SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    287801 4v6q:AI (11.5) BS01 rna ? GO:0002181 ... P02358 22467828
    287802 4v6q:AI (11.5) BS02 rna ? GO:0002181 ... P02358 22467828
    287803 4v6q:AJ (11.5) BS01 rna ? GO:0000028 ... P02359 22467828
    287804 4v6q:AJ (11.5) BS02 rna ? GO:0000028 ... P02359 22467828
    287805 4v6q:AK (11.5) BS01 rna ? GO:0000028 ... P0A7W7 22467828
    287806 4v6q:AL (11.5) BS01 rna ? GO:0000049 ... P0A7X3 22467828
    287807 4v6q:AM (11.5) BS01 rna ? GO:0000049 ... P0A7R5 22467828
    287808 4v6q:AN (11.5) BS01 rna ? GO:0002181 ... P0A7R9 22467828
    287809 4v6q:AN (11.5) BS02 rna ? GO:0002181 ... P0A7R9 22467828
    287810 4v6q:AN (11.5) BS03 rna ? GO:0002181 ... P0A7R9 22467828
    287811 4v6q:AO (11.5) BS01 rna ? GO:0000049 ... P0A7S3 22467828
    287812 4v6q:AP (11.5) BS01 rna ? GO:0000049 ... P0A7S9 22467828
    287813 4v6q:AP (11.5) BS02 rna ? GO:0000049 ... P0A7S9 22467828
    287814 4v6q:AQ (11.5) BS01 rna ? GO:0000028 ... P0AG59 22467828
    287815 4v6q:AR (11.5) BS01 rna ? GO:0003735 ... Q8X9M2 22467828
    287816 4v6q:AR (11.5) BS02 rna ? GO:0003735 ... Q8X9M2 22467828
    287817 4v6q:AS (11.5) BS01 rna ? GO:0000028 ... P0A7T3 22467828
    287818 4v6q:AT (11.5) BS01 rna ? GO:0000028 ... P0AG63 22467828
    287819 4v6q:AU (11.5) BS01 rna ? GO:0002181 ... P0A7T7 22467828
    287820 4v6q:AU (11.5) BS02 rna ? GO:0002181 ... P0A7T7 22467828
    287821 4v6q:AV (11.5) BS01 rna ? GO:0000028 ... P0A7U3 22467828
    287822 4v6q:AV (11.5) BS02 rna ? GO:0000028 ... P0A7U3 22467828
    287823 4v6q:AW (11.5) BS01 rna ? GO:0000028 ... P0A7U7 22467828
    287824 4v6q:AX (11.5) BS01 rna ? GO:0000028 ... P68679 22467828
    287825 4v6q:AX (11.5) BS02 rna ? GO:0000028 ... P68679 22467828
    287826 4v6q:B0 (11.5) BS01 rna ? GO:0000027 ... P0A7M6 22467828
    287827 4v6q:B1 (11.5) BS01 rna ? GO:0000027 ... P0AG51 22467828
    287828 4v6q:B1 (11.5) BS02 rna ? GO:0000027 ... P0AG51 22467828
    287829 4v6q:B2 (11.5) BS01 rna ? GO:0002181 ... P0A7M9 22467828
    287830 4v6q:B2 (11.5) BS02 rna ? GO:0002181 ... P0A7M9 22467828
    287831 4v6q:B3 (11.5) BS01 rna ? GO:0000027 ... P0A7N4 22467828
    287832 4v6q:B4 (11.5) BS01 rna ? GO:0000027 ... P0A7N9 22467828
    287833 4v6q:B5 (11.5) BS01 rna ? GO:0002181 ... P0A7P5 22467828
    287834 4v6q:B6 (11.5) BS01 rna ? GO:0002181 ... P0A7Q1 22467828
    287835 4v6q:B7 (11.5) BS01 rna ? GO:0002181 ... P0A7Q6 22467828
    287836 4v6q:BC (11.5) BS01 rna ? GO:0000027 ... P0A7L0 22467828
    287837 4v6q:BC (11.5) BS02 rna ? GO:0000027 ... P0A7L0 22467828
    287838 4v6q:BD (11.5) BS01 rna ? GO:0000027 ... P60422 22467828
    287839 4v6q:BD (11.5) BS02 rna ? GO:0000027 ... P60422 22467828
    287840 4v6q:BE (11.5) BS01 rna ? GO:0000027 ... P60438 22467828
