SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    290601 4v7r:DH (4.0) BS01 rna ? GO:0000470 ... P17076 21109664
    290602 4v7r:DI (4.0) BS01 rna ? GO:0002181 ... P05738 21109664
    290603 4v7r:DJ (4.0) BS01 rna ? GO:0000027 ... P41805 21109664
    290604 4v7r:DJ (4.0) BS02 rna ? GO:0000027 ... P41805 21109664
    290605 4v7r:DK (4.0) BS01 rna ? GO:0000027 ... P0C0W9 21109664
    290606 4v7r:DK (4.0) BS02 rna ? GO:0000027 ... P0C0W9 21109664
    290607 4v7r:DL (4.0) BS01 rna N/A GO:0003735 ... N/A 21109664
    290608 4v7r:DM (4.0) BS01 rna ? GO:0000027 ... P05317 21109664
    290609 4v7r:DN (4.0) BS01 rna ? GO:0000027 ... P36105 21109664
    290610 4v7r:DO (4.0) BS01 rna ? GO:0002181 ... P05748 21109664
    290611 4v7r:DO (4.0) BS02 rna ? GO:0002181 ... P05748 21109664
    290612 4v7r:DP (4.0) BS01 rna ? GO:0000470 ... P26784 21109664
    290613 4v7r:DQ (4.0) BS01 rna ? GO:0000448 ... P05740 21109664
    290614 4v7r:DQ (4.0) BS02 rna ? GO:0000448 ... P05740 21109664
    290615 4v7r:DR (4.0) BS01 rna N/A GO:0003735 ... N/A 21109664
    290616 4v7r:DS (4.0) BS01 rna N/A GO:0003723 ... N/A 21109664
    290617 4v7r:DS (4.0) BS02 rna N/A GO:0003723 ... N/A 21109664
    290618 4v7r:DT (4.0) BS01 rna ? GO:0002181 ... Q02753 21109664
    290619 4v7r:DT (4.0) BS02 OHX ? GO:0002181 ... Q02753 21109664
    290620 4v7r:DU (4.0) BS01 rna N/A GO:0003735 ... N/A 21109664
    290621 4v7r:DV (4.0) BS01 rna ? GO:0002181 ... P04449 21109664
    290622 4v7r:DW (4.0) BS01 rna ? GO:0000027 ... P04456 21109664
    290623 4v7r:DW (4.0) BS02 rna ? GO:0000027 ... P04456 21109664
    290624 4v7r:DX (4.0) BS01 rna ? GO:0002181 ... P05743 21109664
    290625 4v7r:DX (4.0) BS02 rna ? GO:0002181 ... P05743 21109664
    290626 4v7r:DY (4.0) BS01 rna ? GO:0002181 ... P02406 21109664
    290627 4v7r:DY (4.0) BS02 OHX ? GO:0002181 ... P02406 21109664
    290628 4v7r:DZ (4.0) BS01 rna ? GO:0002181 ... P14120 21109664
    290629 4v7r:Da (4.0) BS01 rna ? GO:0002181 ... P0C2H8 21109664
    290630 4v7r:Db (4.0) BS01 rna ? GO:0002181 ... P38061 21109664
    290631 4v7r:Dc (4.0) BS01 rna N/A GO:0000463 ... N/A 21109664
    290632 4v7r:Dc (4.0) BS02 rna N/A GO:0000463 ... N/A 21109664
    290633 4v7r:Dd (4.0) BS01 rna ? GO:0000448 ... P49166 21109664
    290634 4v7r:Dd (4.0) BS02 rna ? GO:0000448 ... P49166 21109664
    290635 4v7r:Dd (4.0) BS03 OHX ? GO:0000448 ... P49166 21109664
    290636 4v7r:Dd (4.0) BS04 OHX ? GO:0000448 ... P49166 21109664
    290637 4v7r:De (4.0) BS01 rna ? GO:0002181 ... P04650 21109664
    290638 4v7r:De (4.0) BS02 rna ? GO:0002181 ... P04650 21109664
    290639 4v7r:Df (4.0) BS01 rna N/A GO:0003735 ... N/A 21109664
    290640 4v7r:Dg (4.0) BS01 rna N/A GO:0003735 ... N/A 21109664
    290641 4v7r:Dg (4.0) BS02 OHX N/A GO:0003735 ... N/A 21109664
