AN (3.5) BS01 rna ? GO:0003735 ... P80376 20400952
    287124 4v6g:AO (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 20400952
    287125 4v6g:AP (3.5) BS01 rna ? GO:0000049 ... P80377 20400952
    287126 4v6g:AP (3.5) BS02 rna ? GO:0000049 ... P80377 20400952
    287127 4v6g:AQ (3.5) BS01 rna ? GO:0003735 ... P0DOY6 20400952
    287128 4v6g:AQ (3.5) BS02 MG ? GO:0003735 ... P0DOY6 20400952
    287129 4v6g:AR (3.5) BS01 rna ? GO:0003735 ... Q5SJ76 20400952
    287130 4v6g:AR (3.5) BS02 rna ? GO:0003735 ... Q5SJ76 20400952
    287131 4v6g:AS (3.5) BS01 rna N/A GO:0003735 ... N/A 20400952
    287132 4v6g:AT (3.5) BS01 rna ? GO:0003735 ... P0DOY7 20400952
    287133 4v6g:AT (3.5) BS02 MG ? GO:0003735 ... P0DOY7 20400952
    287134 4v6g:AU (3.5) BS01 rna ? GO:0003735 ... Q5SLQ0 20400952
    287135 4v6g:AV (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 20400952
    287136 4v6g:AW (3.5) BS01 rna ? GO:0003723 ... P80380 20400952
    287137 4v6g:AW (3.5) BS02 MG ? GO:0003723 ... P80380 20400952
    287138 4v6g:B0 (3.5) BS01 rna ? GO:0003735 ... Q9Z9H5 20400952
    287139 4v6g:B1 (3.5) BS01 rna ? GO:0000027 ... P60491 20400952
    287140 4v6g:B2 (3.5) BS01 rna ? GO:0003723 ... P60492 20400952
    287141 4v6g:B3 (3.5) BS01 rna ? GO:0003735 ... P60493 20400952
    287142 4v6g:B3 (3.5) BS02 rna ? GO:0003735 ... P60493 20400952
    287143 4v6g:B4 (3.5) BS01 rna ? GO:0003735 ... Q5SJE1 20400952
    287144 4v6g:B5 (3.5) BS01 rna ? GO:0003735 ... P80339 20400952
    287145 4v6g:B6 (3.5) BS01 rna ? GO:0000049 ... P35871 20400952
    287146 4v6g:B7 (3.5) BS01 rna ? GO:0003735 ... P80340 20400952
    287147 4v6g:B8 (3.5) BS01 rna ? GO:0003735 ... Q5SKU1 20400952
    287148 4v6g:BD (3.5) BS01 rna ? GO:0002181 ... P60405 20400952
    287149 4v6g:BD (3.5) BS02 MG ? GO:0002181 ... P60405 20400952
    287150 4v6g:BE (3.5) BS01 rna ? GO:0003735 ... Q5SHN8 20400952
    287151 4v6g:BE (3.5) BS02 MG ? GO:0003735 ... Q5SHN8 20400952
    287152 4v6g:BE (3.5) BS03 MG ? GO:0003735 ... Q5SHN8 20400952
    287153 4v6g:BF (3.5) BS01 rna ? GO:0003735 ... Q5SHN9 20400952
    287154 4v6g:BF (3.5) BS02 MG ? GO:0003735 ... Q5SHN9 20400952
    287155 4v6g:BG (3.5) BS01 rna ? GO:0000049 ... Q5SHQ0 20400952
    287156 4v6g:BG (3.5) BS02 rna ? GO:0000049 ... Q5SHQ0 20400952
    287157 4v6g:BG (3.5) BS03 rna ? GO:0000049 ... Q5SHQ0 20400952
    287158 4v6g:BH (3.5) BS01 rna ? GO:0002181 ... P0DOY8 20400952
    287159 4v6g:BK (3.5) BS01 rna ? GO:0003735 ... Q5SLQ1 20400952
    287160 4v6g:BK (3.5) BS02 rna ? GO:0003735 ... Q5SLQ1 20400952
    287161 4v6g:BK (3.5) BS03 MG ? GO:0003735 ... Q5SLQ1 20400952
    287162 4v6g:BM (3.5) BS01 rna ? GO:0003729 ... P60488 20400952
