SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    289401 4v7c:BR (7.6) BS01 rna ? GO:0000027 ... P0A7K6 24324137
    289402 4v7c:BS (7.6) BS01 rna ? GO:0000027 ... P0A7L3 24324137
    289403 4v7c:BT (7.6) BS01 rna ? GO:0002181 ... P0AG48 24324137
    289404 4v7c:BU (7.6) BS01 rna ? GO:0002181 ... P61175 24324137
    289405 4v7c:BV (7.6) BS01 rna ? GO:0000027 ... P0ADZ0 24324137
    289406 4v7c:BW (7.6) BS01 rna ? GO:0000027 ... P60624 24324137
    289407 4v7c:BX (7.6) BS01 rna ? GO:0000027 ... P68919 24324137
    289408 4v7c:BX (7.6) BS02 rna ? GO:0000027 ... P68919 24324137
    289409 4v7c:BY (7.6) BS01 rna ? GO:0000027 ... P0A7L8 24324137
    289410 4v7c:BY (7.6) BS02 rna ? GO:0000027 ... P0A7L8 24324137
    289411 4v7c:BZ (7.6) BS01 rna ? GO:0000027 ... P0A7M2 24324137
    289412 4v7d:A1 (7.6) BS01 rna ? GO:0000027 ... P0A7M2 24324137
    289413 4v7d:A2 (7.6) BS01 rna ? GO:0000027 ... P0A7M6 24324137
    289414 4v7d:A3 (7.6) BS01 rna ? GO:0000027 ... P0AG51 24324137
    289415 4v7d:A3 (7.6) BS02 rna ? GO:0000027 ... P0AG51 24324137
    289416 4v7d:A4 (7.6) BS01 rna ? GO:0000027 ... P0A7N4 24324137
    289417 4v7d:A5 (7.6) BS01 rna ? GO:0000027 ... P0A7N9 24324137
    289418 4v7d:A6 (7.6) BS01 rna ? GO:0002181 ... P0A7P5 24324137
    289419 4v7d:A7 (7.6) BS01 rna ? GO:0002181 ... P0A7Q1 24324137
    289420 4v7d:A8 (7.6) BS01 rna ? GO:0002181 ... P0A7Q6 24324137
    289421 4v7d:A8 (7.6) BS02 ZN ? GO:0002181 ... P0A7Q6 24324137
    289422 4v7d:AC (7.6) BS01 rna ? GO:0000027 ... P0A7L0 24324137
    289423 4v7d:AD (7.6) BS01 rna ? GO:0000027 ... P60422 24324137
    289424 4v7d:AD (7.6) BS02 rna ? GO:0000027 ... P60422 24324137
    289425 4v7d:AE (7.6) BS01 rna ? GO:0000027 ... P60438 24324137
    289426 4v7d:AF (7.6) BS01 rna ? GO:0001070 ... P60723 24324137
    289427 4v7d:AG (7.6) BS01 rna ? GO:0000027 ... P62399 24324137
    289428 4v7d:AG (7.6) BS02 rna ? GO:0000027 ... P62399 24324137
    289429 4v7d:AH (7.6) BS01 rna ? GO:0000027 ... P0AG55 24324137
    289430 4v7d:AI (7.6) BS01 rna ? GO:0002181 ... P0A7R1 24324137
    289431 4v7d:AJ (7.6) BS01 rna ? GO:0002181 ... P0A7J3 24324137
    289432 4v7d:AK (7.6) BS01 rna ? GO:0000027 ... P0A7J7 24324137
    289433 4v7d:AM (7.6) BS01 rna ? GO:0002181 ... P0AA10 24324137
    289434 4v7d:AN (7.6) BS01 rna ? GO:0002181 ... P0ADY3 24324137
    289435 4v7d:AN (7.6) BS02 rna ? GO:0002181 ... P0ADY3 24324137
    289436 4v7d:AO (7.6) BS01 rna ? GO:0002181 ... P02413 24324137
    289437 4v7d:AP (7.6) BS01 rna ? GO:0000027 ... P0ADY7 24324137
    289438 4v7d:AP (7.6) BS02 rna ? GO:0000027 ... P0ADY7 24324137
    289439 4v7d:AQ (7.6) BS01 rna ? GO:0000027 ... P0AG44 24324137
    289440 4v7d:AR (7.6) BS01 rna ? GO:0002181 ... P0C018 24324137
    289441 4v7d:AR (7.6) BS02 rna ? GO:0002181 ... P0C018 24324137
    289442 4v7d:AS (7.6) BS01 rna ? GO:0000027 ... P0A7K6 24324137
    289443 4v7d:AS (7.6) BS02 rna ? GO:0000027 ... P0A7K6 24324137
    289444 4v7d:AT (7.6) BS01 rna ? GO:0000027 ... P0A7L3 24324137
    289445 4v7d:AU (7.6) BS01 rna ? GO:0002181 ... P0AG48 24324137
    289446 4v7d:AV (7.6) BS01 rna ? GO:0002181 ... P61175 24324137
    289447 4v7d:AW (7.6) BS01 rna ? GO:0000027 ... P0ADZ0 24324137
    289448 4v7d:AX (7.6) BS01 rna ? GO:0000027 ... P60624 24324137
    289449 4v7d:AY (7.6) BS01 rna ? GO:0000027 ... P68919 24324137
    289450 4v7d:AY (7.6) BS02 rna ? GO:0000027 ... P68919 24324137
