SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1428 1429 1430 1431 1432 1433 1434 1435 1436 1437 1438 1439 1440 1441 1442 1443 1444 1445 1446 1447 1448 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    287401 4v6k:BC (8.25) BS01 rna ? GO:0003723 ... P0CE48 21378755
    287402 4v6k:BC (8.25) BS02 rna ? GO:0003723 ... P0CE48 21378755
    287403 4v6k:BC (8.25) BS03 rna ? GO:0003723 ... P0CE48 21378755
    287404 4v6k:BF (8.25) BS01 rna ? GO:0000028 ... P0A7V0 21378755
    287405 4v6k:BG (8.25) BS01 rna ? GO:0000028 ... P0A7V3 21378755
    287406 4v6k:BG (8.25) BS02 rna ? GO:0000028 ... P0A7V3 21378755
    287407 4v6k:BH (8.25) BS01 rna ? GO:0000028 ... P0A7V8 21378755
    287408 4v6k:BI (8.25) BS01 rna ? GO:0000028 ... P0A7W1 21378755
    287409 4v6k:BI (8.25) BS02 rna ? GO:0000028 ... P0A7W1 21378755
    287410 4v6k:BJ (8.25) BS01 rna ? GO:0002181 ... P02358 21378755
    287411 4v6k:BK (8.25) BS01 rna ? GO:0000028 ... P02359 21378755
    287412 4v6k:BK (8.25) BS02 rna ? GO:0000028 ... P02359 21378755
    287413 4v6k:BL (8.25) BS01 rna ? GO:0000028 ... P0A7W7 21378755
    287414 4v6k:BM (8.25) BS01 rna ? GO:0000049 ... P0A7X3 21378755
    287415 4v6k:BN (8.25) BS01 rna ? GO:0000049 ... P0A7R5 21378755
    287416 4v6k:BO (8.25) BS01 rna ? GO:0002181 ... P0A7R9 21378755
    287417 4v6k:BO (8.25) BS02 rna ? GO:0002181 ... P0A7R9 21378755
    287418 4v6k:BP (8.25) BS01 rna ? GO:0000049 ... P0A7S3 21378755
    287419 4v6k:BP (8.25) BS02 rna ? GO:0000049 ... P0A7S3 21378755
    287420 4v6k:BQ (8.25) BS01 rna ? GO:0000049 ... P0A7S9 21378755
    287421 4v6k:BQ (8.25) BS02 rna ? GO:0000049 ... P0A7S9 21378755
    287422 4v6k:BR (8.25) BS01 rna ? GO:0000028 ... P0AG59 21378755
    287423 4v6k:BS (8.25) BS01 rna ? GO:0003735 ... Q8X9M2 21378755
    287424 4v6k:BS (8.25) BS02 rna ? GO:0003735 ... Q8X9M2 21378755
    287425 4v6k:BT (8.25) BS01 rna ? GO:0000028 ... P0A7T3 21378755
    287426 4v6k:BU (8.25) BS01 rna ? GO:0000028 ... P0AG63 21378755
    287427 4v6k:BV (8.25) BS01 rna ? GO:0002181 ... P0A7T7 21378755
    287428 4v6k:BW (8.25) BS01 rna ? GO:0000028 ... P0A7U3 21378755
    287429 4v6k:BW (8.25) BS02 rna ? GO:0000028 ... P0A7U3 21378755
    287430 4v6k:BX (8.25) BS01 rna ? GO:0000028 ... P0A7U7 21378755
    287431 4v6k:BY (8.25) BS01 rna ? GO:0000028 ... P68679 21378755
    287432 4v6k:BY (8.25) BS02 rna ? GO:0000028 ... P68679 21378755
    287433 4v6l:AC (13.2) BS01 rna ? GO:0003723 ... P0CE48 21378755
    287434 4v6l:AC (13.2) BS02 rna ? GO:0003723 ... P0CE48 21378755
    287435 4v6l:AC (13.2) BS03 rna ? GO:0003723 ... P0CE48 21378755
    287436 4v6l:AF (13.2) BS01 rna ? GO:0000028 ... P0A7V0 21378755
    287437 4v6l:AG (13.2) BS01 rna ? GO:0000028 ... P0A7V3 21378755