    287841 4v6q:BF (11.5) BS01 rna ? GO:0001070 ... P60723 22467828
    287842 4v6q:BG (11.5) BS01 rna ? GO:0000027 ... P62399 22467828
    287843 4v6q:BG (11.5) BS02 rna ? GO:0000027 ... P62399 22467828
    287844 4v6q:BH (11.5) BS01 rna ? GO:0000027 ... P0AG55 22467828
    287845 4v6q:BI (11.5) BS01 rna ? GO:0002181 ... P0A7R1 22467828
    287846 4v6q:BJ (11.5) BS01 rna ? GO:0002181 ... P0A7J3 22467828
    287847 4v6q:BK (11.5) BS01 rna ? GO:0000027 ... P0A7J7 22467828
    287848 4v6q:BL (11.5) BS01 rna ? GO:0002181 ... P0AA10 22467828
    287849 4v6q:BM (11.5) BS01 rna ? GO:0002181 ... P0ADY3 22467828
    287850 4v6q:BM (11.5) BS02 rna ? GO:0002181 ... P0ADY3 22467828
    287851 4v6q:BN (11.5) BS01 rna ? GO:0002181 ... P02413 22467828
    287852 4v6q:BO (11.5) BS01 rna ? GO:0000027 ... P0ADY7 22467828
    287853 4v6q:BO (11.5) BS02 rna ? GO:0000027 ... P0ADY7 22467828
    287854 4v6q:BO (11.5) BS03 rna ? GO:0000027 ... P0ADY7 22467828
    287855 4v6q:BP (11.5) BS01 rna ? GO:0000027 ... P0AG44 22467828
    287856 4v6q:BQ (11.5) BS01 rna ? GO:0002181 ... P0C018 22467828
    287857 4v6q:BQ (11.5) BS02 rna ? GO:0002181 ... P0C018 22467828
    287858 4v6q:BR (11.5) BS01 rna ? GO:0000027 ... P0A7K6 22467828
    287859 4v6q:BR (11.5) BS02 rna ? GO:0000027 ... P0A7K6 22467828
    287860 4v6q:BS (11.5) BS01 rna ? GO:0000027 ... P0A7L3 22467828
    287861 4v6q:BT (11.5) BS01 rna ? GO:0002181 ... P0AG48 22467828
    287862 4v6q:BU (11.5) BS01 rna ? GO:0002181 ... P61175 22467828
    287863 4v6q:BV (11.5) BS01 rna ? GO:0000027 ... P0ADZ0 22467828
    287864 4v6q:BW (11.5) BS01 rna ? GO:0000027 ... P60624 22467828
    287865 4v6q:BX (11.5) BS01 rna ? GO:0000027 ... P68919 22467828
    287866 4v6q:BX (11.5) BS02 rna ? GO:0000027 ... P68919 22467828
    287867 4v6q:BY (11.5) BS01 rna ? GO:0000027 ... P0A7L8 22467828
    287868 4v6q:BY (11.5) BS02 rna ? GO:0000027 ... P0A7L8 22467828
    287869 4v6q:BY (11.5) BS03 rna ? GO:0000027 ... P0A7L8 22467828
    287870 4v6q:BZ (11.5) BS01 rna ? GO:0000027 ... P0A7M2 22467828
    287871 4v6r:AE (11.5) BS01 rna ? GO:0000028 ... P0A7V0 22467828
    287872 4v6r:AF (11.5) BS01 rna ? GO:0000028 ... P0A7V3 22467828
    287873 4v6r:AF (11.5) BS02 rna ? GO:0000028 ... P0A7V3 22467828
    287874 4v6r:AG (11.5) BS01 rna ? GO:0000028 ... P0A7V8 22467828
    287875 4v6r:AG (11.5) BS02 rna ? GO:0000028 ... P0A7V8 22467828
    287876 4v6r:AH (11.5) BS01 rna ? GO:0000028 ... P0A7W1 22467828
    287877 4v6r:AH (11.5) BS02 rna ? GO:0000028 ... P0A7W1 22467828
    287878 4v6r:AI (11.5) BS01 rna ? GO:0002181 ... P02358 22467828
    287879 4v6r:AI (11.5) BS02 rna ? GO:0002181 ... P02358 22467828
    287880 4v6r:AJ (11.5) BS01 rna ? GO:0000028 ... P02359 22467828