    289451 4v7d:AZ (7.6) BS01 rna ? GO:0000027 ... P0A7L8 24324137
    289452 4v7d:AZ (7.6) BS02 rna ? GO:0000027 ... P0A7L8 24324137
    289453 4v7d:BB (7.6) BS01 rna ? GO:0000028 ... P0A7V0 24324137
    289454 4v7d:BC (7.6) BS01 rna ? GO:0000028 ... P0A7V3 24324137
    289455 4v7d:BD (7.6) BS01 rna ? GO:0000028 ... P0A7V8 24324137
    289456 4v7d:BE (7.6) BS01 rna ? GO:0000028 ... P0A7W1 24324137
    289457 4v7d:BF (7.6) BS01 rna ? GO:0002181 ... P02358 24324137
    289458 4v7d:BG (7.6) BS01 rna ? GO:0000028 ... P02359 24324137
    289459 4v7d:BH (7.6) BS01 rna ? GO:0000028 ... P0A7W7 24324137
    289460 4v7d:BI (7.6) BS01 rna ? GO:0000049 ... P0A7X3 24324137
    289461 4v7d:BJ (7.6) BS01 rna ? GO:0000049 ... P0A7R5 24324137
    289462 4v7d:BK (7.6) BS01 rna ? GO:0002181 ... P0A7R9 24324137
    289463 4v7d:BL (7.6) BS01 rna ? GO:0000049 ... P0A7S3 24324137
    289464 4v7d:BM (7.6) BS01 rna ? GO:0000049 ... P0A7S9 24324137
    289465 4v7d:BN (7.6) BS01 rna ? GO:0000028 ... P0AG59 24324137
    289466 4v7d:BO (7.6) BS01 rna ? GO:0000028 ... P0ADZ4 24324137
    289467 4v7d:BO (7.6) BS02 rna ? GO:0000028 ... P0ADZ4 24324137
    289468 4v7d:BP (7.6) BS01 rna ? GO:0000028 ... P0A7T3 24324137
    289469 4v7d:BQ (7.6) BS01 rna ? GO:0000028 ... P0AG63 24324137
    289470 4v7d:BR (7.6) BS01 rna ? GO:0002181 ... P0A7T7 24324137
    289471 4v7d:BS (7.6) BS01 rna ? GO:0000028 ... P0A7U3 24324137
    289472 4v7d:BT (7.6) BS01 rna ? GO:0000028 ... P0A7U7 24324137
    289473 4v7d:BU (7.6) BS01 rna ? GO:0000028 ... P68679 24324137
    289474 4v7d:BZ (7.6) BS01 rna 3.6.5.- GO:0003746 ... P0A6M8 24324137
    289475 4v7d:BZ (7.6) BS02 rna 3.6.5.- GO:0003746 ... P0A6M8 24324137
    289476 4v7e:BA (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289477 4v7e:BB (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289478 4v7e:BB (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289479 4v7e:BC (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289480 4v7e:BD (5.5) BS01 rna ? GO:0003723 ... Q8L804 24499919
    289481 4v7e:BE (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289482 4v7e:BF (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289483 4v7e:BG (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289484 4v7e:BH (5.5) BS01 rna ? GO:0003735 ... Q5I7K2 24499919
    289485 4v7e:BI (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289486 4v7e:BJ (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289487 4v7e:BK (5.5) BS01 rna N/A N/A N/A 24499919
    289488 4v7e:BL (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289489 4v7e:BL (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289490 4v7e:BM (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289491 4v7e:BN (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289492 4v7e:BN (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289493 4v7e:BO (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289494 4v7e:BP (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289495 4v7e:BQ (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289496 4v7e:BR (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289497 4v7e:BS (5.5) BS01 rna ? GO:0003676 ... Q8L806 24499919