    287438 4v6l:AG (13.2) BS02 rna ? GO:0000028 ... P0A7V3 21378755
    287439 4v6l:AH (13.2) BS01 rna ? GO:0000028 ... P0A7V8 21378755
    287440 4v6l:AI (13.2) BS01 rna ? GO:0000028 ... P0A7W1 21378755
    287441 4v6l:AI (13.2) BS02 rna ? GO:0000028 ... P0A7W1 21378755
    287442 4v6l:AJ (13.2) BS01 rna ? GO:0002181 ... P02358 21378755
    287443 4v6l:AK (13.2) BS01 rna ? GO:0000028 ... P02359 21378755
    287444 4v6l:AK (13.2) BS02 rna ? GO:0000028 ... P02359 21378755
    287445 4v6l:AL (13.2) BS01 rna ? GO:0000028 ... P0A7W7 21378755
    287446 4v6l:AM (13.2) BS01 rna ? GO:0000049 ... P0A7X3 21378755
    287447 4v6l:AM (13.2) BS02 rna ? GO:0000049 ... P0A7X3 21378755
    287448 4v6l:AN (13.2) BS01 rna ? GO:0000049 ... P0A7R5 21378755
    287449 4v6l:AO (13.2) BS01 rna ? GO:0002181 ... P0A7R9 21378755
    287450 4v6l:AO (13.2) BS02 rna ? GO:0002181 ... P0A7R9 21378755
    287451 4v6l:AP (13.2) BS01 rna ? GO:0000049 ... P0A7S3 21378755
    287452 4v6l:AP (13.2) BS02 rna ? GO:0000049 ... P0A7S3 21378755
    287453 4v6l:AQ (13.2) BS01 rna ? GO:0000049 ... P0A7S9 21378755
    287454 4v6l:AQ (13.2) BS02 rna ? GO:0000049 ... P0A7S9 21378755
    287455 4v6l:AR (13.2) BS01 rna ? GO:0000028 ... P0AG59 21378755
    287456 4v6l:AS (13.2) BS01 rna ? GO:0003735 ... Q8X9M2 21378755
    287457 4v6l:AS (13.2) BS02 rna ? GO:0003735 ... Q8X9M2 21378755
    287458 4v6l:AT (13.2) BS01 rna ? GO:0000028 ... P0A7T3 21378755
    287459 4v6l:AU (13.2) BS01 rna ? GO:0000028 ... P0AG63 21378755
    287460 4v6l:AV (13.2) BS01 rna ? GO:0002181 ... P0A7T7 21378755
    287461 4v6l:AW (13.2) BS01 rna ? GO:0000028 ... P0A7U3 21378755
    287462 4v6l:AX (13.2) BS01 rna ? GO:0000028 ... P0A7U7 21378755
    287463 4v6l:AY (13.2) BS01 rna ? GO:0000028 ... P68679 21378755
    287464 4v6l:AY (13.2) BS02 rna ? GO:0000028 ... P68679 21378755
    287465 4v6l:BC (13.2) BS01 rna ? GO:0000027 ... P0A7L0 21378755
    287466 4v6l:BD (13.2) BS01 rna ? GO:0000027 ... P60422 21378755
    287467 4v6l:BE (13.2) BS01 rna ? GO:0000027 ... P60438 21378755
    287468 4v6l:BF (13.2) BS01 rna ? GO:0001070 ... P60723 21378755
    287469 4v6l:BG (13.2) BS01 rna ? GO:0000027 ... P62399 21378755
    287470 4v6l:BG (13.2) BS02 rna ? GO:0000027 ... P62399 21378755
    287471 4v6l:BG (13.2) BS03 rna ? GO:0000027 ... P62399 21378755
    287472 4v6l:BH (13.2) BS01 rna ? GO:0000027 ... P0AG55 21378755
    287473 4v6l:BI (13.2) BS01 rna ? GO:0002181 ... P0A7R1 21378755
    287474 4v6l:BJ (13.2) BS01 rna ? GO:0000027 ... P0A7J7 21378755
    287475 4v6l:BK (13.2) BS01 rna ? GO:0002181 ... P0AA10 21378755
    287476 4v6l:BL (13.2) BS01 rna ? GO:0002181 ... P0ADY3 21378755
    287477 4v6l:BL (13.2) BS02 rna ? GO:0002181 ... P0ADY3 21378755
    287478 4v6l:BM (13.2) BS01 rna ? GO:0002181 ... P02413 21378755