    290642 4v7r:Dh (4.0) BS01 rna N/A N/A N/A 21109664
    290643 4v7s:AB (3.2547) BS01 rna ? GO:0000028 ... P0A7V0 20876128
    290644 4v7s:AC (3.2547) BS01 rna ? GO:0003676 ... P0A7V3 20876128
    290645 4v7s:AD (3.2547) BS01 rna ? GO:0000028 ... P0A7V8 20876128
    290646 4v7s:AE (3.2547) BS01 rna ? GO:0000028 ... P0A7W1 20876128
    290647 4v7s:AF (3.2547) BS01 rna ? GO:0003735 ... P02358 20876128
    290648 4v7s:AG (3.2547) BS01 rna ? GO:0003723 ... P02359 20876128
    290649 4v7s:AH (3.2547) BS01 rna ? GO:0000028 ... P0A7W7 20876128
    290650 4v7s:AI (3.2547) BS01 rna ? GO:0000049 ... P0A7X3 20876128
    290651 4v7s:AJ (3.2547) BS01 rna ? GO:0000049 ... P0A7R5 20876128
    290652 4v7s:AK (3.2547) BS01 rna ? GO:0002181 ... P0A7R9 20876128
    290653 4v7s:AK (3.2547) BS02 rna ? GO:0002181 ... P0A7R9 20876128
    290654 4v7s:AL (3.2547) BS01 rna ? GO:0000049 ... P0A7S3 20876128
    290655 4v7s:AM (3.2547) BS01 rna ? GO:0000049 ... P0A7S9 20876128
    290656 4v7s:AN (3.2547) BS01 rna ? GO:0000028 ... P0AG59 20876128
    290657 4v7s:AO (3.2547) BS01 rna ? GO:0000028 ... P0ADZ4 20876128
    290658 4v7s:AO (3.2547) BS02 rna ? GO:0000028 ... P0ADZ4 20876128
    290659 4v7s:AP (3.2547) BS01 rna ? GO:0000028 ... P0A7T3 20876128
    290660 4v7s:AQ (3.2547) BS01 rna ? GO:0000028 ... P0AG63 20876128
    290661 4v7s:AR (3.2547) BS01 rna ? GO:0003735 ... P0A7T7 20876128
    290662 4v7s:AS (3.2547) BS01 rna ? GO:0003723 ... P0A7U3 20876128
    290663 4v7s:AT (3.2547) BS01 rna ? GO:0000028 ... P0A7U7 20876128
    290664 4v7s:AU (3.2547) BS01 rna ? GO:0003735 ... P68679 20876128
    290665 4v7s:B0 (3.2547) BS01 rna ? GO:0000027 ... P0A7N4 20876128
    290666 4v7s:B1 (3.2547) BS01 rna ? GO:0000027 ... P0A7N9 20876128
    290667 4v7s:B2 (3.2547) BS01 rna ? GO:0002181 ... P0A7P5 20876128
    290668 4v7s:B3 (3.2547) BS01 rna ? GO:0002181 ... P0A7Q1 20876128
    290669 4v7s:B4 (3.2547) BS01 rna ? GO:0002181 ... P0A7Q6 20876128
    290670 4v7s:B4 (3.2547) BS02 ZN ? GO:0002181 ... P0A7Q6 20876128
    290671 4v7s:BC (3.2547) BS01 rna ? GO:0000027 ... P60422 20876128
    290672 4v7s:BD (3.2547) BS01 rna ? GO:0000027 ... P60438 20876128
    290673 4v7s:BE (3.2547) BS01 rna ? GO:0001070 ... P60723 20876128
    290674 4v7s:BF (3.2547) BS01 rna ? GO:0000027 ... P62399 20876128
    290675 4v7s:BF (3.2547) BS02 rna ? GO:0000027 ... P62399 20876128
    290676 4v7s:BG (3.2547) BS01 rna ? GO:0000027 ... P0AG55 20876128
    290677 4v7s:BH (3.2547) BS01 rna ? GO:0002181 ... P0A7R1 20876128
    290678 4v7s:BI (3.2547) BS01 rna ? GO:0000027 ... P0A7J7 20876128
    290679 4v7s:BJ (3.2547) BS01 rna ? GO:0002181 ... P0AA10 20876128
    290680 4v7s:BK (3.2547) BS01 rna ? GO:0002181 ... P0ADY3 20876128
    290681 4v7s:BK (3.2547) BS02 rna ? GO:0002181 ... P0ADY3 20876128
