SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    296001 4v94:l (3.8) BS01 ADP ? GO:0005524 ... P39078 22503819
    296002 4v94:l (3.8) BS02 BEF ? GO:0005524 ... P39078 22503819
    296003 4v94:m (3.8) BS01 MG ? GO:0005524 ... P40413 22503819
    296004 4v94:m (3.8) BS02 ADP ? GO:0005524 ... P40413 22503819
    296005 4v94:m (3.8) BS03 BEF ? GO:0005524 ... P40413 22503819
    296006 4v94:n (3.8) BS01 MG ? GO:0005524 ... P39079 22503819
    296007 4v94:n (3.8) BS02 ADP ? GO:0005524 ... P39079 22503819
    296008 4v94:n (3.8) BS03 BEF ? GO:0005524 ... P39079 22503819
    296009 4v94:o (3.8) BS01 ADP ? GO:0005524 ... P42943 22503819
    296010 4v94:o (3.8) BS02 BEF ? GO:0005524 ... P42943 22503819
    296011 4v94:p (3.8) BS01 ADP ? GO:0005524 ... P47079 22503819
    296012 4v94:p (3.8) BS02 BEF ? GO:0005524 ... P47079 22503819
    296013 4v95:AB (3.2) BS01 rna ? GO:0003735 ... P80371 22422986
    296014 4v95:AC (3.2) BS01 rna ? GO:0003676 ... P80372 22422986
    296015 4v95:AD (3.2) BS01 rna ? GO:0003723 ... P80373 22422986
    296016 4v95:AD (3.2) BS02 ZN ? GO:0003723 ... P80373 22422986
    296017 4v95:AE (3.2) BS01 rna ? GO:0003723 ... Q5SHQ5 22422986
    296018 4v95:AF (3.2) BS01 rna ? GO:0003735 ... Q5SLP8 22422986
    296019 4v95:AG (3.2) BS01 rna ? GO:0000049 ... P17291 22422986
    296020 4v95:AH (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296021 4v95:AI (3.2) BS01 rna ? GO:0000049 ... P80374 22422986
    296022 4v95:AJ (3.2) BS01 rna ? GO:0000049 ... Q5SHN7 22422986
    296023 4v95:AK (3.2) BS01 rna ? GO:0003735 ... P80376 22422986
    296024 4v95:AK (3.2) BS02 MG ? GO:0003735 ... P80376 22422986
    296025 4v95:AL (3.2) BS01 rna ? GO:0000049 ... Q5SHN3 22422986
    296026 4v95:AM (3.2) BS01 rna ? GO:0000049 ... P80377 22422986
    296027 4v95:AM (3.2) BS02 rna ? GO:0000049 ... P80377 22422986
    296028 4v95:AN (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296029 4v95:AN (3.2) BS02 ZN N/A GO:0003735 ... N/A 22422986
    296030 4v95:AO (3.2) BS01 rna ? GO:0003735 ... Q5SJ76 22422986
    296031 4v95:AO (3.2) BS02 rna ? GO:0003735 ... Q5SJ76 22422986
    296032 4v95:AP (3.2) BS01 rna ? GO:0003735 ... Q5SJH3 22422986
    296033 4v95:AQ (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296034 4v95:AQ (3.2) BS02 MG N/A GO:0003735 ... N/A 22422986
    296035 4v95:AR (3.2) BS01 rna ? GO:0003735 ... Q5SLQ0 22422986
    296036 4v95:AS (3.2) BS01 rna ? GO:0000028 ... Q5SHP2 22422986
    296037 4v95:AT (3.2) BS01 rna ? GO:0003723 ... P80380 22422986
    296038 4v95:AY (3.2) BS01 rna 3.1.1.29 GO:0003747 ... P40711 22422986
    296039 4v95:AY (3.2) BS02 rna 3.1.1.29 GO:0003747 ... P40711 22422986
    296040 4v95:AY (3.2) BS03 rna 3.1.1.29 GO:0003747 ... P40711 22422986
    296041 4v95:B0 (3.2) BS01 rna ? GO:0003735 ... P60493 22422986
    296042 4v95:B0 (3.2) BS02 rna ? GO:0003735 ... P60493 22422986
    296043 4v95:B0 (3.2) BS03 MG ? GO:0003735 ... P60493 22422986
    296044 4v95:B1 (3.2) BS01 rna ? GO:0003735 ... P60494 22422986
    296045 4v95:B2 (3.2) BS01 rna ? GO:0003735 ... Q5SHP6 22422986
    296046 4v95:B3 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ6 22422986
    296047 4v95:B3 (3.2) BS02 rna ? GO:0003735 ... Q5SHQ6 22422986
    296048 4v95:B3 (3.2) BS03 MG ? GO:0003735 ... Q5SHQ6 22422986
    296049 4v95:B4 (3.2) BS01 rna ? GO:0003735 ... Q5SJE1 22422986