    287479 4v6l:BN (13.2) BS01 rna ? GO:0000027 ... P0ADY7 21378755
    287480 4v6l:BN (13.2) BS02 rna ? GO:0000027 ... P0ADY7 21378755
    287481 4v6l:BO (13.2) BS01 rna ? GO:0000027 ... P0AG44 21378755
    287482 4v6l:BP (13.2) BS01 rna ? GO:0002181 ... P0C018 21378755
    287483 4v6l:BP (13.2) BS02 rna ? GO:0002181 ... P0C018 21378755
    287484 4v6l:BQ (13.2) BS01 rna ? GO:0000027 ... P0A7K6 21378755
    287485 4v6l:BQ (13.2) BS02 rna ? GO:0000027 ... P0A7K6 21378755
    287486 4v6l:BR (13.2) BS01 rna ? GO:0000027 ... P0A7L3 21378755
    287487 4v6l:BS (13.2) BS01 rna ? GO:0002181 ... P0AG48 21378755
    287488 4v6l:BT (13.2) BS01 rna ? GO:0002181 ... P61175 21378755
    287489 4v6l:BU (13.2) BS01 rna ? GO:0000027 ... P0ADZ0 21378755
    287490 4v6l:BV (13.2) BS01 rna ? GO:0000027 ... P60624 21378755
    287491 4v6l:BW (13.2) BS01 rna ? GO:0000027 ... P68919 21378755
    287492 4v6l:BX (13.2) BS01 rna ? GO:0000027 ... P0A7L8 21378755
    287493 4v6l:BX (13.2) BS02 rna ? GO:0000027 ... P0A7L8 21378755
    287494 4v6l:BY (13.2) BS01 rna ? GO:0000027 ... P0A7M2 21378755
    287495 4v6l:BZ (13.2) BS01 rna ? GO:0000027 ... P0A7M6 21378755
    287496 4v6l:Ba (13.2) BS01 rna ? GO:0000027 ... P0AG51 21378755
    287497 4v6l:Ba (13.2) BS02 rna ? GO:0000027 ... P0AG51 21378755
    287498 4v6l:Bb (13.2) BS01 rna ? GO:0002181 ... P0A7M9 21378755
    287499 4v6l:Bb (13.2) BS02 rna ? GO:0002181 ... P0A7M9 21378755
    287500 4v6l:Bc (13.2) BS01 rna ? GO:0000027 ... P0A7N4 21378755
    287501 4v6l:Bd (13.2) BS01 rna ? GO:0000027 ... P0A7N9 21378755
    287502 4v6l:Be (13.2) BS01 rna ? GO:0002181 ... P0A7P5 21378755
    287503 4v6l:Bf (13.2) BS01 rna ? GO:0002181 ... P0A7Q1 21378755
    287504 4v6l:Bg (13.2) BS01 rna N/A GO:0003735 ... N/A 21378755
    287505 4v6m:AB (7.1) BS01 rna ? GO:0000028 ... P0A7V0 21499241
    287506 4v6m:AC (7.1) BS01 rna ? GO:0000028 ... P0A7V3 21499241
    287507 4v6m:AD (7.1) BS01 rna ? GO:0000028 ... P0A7V8 21499241
    287508 4v6m:AE (7.1) BS01 rna ? GO:0000028 ... P0A7W1 21499241
    287509 4v6m:AF (7.1) BS01 rna ? GO:0002181 ... P02358 21499241
    287510 4v6m:AG (7.1) BS01 rna ? GO:0000028 ... P02359 21499241
    287511 4v6m:AG (7.1) BS02 rna ? GO:0000028 ... P02359 21499241
    287512 4v6m:AH (7.1) BS01 rna ? GO:0000028 ... P0A7W7 21499241
    287513 4v6m:AI (7.1) BS01 rna ? GO:0000049 ... P0A7X3 21499241
    287514 4v6m:AJ (7.1) BS01 rna ? GO:0000049 ... P0A7R5 21499241
    287515 4v6m:AK (7.1) BS01 rna ? GO:0002181 ... P0A7R9 21499241
    287516 4v6m:AL (7.1) BS01 rna ? GO:0000049 ... P0A7S3 21499241
    287517 4v6m:AM (7.1) BS01 rna ? GO:0003676 ... P0ADZ4 21499241
    287518 4v6m:AM (7.1) BS02 rna ? GO:0003676 ... P0ADZ4 21499241
    287519 4v6m:AN (7.1) BS01 rna ? GO:0000028 ... P0AG59 21499241