    290682 4v7s:BL (3.2547) BS01 rna ? GO:0002181 ... P02413 20876128
    290683 4v7s:BM (3.2547) BS01 rna ? GO:0000027 ... P0ADY7 20876128
    290684 4v7s:BM (3.2547) BS02 rna ? GO:0000027 ... P0ADY7 20876128
    290685 4v7s:BN (3.2547) BS01 rna ? GO:0000027 ... P0AG44 20876128
    290686 4v7s:BO (3.2547) BS01 rna ? GO:0002181 ... P0C018 20876128
    290687 4v7s:BO (3.2547) BS02 rna ? GO:0002181 ... P0C018 20876128
    290688 4v7s:BP (3.2547) BS01 rna ? GO:0000027 ... P0A7K6 20876128
    290689 4v7s:BP (3.2547) BS02 rna ? GO:0000027 ... P0A7K6 20876128
    290690 4v7s:BQ (3.2547) BS01 rna ? GO:0000027 ... P0A7L3 20876128
    290691 4v7s:BR (3.2547) BS01 rna ? GO:0002181 ... P0AG48 20876128
    290692 4v7s:BS (3.2547) BS01 rna ? GO:0002181 ... P61175 20876128
    290693 4v7s:BT (3.2547) BS01 rna ? GO:0000027 ... P0ADZ0 20876128
    290694 4v7s:BU (3.2547) BS01 rna ? GO:0000027 ... P60624 20876128
    290695 4v7s:BV (3.2547) BS01 rna ? GO:0000027 ... P68919 20876128
    290696 4v7s:BV (3.2547) BS02 rna ? GO:0000027 ... P68919 20876128
    290697 4v7s:BW (3.2547) BS01 rna ? GO:0000027 ... P0A7L8 20876128
    290698 4v7s:BX (3.2547) BS01 rna ? GO:0000027 ... P0A7M2 20876128
    290699 4v7s:BY (3.2547) BS01 rna ? GO:0000027 ... P0A7M6 20876128
    290700 4v7s:BZ (3.2547) BS01 rna ? GO:0000027 ... P0AG51 20876128
    290701 4v7s:BZ (3.2547) BS02 rna ? GO:0000027 ... P0AG51 20876128
    290702 4v7s:CB (3.2547) BS01 rna ? GO:0000028 ... P0A7V0 20876128
    290703 4v7s:CB (3.2547) BS02 rna ? GO:0000028 ... P0A7V0 20876128
    290704 4v7s:CC (3.2547) BS01 rna ? GO:0003676 ... P0A7V3 20876128
    290705 4v7s:CD (3.2547) BS01 rna ? GO:0000028 ... P0A7V8 20876128
    290706 4v7s:CE (3.2547) BS01 rna ? GO:0000028 ... P0A7W1 20876128
    290707 4v7s:CF (3.2547) BS01 rna ? GO:0003735 ... P02358 20876128
    290708 4v7s:CG (3.2547) BS01 rna ? GO:0003723 ... P02359 20876128
    290709 4v7s:CH (3.2547) BS01 rna ? GO:0000028 ... P0A7W7 20876128
    290710 4v7s:CI (3.2547) BS01 rna ? GO:0000049 ... P0A7X3 20876128
    290711 4v7s:CJ (3.2547) BS01 rna ? GO:0000049 ... P0A7R5 20876128
    290712 4v7s:CK (3.2547) BS01 rna ? GO:0002181 ... P0A7R9 20876128
    290713 4v7s:CL (3.2547) BS01 rna ? GO:0000049 ... P0A7S3 20876128
    290714 4v7s:CM (3.2547) BS01 rna ? GO:0000049 ... P0A7S9 20876128
    290715 4v7s:CN (3.2547) BS01 rna ? GO:0000028 ... P0AG59 20876128
    290716 4v7s:CO (3.2547) BS01 rna ? GO:0000028 ... P0ADZ4 20876128
    290717 4v7s:CO (3.2547) BS02 rna ? GO:0000028 ... P0ADZ4 20876128
    290718 4v7s:CP (3.2547) BS01 rna ? GO:0000028 ... P0A7T3 20876128
    290719 4v7s:CQ (3.2547) BS01 rna ? GO:0000028 ... P0AG63 20876128
    290720 4v7s:CR (3.2547) BS01 rna ? GO:0003735 ... P0A7T7 20876128
    290721 4v7s:CS (3.2547) BS01 rna ? GO:0003723 ... P0A7U3 20876128