    287163 4v6g:BN (3.5) BS01 rna ? GO:0003735 ... Q5SHP8 20400952
    287164 4v6g:BN (3.5) BS02 rna ? GO:0003735 ... Q5SHP8 20400952
    287165 4v6g:BO (3.5) BS01 rna ? GO:0003735 ... Q5SHQ7 20400952
    287166 4v6g:BP (3.5) BS01 rna ? GO:0000049 ... P60489 20400952
    287167 4v6g:BP (3.5) BS02 rna ? GO:0000049 ... P60489 20400952
    287168 4v6g:BQ (3.5) BS01 rna ? GO:0003735 ... Q5SHQ4 20400952
    287169 4v6g:BQ (3.5) BS02 rna ? GO:0003735 ... Q5SHQ4 20400952
    287170 4v6g:BQ (3.5) BS03 MG ? GO:0003735 ... Q5SHQ4 20400952
    287171 4v6g:BR (3.5) BS01 rna ? GO:0003735 ... P60490 20400952
    287172 4v6g:BR (3.5) BS02 rna ? GO:0003735 ... P60490 20400952
    287173 4v6g:BS (3.5) BS01 rna ? GO:0003735 ... Q5SHP3 20400952
    287174 4v6g:BT (3.5) BS01 rna ? GO:0003735 ... Q5SHP0 20400952
    287175 4v6g:BU (3.5) BS01 rna ? GO:0003723 ... Q5SHP9 20400952
    287176 4v6g:BV (3.5) BS01 rna ? GO:0003723 ... Q5SHZ1 20400952
    287177 4v6g:BV (3.5) BS02 rna ? GO:0003723 ... Q5SHZ1 20400952
    287178 4v6g:BW (3.5) BS01 rna ? GO:0003735 ... Q5SHP6 20400952
    287179 4v6g:BX (3.5) BS01 rna ? GO:0003735 ... Q5SHQ6 20400952
    287180 4v6g:BX (3.5) BS02 rna ? GO:0003735 ... Q5SHQ6 20400952
    287181 4v6g:BZ (3.5) BS01 rna ? GO:0003735 ... P60494 20400952
    287182 4v6g:CE (3.5) BS01 rna ? GO:0003735 ... P80371 20400952
    287183 4v6g:CF (3.5) BS01 rna ? GO:0003676 ... P80372 20400952
    287184 4v6g:CF (3.5) BS02 rna ? GO:0003676 ... P80372 20400952
    287185 4v6g:CG (3.5) BS01 rna ? GO:0003723 ... P80373 20400952
    287186 4v6g:CG (3.5) BS02 ZN ? GO:0003723 ... P80373 20400952
    287187 4v6g:CH (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 20400952
    287188 4v6g:CH (3.5) BS02 rna ? GO:0003723 ... Q5SHQ5 20400952
    287189 4v6g:CI (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 20400952
    287190 4v6g:CJ (3.5) BS01 rna ? GO:0000049 ... P17291 20400952
    287191 4v6g:CJ (3.5) BS02 rna ? GO:0000049 ... P17291 20400952
    287192 4v6g:CK (3.5) BS01 rna ? GO:0003735 ... P0DOY9 20400952
    287193 4v6g:CK (3.5) BS02 MG ? GO:0003735 ... P0DOY9 20400952
    287194 4v6g:CL (3.5) BS01 rna ? GO:0000049 ... P80374 20400952
    287195 4v6g:CL (3.5) BS02 rna ? GO:0000049 ... P80374 20400952
    287196 4v6g:CL (3.5) BS03 MG ? GO:0000049 ... P80374 20400952
    287197 4v6g:CM (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 20400952
    287198 4v6g:CN (3.5) BS01 rna ? GO:0003735 ... P80376 20400952
    287199 4v6g:CO (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 20400952
    287200 4v6g:CP (3.5) BS01 rna ? GO:0000049 ... P80377 20400952

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).