    289498 4v7e:BT (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289499 4v7e:BU (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289500 4v7e:BW (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289501 4v7e:BX (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289502 4v7e:BX (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289503 4v7e:BY (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289504 4v7e:BZ (5.5) BS01 rna N/A N/A N/A 24499919
    289505 4v7e:Ba (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289506 4v7e:Bb (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289507 4v7e:Bc (5.5) BS01 rna ? GO:0003735 ... Q7X9K4 24499919
    289508 4v7e:Bd (5.5) BS01 rna ? GO:0002181 ... Q5I7K3 24499919
    289509 4v7e:Be (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289510 4v7e:Bf (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289511 4v7e:Bg (5.5) BS01 rna ? GO:0007165 ... Q8LNY6 24499919
    289512 4v7e:CA (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289513 4v7e:CA (5.5) BS02 rna N/A GO:0003723 ... N/A 24499919
    289514 4v7e:CB (5.5) BS01 rna ? GO:0003723 ... Q7X744 24499919
    289515 4v7e:CC (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289516 4v7e:CC (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289517 4v7e:CD (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289518 4v7e:CD (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289519 4v7e:CE (5.5) BS01 rna ? GO:0003735 ... Q5I7L4 24499919
    289520 4v7e:CF (5.5) BS01 rna ? GO:0000463 ... Q5I7K6 24499919
    289521 4v7e:CF (5.5) BS02 rna ? GO:0000463 ... Q5I7K6 24499919
    289522 4v7e:CG (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289523 4v7e:CG (5.5) BS02 rna N/A GO:0003723 ... N/A 24499919
    289524 4v7e:CH (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289525 4v7e:CI (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289526 4v7e:CJ (5.5) BS01 rna ? GO:0003723 ... Q5I7L2 24499919
    289527 4v7e:CJ (5.5) BS02 rna ? GO:0003723 ... Q5I7L2 24499919
    289528 4v7e:CK (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289529 4v7e:CL (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289530 4v7e:CM (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289531 4v7e:CN (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289532 4v7e:CO (5.5) BS01 rna ? GO:0003729 ... Q5I7L1 24499919
    289533 4v7e:CP (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289534 4v7e:CP (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289535 4v7e:CQ (5.5) BS01 rna ? GO:0003735 ... Q5I7L0 24499919
    289536 4v7e:CR (5.5) BS01 rna ? GO:0003723 ... Q7XY20 24499919
    289537 4v7e:CR (5.5) BS02 rna ? GO:0003723 ... Q7XY20 24499919
    289538 4v7e:CS (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289539 4v7e:CS (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289540 4v7e:CT (5.5) BS01 rna ? GO:0003735 ... F4YWL9 24499919
    289541 4v7e:CT (5.5) BS02 rna ? GO:0003735 ... F4YWL9 24499919
    289542 4v7e:CU (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289543 4v7e:CV (5.5) BS01 rna ? GO:0003735 ... Q5I7K4 24499919
    289544 4v7e:CV (5.5) BS02 rna ? GO:0003735 ... Q5I7K4 24499919
    289545 4v7e:CW (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289546 4v7e:CX (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289547 4v7e:CX (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289548 4v7e:CY (5.5) BS01 rna N/A GO:0003723 ... N/A 24499919
    289549 4v7e:CY (5.5) BS02 rna N/A GO:0003723 ... N/A 24499919