    290722 4v7s:CT (3.2547) BS01 rna ? GO:0000028 ... P0A7U7 20876128
    290723 4v7s:CU (3.2547) BS01 rna ? GO:0003735 ... P68679 20876128
    290724 4v7s:D0 (3.2547) BS01 rna ? GO:0000027 ... P0A7N4 20876128
    290725 4v7s:D1 (3.2547) BS01 rna ? GO:0000027 ... P0A7N9 20876128
    290726 4v7s:D2 (3.2547) BS01 rna ? GO:0002181 ... P0A7P5 20876128
    290727 4v7s:D3 (3.2547) BS01 rna ? GO:0002181 ... P0A7Q1 20876128
    290728 4v7s:D4 (3.2547) BS01 rna ? GO:0002181 ... P0A7Q6 20876128
    290729 4v7s:DC (3.2547) BS01 rna ? GO:0000027 ... P60422 20876128
    290730 4v7s:DD (3.2547) BS01 rna ? GO:0000027 ... P60438 20876128
    290731 4v7s:DE (3.2547) BS01 rna ? GO:0001070 ... P60723 20876128
    290732 4v7s:DF (3.2547) BS01 rna ? GO:0000027 ... P62399 20876128
    290733 4v7s:DF (3.2547) BS02 rna ? GO:0000027 ... P62399 20876128
    290734 4v7s:DG (3.2547) BS01 rna ? GO:0000027 ... P0AG55 20876128
    290735 4v7s:DH (3.2547) BS01 rna ? GO:0002181 ... P0A7R1 20876128
    290736 4v7s:DI (3.2547) BS01 rna ? GO:0000027 ... P0A7J7 20876128
    290737 4v7s:DJ (3.2547) BS01 rna ? GO:0002181 ... P0AA10 20876128
    290738 4v7s:DK (3.2547) BS01 rna ? GO:0002181 ... P0ADY3 20876128
    290739 4v7s:DK (3.2547) BS02 rna ? GO:0002181 ... P0ADY3 20876128
    290740 4v7s:DL (3.2547) BS01 rna ? GO:0002181 ... P02413 20876128
    290741 4v7s:DM (3.2547) BS01 rna ? GO:0000027 ... P0ADY7 20876128
    290742 4v7s:DM (3.2547) BS02 rna ? GO:0000027 ... P0ADY7 20876128
    290743 4v7s:DN (3.2547) BS01 rna ? GO:0000027 ... P0AG44 20876128
    290744 4v7s:DO (3.2547) BS01 rna ? GO:0002181 ... P0C018 20876128
    290745 4v7s:DO (3.2547) BS02 rna ? GO:0002181 ... P0C018 20876128
    290746 4v7s:DP (3.2547) BS01 rna ? GO:0000027 ... P0A7K6 20876128
    290747 4v7s:DP (3.2547) BS02 rna ? GO:0000027 ... P0A7K6 20876128
    290748 4v7s:DQ (3.2547) BS01 rna ? GO:0000027 ... P0A7L3 20876128
    290749 4v7s:DR (3.2547) BS01 rna ? GO:0002181 ... P0AG48 20876128
    290750 4v7s:DS (3.2547) BS01 rna ? GO:0002181 ... P61175 20876128
    290751 4v7s:DT (3.2547) BS01 rna ? GO:0000027 ... P0ADZ0 20876128
    290752 4v7s:DU (3.2547) BS01 rna ? GO:0000027 ... P60624 20876128
    290753 4v7s:DV (3.2547) BS01 rna ? GO:0000027 ... P68919 20876128
    290754 4v7s:DV (3.2547) BS02 rna ? GO:0000027 ... P68919 20876128
    290755 4v7s:DW (3.2547) BS01 rna ? GO:0000027 ... P0A7L8 20876128
    290756 4v7s:DW (3.2547) BS02 rna ? GO:0000027 ... P0A7L8 20876128
    290757 4v7s:DX (3.2547) BS01 rna ? GO:0000027 ... P0A7M2 20876128
    290758 4v7s:DY (3.2547) BS01 rna ? GO:0000027 ... P0A7M6 20876128
    290759 4v7s:DZ (3.2547) BS01 rna ? GO:0000027 ... P0AG51 20876128
    290760 4v7s:DZ (3.2547) BS02 rna ? GO:0000027 ... P0AG51 20876128
    290761 4v7t:AB (3.1942) BS01 rna ? GO:0000028 ... P0A7V0 20876128