    287520 4v6m:AO (7.1) BS01 rna N/A GO:0003735 ... N/A 21499241
    287521 4v6m:AO (7.1) BS02 rna N/A GO:0003735 ... N/A 21499241
    287522 4v6m:AP (7.1) BS01 rna ? GO:0000028 ... P0A7T3 21499241
    287523 4v6m:AQ (7.1) BS01 rna ? GO:0000028 ... P0AG63 21499241
    287524 4v6m:AR (7.1) BS01 rna ? GO:0002181 ... P0A7T7 21499241
    287525 4v6m:AS (7.1) BS01 rna ? GO:0000028 ... P0A7U3 21499241
    287526 4v6m:AS (7.1) BS02 rna ? GO:0000028 ... P0A7U3 21499241
    287527 4v6m:AT (7.1) BS01 rna ? GO:0000028 ... P0A7U7 21499241
    287528 4v6m:AU (7.1) BS01 rna ? GO:0000028 ... P68679 21499241
    287529 4v6m:AZ (7.1) BS01 rna ? GO:0090529 ... Q8X9Y5 21499241
    287530 4v6m:B0 (7.1) BS01 rna ? GO:0000027 ... P0A7N4 21499241
    287531 4v6m:B1 (7.1) BS01 rna ? GO:0000027 ... P0A7N9 21499241
    287532 4v6m:B2 (7.1) BS01 rna ? GO:0002181 ... P0A7P5 21499241
    287533 4v6m:B3 (7.1) BS01 rna ? GO:0002181 ... P0A7Q1 21499241
    287534 4v6m:B4 (7.1) BS01 rna ? GO:0002181 ... P0A7Q6 21499241
    287535 4v6m:B5 (7.1) BS01 rna ? GO:0000027 ... P0A7L0 21499241
    287536 4v6m:B6 (7.1) BS01 rna ? GO:0000027 ... P60422 21499241
    287537 4v6m:B6 (7.1) BS02 rna ? GO:0000027 ... P60422 21499241
    287538 4v6m:BA (7.1) BS01 rna N/A GO:0015031 ... N/A 21499241
    287539 4v6m:BD (7.1) BS01 rna ? GO:0000027 ... P60438 21499241
    287540 4v6m:BE (7.1) BS01 rna ? GO:0001070 ... P60723 21499241
    287541 4v6m:BF (7.1) BS01 rna ? GO:0000027 ... P62399 21499241
    287542 4v6m:BF (7.1) BS02 rna ? GO:0000027 ... P62399 21499241
    287543 4v6m:BF (7.1) BS03 rna ? GO:0000027 ... P62399 21499241
    287544 4v6m:BG (7.1) BS01 rna ? GO:0000027 ... P0AG55 21499241
    287545 4v6m:BH (7.1) BS01 rna ? GO:0002181 ... P0A7R1 21499241
    287546 4v6m:BI (7.1) BS01 rna ? GO:0000027 ... P0A7J7 21499241
    287547 4v6m:BJ (7.1) BS01 rna ? GO:0002181 ... P0AA10 21499241
    287548 4v6m:BK (7.1) BS01 rna ? GO:0002181 ... P0ADY3 21499241
    287549 4v6m:BK (7.1) BS02 rna ? GO:0002181 ... P0ADY3 21499241
    287550 4v6m:BL (7.1) BS01 rna ? GO:0002181 ... P02413 21499241
    287551 4v6m:BM (7.1) BS01 rna ? GO:0000027 ... P0ADY7 21499241
    287552 4v6m:BM (7.1) BS02 rna ? GO:0000027 ... P0ADY7 21499241
    287553 4v6m:BN (7.1) BS01 rna ? GO:0000027 ... P0AG44 21499241
    287554 4v6m:BO (7.1) BS01 rna ? GO:0002181 ... P0C018 21499241
    287555 4v6m:BO (7.1) BS02 rna ? GO:0002181 ... P0C018 21499241
    287556 4v6m:BP (7.1) BS01 rna ? GO:0000027 ... P0A7K6 21499241
    287557 4v6m:BP (7.1) BS02 rna ? GO:0000027 ... P0A7K6 21499241
    287558 4v6m:BQ (7.1) BS01 rna ? GO:0000027 ... P0A7L3 21499241
    287559 4v6m:BR (7.1) BS01 rna ? GO:0002181 ... P0AG48 21499241
    287560 4v6m:BS (7.1) BS01 rna ? GO:0002181 ... P61175 21499241