    287881 4v6r:AJ (11.5) BS02 rna ? GO:0000028 ... P02359 22467828
    287882 4v6r:AK (11.5) BS01 rna ? GO:0000028 ... P0A7W7 22467828
    287883 4v6r:AL (11.5) BS01 rna ? GO:0000049 ... P0A7X3 22467828
    287884 4v6r:AM (11.5) BS01 rna ? GO:0000049 ... P0A7R5 22467828
    287885 4v6r:AN (11.5) BS01 rna ? GO:0002181 ... P0A7R9 22467828
    287886 4v6r:AN (11.5) BS02 rna ? GO:0002181 ... P0A7R9 22467828
    287887 4v6r:AO (11.5) BS01 rna ? GO:0000049 ... P0A7S3 22467828
    287888 4v6r:AP (11.5) BS01 rna ? GO:0000049 ... P0A7S9 22467828
    287889 4v6r:AP (11.5) BS02 rna ? GO:0000049 ... P0A7S9 22467828
    287890 4v6r:AQ (11.5) BS01 rna ? GO:0000028 ... P0AG59 22467828
    287891 4v6r:AR (11.5) BS01 rna ? GO:0003735 ... Q8X9M2 22467828
    287892 4v6r:AR (11.5) BS02 rna ? GO:0003735 ... Q8X9M2 22467828
    287893 4v6r:AS (11.5) BS01 rna ? GO:0000028 ... P0A7T3 22467828
    287894 4v6r:AT (11.5) BS01 rna ? GO:0000028 ... P0AG63 22467828
    287895 4v6r:AU (11.5) BS01 rna ? GO:0002181 ... P0A7T7 22467828
    287896 4v6r:AU (11.5) BS02 rna ? GO:0002181 ... P0A7T7 22467828
    287897 4v6r:AV (11.5) BS01 rna ? GO:0000028 ... P0A7U3 22467828
    287898 4v6r:AV (11.5) BS02 rna ? GO:0000028 ... P0A7U3 22467828
    287899 4v6r:AV (11.5) BS03 rna ? GO:0000028 ... P0A7U3 22467828
    287900 4v6r:AW (11.5) BS01 rna ? GO:0000028 ... P0A7U7 22467828
    287901 4v6r:AX (11.5) BS01 rna ? GO:0000028 ... P68679 22467828
    287902 4v6r:AX (11.5) BS02 rna ? GO:0000028 ... P68679 22467828
    287903 4v6r:B0 (11.5) BS01 rna ? GO:0000027 ... P0A7M6 22467828
    287904 4v6r:B1 (11.5) BS01 rna ? GO:0000027 ... P0AG51 22467828
    287905 4v6r:B1 (11.5) BS02 rna ? GO:0000027 ... P0AG51 22467828
    287906 4v6r:B2 (11.5) BS01 rna ? GO:0002181 ... P0A7M9 22467828
    287907 4v6r:B2 (11.5) BS02 rna ? GO:0002181 ... P0A7M9 22467828
    287908 4v6r:B3 (11.5) BS01 rna ? GO:0000027 ... P0A7N4 22467828
    287909 4v6r:B4 (11.5) BS01 rna ? GO:0000027 ... P0A7N9 22467828
    287910 4v6r:B5 (11.5) BS01 rna ? GO:0002181 ... P0A7P5 22467828
    287911 4v6r:B6 (11.5) BS01 rna ? GO:0002181 ... P0A7Q1 22467828
    287912 4v6r:B7 (11.5) BS01 rna ? GO:0002181 ... P0A7Q6 22467828
    287913 4v6r:BC (11.5) BS01 rna ? GO:0000027 ... P0A7L0 22467828
    287914 4v6r:BD (11.5) BS01 rna ? GO:0000027 ... P60422 22467828
    287915 4v6r:BE (11.5) BS01 rna ? GO:0000027 ... P60438 22467828
    287916 4v6r:BF (11.5) BS01 rna ? GO:0001070 ... P60723 22467828
    287917 4v6r:BG (11.5) BS01 rna ? GO:0000027 ... P62399 22467828
    287918 4v6r:BG (11.5) BS02 rna ? GO:0000027 ... P62399 22467828
    287919 4v6r:BH (11.5) BS01 rna ? GO:0000027 ... P0AG55 22467828
    287920 4v6r:BI (11.5) BS01 rna ? GO:0002181 ... P0A7R1 22467828