    290762 4v7t:AC (3.1942) BS01 rna ? GO:0003676 ... P0A7V3 20876128
    290763 4v7t:AD (3.1942) BS01 rna ? GO:0000028 ... P0A7V8 20876128
    290764 4v7t:AE (3.1942) BS01 rna ? GO:0000028 ... P0A7W1 20876128
    290765 4v7t:AF (3.1942) BS01 rna ? GO:0003735 ... P02358 20876128
    290766 4v7t:AG (3.1942) BS01 rna ? GO:0003723 ... P02359 20876128
    290767 4v7t:AH (3.1942) BS01 rna ? GO:0000028 ... P0A7W7 20876128
    290768 4v7t:AI (3.1942) BS01 rna ? GO:0000049 ... P0A7X3 20876128
    290769 4v7t:AJ (3.1942) BS01 rna ? GO:0000049 ... P0A7R5 20876128
    290770 4v7t:AK (3.1942) BS01 rna ? GO:0002181 ... P0A7R9 20876128
    290771 4v7t:AK (3.1942) BS02 rna ? GO:0002181 ... P0A7R9 20876128
    290772 4v7t:AL (3.1942) BS01 rna ? GO:0000049 ... P0A7S3 20876128
    290773 4v7t:AM (3.1942) BS01 rna ? GO:0000049 ... P0A7S9 20876128
    290774 4v7t:AN (3.1942) BS01 rna ? GO:0000028 ... P0AG59 20876128
    290775 4v7t:AO (3.1942) BS01 rna ? GO:0000028 ... P0ADZ4 20876128
    290776 4v7t:AO (3.1942) BS02 rna ? GO:0000028 ... P0ADZ4 20876128
    290777 4v7t:AP (3.1942) BS01 rna ? GO:0000028 ... P0A7T3 20876128
    290778 4v7t:AQ (3.1942) BS01 rna ? GO:0000028 ... P0AG63 20876128
    290779 4v7t:AR (3.1942) BS01 rna ? GO:0003735 ... P0A7T7 20876128
    290780 4v7t:AS (3.1942) BS01 rna ? GO:0003723 ... P0A7U3 20876128
    290781 4v7t:AT (3.1942) BS01 rna ? GO:0000028 ... P0A7U7 20876128
    290782 4v7t:AU (3.1942) BS01 rna ? GO:0003735 ... P68679 20876128
    290783 4v7t:B0 (3.1942) BS01 rna ? GO:0000027 ... P0A7N4 20876128
    290784 4v7t:B1 (3.1942) BS01 rna ? GO:0000027 ... P0A7N9 20876128
    290785 4v7t:B2 (3.1942) BS01 rna ? GO:0002181 ... P0A7P5 20876128
    290786 4v7t:B3 (3.1942) BS01 rna ? GO:0002181 ... P0A7Q1 20876128
    290787 4v7t:B4 (3.1942) BS01 rna ? GO:0002181 ... P0A7Q6 20876128
    290788 4v7t:B4 (3.1942) BS02 ZN ? GO:0002181 ... P0A7Q6 20876128
    290789 4v7t:BC (3.1942) BS01 rna ? GO:0000027 ... P60422 20876128
    290790 4v7t:BD (3.1942) BS01 rna ? GO:0000027 ... P60438 20876128
    290791 4v7t:BE (3.1942) BS01 rna ? GO:0001070 ... P60723 20876128
    290792 4v7t:BF (3.1942) BS01 rna ? GO:0000027 ... P62399 20876128
    290793 4v7t:BF (3.1942) BS02 rna ? GO:0000027 ... P62399 20876128
    290794 4v7t:BG (3.1942) BS01 rna ? GO:0000027 ... P0AG55 20876128
    290795 4v7t:BH (3.1942) BS01 rna ? GO:0002181 ... P0A7R1 20876128
    290796 4v7t:BI (3.1942) BS01 rna ? GO:0000027 ... P0A7J7 20876128
    290797 4v7t:BJ (3.1942) BS01 rna ? GO:0002181 ... P0AA10 20876128
    290798 4v7t:BK (3.1942) BS01 rna ? GO:0002181 ... P0ADY3 20876128
    290799 4v7t:BK (3.1942) BS02 rna ? GO:0002181 ... P0ADY3 20876128
    290800 4v7t:BL (3.1942) BS01 rna ? GO:0002181 ... P02413 20876128

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).