    287561 4v6m:BT (7.1) BS01 rna ? GO:0000027 ... P0ADZ0 21499241
    287562 4v6m:BU (7.1) BS01 rna ? GO:0000027 ... P60624 21499241
    287563 4v6m:BV (7.1) BS01 rna ? GO:0000027 ... P68919 21499241
    287564 4v6m:BW (7.1) BS01 rna ? GO:0000027 ... P0A7L8 21499241
    287565 4v6m:BW (7.1) BS02 rna ? GO:0000027 ... P0A7L8 21499241
    287566 4v6m:BW (7.1) BS03 rna ? GO:0000027 ... P0A7L8 21499241
    287567 4v6m:BX (7.1) BS01 rna ? GO:0000027 ... P0A7M2 21499241
    287568 4v6m:BY (7.1) BS01 rna ? GO:0000027 ... P0A7M6 21499241
    287569 4v6m:BZ (7.1) BS01 rna ? GO:0000027 ... P0AG51 21499241
    287570 4v6m:BZ (7.1) BS02 rna ? GO:0000027 ... P0AG51 21499241
    287571 4v6n:A0 (12.1) BS01 rna ? GO:0000027 ... P0A7M6 22467828
    287572 4v6n:A1 (12.1) BS01 rna ? GO:0000027 ... P0AG51 22467828
    287573 4v6n:A1 (12.1) BS02 rna ? GO:0000027 ... P0AG51 22467828
    287574 4v6n:A2 (12.1) BS01 rna ? GO:0002181 ... P0A7M9 22467828
    287575 4v6n:A2 (12.1) BS02 rna ? GO:0002181 ... P0A7M9 22467828
    287576 4v6n:A3 (12.1) BS01 rna ? GO:0000027 ... P0A7N4 22467828
    287577 4v6n:A4 (12.1) BS01 rna ? GO:0000027 ... P0A7N9 22467828
    287578 4v6n:A5 (12.1) BS01 rna ? GO:0002181 ... P0A7P5 22467828
    287579 4v6n:A6 (12.1) BS01 rna ? GO:0002181 ... P0A7Q1 22467828
    287580 4v6n:A7 (12.1) BS01 rna ? GO:0002181 ... P0A7Q6 22467828
    287581 4v6n:AC (12.1) BS01 rna ? GO:0000027 ... P0A7L0 22467828
    287582 4v6n:AD (12.1) BS01 rna ? GO:0000027 ... P60422 22467828
    287583 4v6n:AE (12.1) BS01 rna ? GO:0000027 ... P60438 22467828
    287584 4v6n:AF (12.1) BS01 rna ? GO:0001070 ... P60723 22467828
    287585 4v6n:AG (12.1) BS01 rna ? GO:0000027 ... P62399 22467828
    287586 4v6n:AG (12.1) BS02 rna ? GO:0000027 ... P62399 22467828
    287587 4v6n:AH (12.1) BS01 rna ? GO:0000027 ... P0AG55 22467828
    287588 4v6n:AI (12.1) BS01 rna ? GO:0002181 ... P0A7R1 22467828
    287589 4v6n:AJ (12.1) BS01 rna ? GO:0002181 ... P0A7J3 22467828
    287590 4v6n:AK (12.1) BS01 rna ? GO:0000027 ... P0A7J7 22467828
    287591 4v6n:AL (12.1) BS01 rna ? GO:0002181 ... P0AA10 22467828
    287592 4v6n:AM (12.1) BS01 rna ? GO:0002181 ... P0ADY3 22467828
    287593 4v6n:AM (12.1) BS02 rna ? GO:0002181 ... P0ADY3 22467828
    287594 4v6n:AN (12.1) BS01 rna ? GO:0002181 ... P02413 22467828
    287595 4v6n:AO (12.1) BS01 rna ? GO:0000027 ... P0ADY7 22467828
    287596 4v6n:AO (12.1) BS02 rna ? GO:0000027 ... P0ADY7 22467828
    287597 4v6n:AO (12.1) BS03 rna ? GO:0000027 ... P0ADY7 22467828
    287598 4v6n:AP (12.1) BS01 rna ? GO:0000027 ... P0AG44 22467828
    287599 4v6n:AQ (12.1) BS01 rna ? GO:0002181 ... P0C018 22467828
    287600 4v6n:AQ (12.1) BS02 rna ? GO:0002181 ... P0C018 22467828

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).