    287921 4v6r:BJ (11.5) BS01 rna ? GO:0002181 ... P0A7J3 22467828
    287922 4v6r:BK (11.5) BS01 rna ? GO:0000027 ... P0A7J7 22467828
    287923 4v6r:BL (11.5) BS01 rna ? GO:0002181 ... P0AA10 22467828
    287924 4v6r:BM (11.5) BS01 rna ? GO:0002181 ... P0ADY3 22467828
    287925 4v6r:BM (11.5) BS02 rna ? GO:0002181 ... P0ADY3 22467828
    287926 4v6r:BN (11.5) BS01 rna ? GO:0002181 ... P02413 22467828
    287927 4v6r:BO (11.5) BS01 rna ? GO:0000027 ... P0ADY7 22467828
    287928 4v6r:BO (11.5) BS02 rna ? GO:0000027 ... P0ADY7 22467828
    287929 4v6r:BO (11.5) BS03 rna ? GO:0000027 ... P0ADY7 22467828
    287930 4v6r:BP (11.5) BS01 rna ? GO:0000027 ... P0AG44 22467828
    287931 4v6r:BQ (11.5) BS01 rna ? GO:0002181 ... P0C018 22467828
    287932 4v6r:BQ (11.5) BS02 rna ? GO:0002181 ... P0C018 22467828
    287933 4v6r:BR (11.5) BS01 rna ? GO:0000027 ... P0A7K6 22467828
    287934 4v6r:BR (11.5) BS02 rna ? GO:0000027 ... P0A7K6 22467828
    287935 4v6r:BS (11.5) BS01 rna ? GO:0000027 ... P0A7L3 22467828
    287936 4v6r:BT (11.5) BS01 rna ? GO:0002181 ... P0AG48 22467828
    287937 4v6r:BU (11.5) BS01 rna ? GO:0002181 ... P61175 22467828
    287938 4v6r:BV (11.5) BS01 rna ? GO:0000027 ... P0ADZ0 22467828
    287939 4v6r:BW (11.5) BS01 rna ? GO:0000027 ... P60624 22467828
    287940 4v6r:BX (11.5) BS01 rna ? GO:0000027 ... P68919 22467828
    287941 4v6r:BX (11.5) BS02 rna ? GO:0000027 ... P68919 22467828
    287942 4v6r:BY (11.5) BS01 rna ? GO:0000027 ... P0A7L8 22467828
    287943 4v6r:BY (11.5) BS02 rna ? GO:0000027 ... P0A7L8 22467828
    287944 4v6r:BY (11.5) BS03 rna ? GO:0000027 ... P0A7L8 22467828
    287945 4v6r:BZ (11.5) BS01 rna ? GO:0000027 ... P0A7M2 22467828
    287946 4v6s:A0 (13.1) BS01 rna ? GO:0000027 ... P0A7M6 22467828
    287947 4v6s:A1 (13.1) BS01 rna ? GO:0000027 ... P0AG51 22467828
    287948 4v6s:A1 (13.1) BS02 rna ? GO:0000027 ... P0AG51 22467828
    287949 4v6s:A2 (13.1) BS01 rna ? GO:0002181 ... P0A7M9 22467828
    287950 4v6s:A2 (13.1) BS02 rna ? GO:0002181 ... P0A7M9 22467828
    287951 4v6s:A3 (13.1) BS01 rna ? GO:0000027 ... P0A7N4 22467828
    287952 4v6s:A4 (13.1) BS01 rna ? GO:0000027 ... P0A7N9 22467828
    287953 4v6s:A5 (13.1) BS01 rna ? GO:0002181 ... P0A7P5 22467828
    287954 4v6s:A6 (13.1) BS01 rna ? GO:0002181 ... P0A7Q1 22467828
    287955 4v6s:A7 (13.1) BS01 rna ? GO:0002181 ... P0A7Q6 22467828
    287956 4v6s:AC (13.1) BS01 rna ? GO:0000027 ... P0A7L0 22467828
    287957 4v6s:AD (13.1) BS01 rna ? GO:0000027 ... P60422 22467828
    287958 4v6s:AD (13.1) BS02 rna ? GO:0000027 ... P60422 22467828
    287959 4v6s:AE (13.1) BS01 rna ? GO:0000027 ... P60438 22467828
    287960 4v6s:AF (13.1) BS01 rna ? GO:0001070 ... P60723 22467828