    289550 4v7e:CZ (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289551 4v7e:Ca (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289552 4v7e:Cb (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289553 4v7e:Cc (5.5) BS01 rna ? GO:0003723 ... Q5I7K9 24499919
    289554 4v7e:Cc (5.5) BS02 rna ? GO:0003723 ... Q5I7K9 24499919
    289555 4v7e:Cd (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289556 4v7e:Ce (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289557 4v7e:Cf (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289558 4v7e:Cg (5.5) BS01 rna ? GO:0003735 ... Q5I7K8 24499919
    289559 4v7e:Ch (5.5) BS01 rna ? GO:0000463 ... Q8L805 24499919
    289560 4v7e:Ch (5.5) BS02 rna ? GO:0000463 ... Q8L805 24499919
    289561 4v7e:Ci (5.5) BS01 rna ? GO:0002181 ... Q5I7L5 24499919
    289562 4v7e:Cj (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289563 4v7e:Cj (5.5) BS02 rna N/A GO:0003735 ... N/A 24499919
    289564 4v7e:Ck (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289565 4v7e:Cl (5.5) BS01 rna ? GO:0003735 ... Q5I7K7 24499919
    289566 4v7e:Cl (5.5) BS02 rna ? GO:0003735 ... Q5I7K7 24499919
    289567 4v7e:Cm (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289568 4v7e:Co (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289569 4v7e:Cp (5.5) BS01 rna ? GO:0003735 ... D8L9P6 24499919
    289570 4v7e:Cp (5.5) BS02 rna ? GO:0003735 ... D8L9P6 24499919
    289571 4v7e:Cq (5.5) BS01 rna N/A GO:0042254 ... N/A 24499919
    289572 4v7e:Cr (5.5) BS01 rna N/A GO:0003735 ... N/A 24499919
    289573 4v7e:Cz (5.5) BS01 rna ? GO:0003723 ... Q5I7L3 24499919
    289574 4v7f:B (8.7) BS01 rna ? GO:0002181 ... P0CX45 24662372
    289575 4v7f:C (8.7) BS01 rna ? GO:0000027 ... P14126 24662372
    289576 4v7f:D (8.7) BS01 rna ? GO:0002181 ... P10664 24662372
    289577 4v7f:E (8.7) BS01 rna ? GO:0000027 ... P0C0W9 24662372
    289578 4v7f:E (8.7) BS02 rna ? GO:0000027 ... P0C0W9 24662372
    289579 4v7f:J (8.7) BS01 rna ? GO:0000470 ... P26784 24662372
    289580 4v7f:K (8.7) BS01 rna ? GO:0002181 ... Q12690 24662372
    289581 4v7f:L (8.7) BS01 rna ? GO:0002181 ... P0CX41 24662372
    289582 4v7f:N (8.7) BS01 rna ? GO:0002181 ... P02406 24662372
    289583 4v7f:O (8.7) BS01 rna ? GO:0002181 ... P05748 24662372
    289584 4v7f:P (8.7) BS01 rna ? GO:0000027 ... P26321 24662372
    289585 4v7f:P (8.7) BS02 rna ? GO:0000027 ... P26321 24662372
    289586 4v7f:Q (8.7) BS01 rna ? GO:0002181 ... P0CX49 24662372
    289587 4v7f:R (8.7) BS01 rna ? GO:0002181 ... P0CX82 24662372
    289588 4v7f:T (8.7) BS01 rna ? GO:0002181 ... Q02753 24662372
    289589 4v7f:U (8.7) BS01 rna ? GO:0000448 ... P05740 24662372
    289590 4v7f:W (8.7) BS01 rna ? GO:0000027 ... P04456 24662372
    289591 4v7f:Y (8.7) BS01 rna ? GO:0002181 ... P0C2H6 24662372
    289592 4v7f:d (8.7) BS01 rna ? GO:0002181 ... P38061 24662372
    289593 4v7f:e (8.7) BS01 rna ? GO:0000027 ... P05744 24662372
    289594 4v7f:f (8.7) BS01 rna ? GO:0002181 ... P87262 24662372
    289595 4v7f:g (8.7) BS01 rna ? GO:0002181 ... P05745 24662372
    289596 4v7f:k (8.7) BS01 rna ? GO:0002181 ... P0CX25 24662372
    289597 4v7f:l (8.7) BS01 rna 3.-.-.- GO:0000055 ... Q03862 24662372
    289598 4v7f:n (8.7) BS01 rna ? GO:0000027 ... P33201 24662372
    289599 4v7f:o (8.7) BS01 rna ? GO:0000054 ... Q02892 24662372
    289600 4v7h:AB (8.9) BS01 rna N/A N/A N/A 20004163

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).