    287961 4v6s:AG (13.1) BS01 rna ? GO:0000027 ... P62399 22467828
    287962 4v6s:AG (13.1) BS02 rna ? GO:0000027 ... P62399 22467828
    287963 4v6s:AG (13.1) BS03 rna ? GO:0000027 ... P62399 22467828
    287964 4v6s:AH (13.1) BS01 rna ? GO:0000027 ... P0AG55 22467828
    287965 4v6s:AI (13.1) BS01 rna ? GO:0002181 ... P0A7R1 22467828
    287966 4v6s:AJ (13.1) BS01 rna ? GO:0002181 ... P0A7J3 22467828
    287967 4v6s:AK (13.1) BS01 rna ? GO:0000027 ... P0A7J7 22467828
    287968 4v6s:AL (13.1) BS01 rna ? GO:0002181 ... P0AA10 22467828
    287969 4v6s:AM (13.1) BS01 rna ? GO:0002181 ... P0ADY3 22467828
    287970 4v6s:AM (13.1) BS02 rna ? GO:0002181 ... P0ADY3 22467828
    287971 4v6s:AN (13.1) BS01 rna ? GO:0002181 ... P02413 22467828
    287972 4v6s:AO (13.1) BS01 rna ? GO:0000027 ... P0ADY7 22467828
    287973 4v6s:AO (13.1) BS02 rna ? GO:0000027 ... P0ADY7 22467828
    287974 4v6s:AP (13.1) BS01 rna ? GO:0000027 ... P0AG44 22467828
    287975 4v6s:AQ (13.1) BS01 rna ? GO:0002181 ... P0C018 22467828
    287976 4v6s:AQ (13.1) BS02 rna ? GO:0002181 ... P0C018 22467828
    287977 4v6s:AR (13.1) BS01 rna ? GO:0000027 ... P0A7K6 22467828
    287978 4v6s:AR (13.1) BS02 rna ? GO:0000027 ... P0A7K6 22467828
    287979 4v6s:AS (13.1) BS01 rna ? GO:0000027 ... P0A7L3 22467828
    287980 4v6s:AT (13.1) BS01 rna ? GO:0002181 ... P0AG48 22467828
    287981 4v6s:AU (13.1) BS01 rna ? GO:0002181 ... P61175 22467828
    287982 4v6s:AV (13.1) BS01 rna ? GO:0000027 ... P0ADZ0 22467828
    287983 4v6s:AW (13.1) BS01 rna ? GO:0000027 ... P60624 22467828
    287984 4v6s:AX (13.1) BS01 rna ? GO:0000027 ... P68919 22467828
    287985 4v6s:AX (13.1) BS02 rna ? GO:0000027 ... P68919 22467828
    287986 4v6s:AY (13.1) BS01 rna ? GO:0000027 ... P0A7L8 22467828
    287987 4v6s:AY (13.1) BS02 rna ? GO:0000027 ... P0A7L8 22467828
    287988 4v6s:AY (13.1) BS03 rna ? GO:0000027 ... P0A7L8 22467828
    287989 4v6s:AZ (13.1) BS01 rna ? GO:0000027 ... P0A7M2 22467828
    287990 4v6s:BD (13.1) BS01 rna ? GO:0000028 ... P0A7V0 22467828
    287991 4v6s:BD (13.1) BS02 rna ? GO:0000028 ... P0A7V0 22467828
    287992 4v6s:BE (13.1) BS01 rna ? GO:0000028 ... P0A7V3 22467828
    287993 4v6s:BE (13.1) BS02 rna ? GO:0000028 ... P0A7V3 22467828
    287994 4v6s:BF (13.1) BS01 rna ? GO:0000028 ... P0A7V8 22467828
    287995 4v6s:BF (13.1) BS02 rna ? GO:0000028 ... P0A7V8 22467828
    287996 4v6s:BG (13.1) BS01 rna ? GO:0000028 ... P0A7W1 22467828
    287997 4v6s:BG (13.1) BS02 rna ? GO:0000028 ... P0A7W1 22467828
    287998 4v6s:BH (13.1) BS01 rna ? GO:0002181 ... P02358 22467828
    287999 4v6s:BH (13.1) BS02 rna ? GO:0002181 ... P02358 22467828
    288000 4v6s:BI (13.1) BS01 rna ? GO:0000028 ... P02359 22467828

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).