    296050 4v95:B4 (3.2) BS02 ZN ? GO:0003735 ... Q5SJE1 22422986
    296051 4v95:B5 (3.2) BS01 rna ? GO:0003735 ... P80339 22422986
    296052 4v95:B5 (3.2) BS02 ZN ? GO:0003735 ... P80339 22422986
    296053 4v95:B6 (3.2) BS01 rna ? GO:0000049 ... P35871 22422986
    296054 4v95:B6 (3.2) BS02 ZN ? GO:0000049 ... P35871 22422986
    296055 4v95:B7 (3.2) BS01 rna ? GO:0003735 ... P80340 22422986
    296056 4v95:B8 (3.2) BS01 rna ? GO:0003735 ... Q5SKU1 22422986
    296057 4v95:B9 (3.2) BS01 rna ? GO:0003735 ... Q5SHR2 22422986
    296058 4v95:B9 (3.2) BS02 ZN ? GO:0003735 ... Q5SHR2 22422986
    296059 4v95:BD (3.2) BS01 rna ? GO:0002181 ... P60405 22422986
    296060 4v95:BD (3.2) BS02 rna ? GO:0002181 ... P60405 22422986
    296061 4v95:BD (3.2) BS03 MG ? GO:0002181 ... P60405 22422986
    296062 4v95:BE (3.2) BS01 rna ? GO:0003735 ... Q5SHN8 22422986
    296063 4v95:BE (3.2) BS02 MG ? GO:0003735 ... Q5SHN8 22422986
    296064 4v95:BF (3.2) BS01 rna ? GO:0003735 ... Q5SHN9 22422986
    296065 4v95:BF (3.2) BS02 MG ? GO:0003735 ... Q5SHN9 22422986
    296066 4v95:BF (3.2) BS03 MG ? GO:0003735 ... Q5SHN9 22422986
    296067 4v95:BF (3.2) BS04 MG ? GO:0003735 ... Q5SHN9 22422986
    296068 4v95:BG (3.2) BS01 rna ? GO:0000049 ... Q5SHQ0 22422986
    296069 4v95:BG (3.2) BS02 rna ? GO:0000049 ... Q5SHQ0 22422986
    296070 4v95:BG (3.2) BS03 rna ? GO:0000049 ... Q5SHQ0 22422986
    296071 4v95:BG (3.2) BS04 MG ? GO:0000049 ... Q5SHQ0 22422986
    296072 4v95:BH (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296073 4v95:BI (3.2) BS01 rna ? GO:0003735 ... Q5SLQ1 22422986
    296074 4v95:BN (3.2) BS01 rna ? GO:0003729 ... P60488 22422986
    296075 4v95:BO (3.2) BS01 rna ? GO:0003735 ... Q5SHP8 22422986
    296076 4v95:BO (3.2) BS02 rna ? GO:0003735 ... Q5SHP8 22422986
    296077 4v95:BO (3.2) BS03 MG ? GO:0003735 ... Q5SHP8 22422986
    296078 4v95:BP (3.2) BS01 rna ? GO:0003735 ... Q5SHQ7 22422986
    296079 4v95:BQ (3.2) BS01 rna ? GO:0000049 ... P60489 22422986
    296080 4v95:BQ (3.2) BS02 rna ? GO:0000049 ... P60489 22422986
    296081 4v95:BR (3.2) BS01 rna ? GO:0003735 ... Q9Z9H5 22422986
    296082 4v95:BS (3.2) BS01 rna ? GO:0003735 ... Q5SHQ4 22422986
    296083 4v95:BS (3.2) BS02 rna ? GO:0003735 ... Q5SHQ4 22422986
    296084 4v95:BT (3.2) BS01 rna ? GO:0003735 ... P60490 22422986
    296085 4v95:BT (3.2) BS02 rna ? GO:0003735 ... P60490 22422986
    296086 4v95:BU (3.2) BS01 rna ? GO:0000027 ... P60491 22422986
    296087 4v95:BU (3.2) BS02 MG ? GO:0000027 ... P60491 22422986
    296088 4v95:BV (3.2) BS01 rna ? GO:0003723 ... P60492 22422986
    296089 4v95:BV (3.2) BS02 MG ? GO:0003723 ... P60492 22422986
    296090 4v95:BW (3.2) BS01 rna ? GO:0003735 ... Q5SHP3 22422986
    296091 4v95:BX (3.2) BS01 rna ? GO:0003735 ... Q5SHP0 22422986
    296092 4v95:BY (3.2) BS01 rna ? GO:0003723 ... Q5SHP9 22422986
    296093 4v95:BY (3.2) BS02 ZN ? GO:0003723 ... Q5SHP9 22422986
    296094 4v95:BZ (3.2) BS01 rna ? GO:0003723 ... Q5SHZ1 22422986
    296095 4v95:BZ (3.2) BS02 rna ? GO:0003723 ... Q5SHZ1 22422986
    296096 4v95:CB (3.2) BS01 rna ? GO:0003735 ... P80371 22422986
    296097 4v95:CC (3.2) BS01 rna ? GO:0003676 ... P80372 22422986
    296098 4v95:CD (3.2) BS01 rna ? GO:0003723 ... P80373 22422986
    296099 4v95:CE (3.2) BS01 rna ? GO:0003723 ... Q5SHQ5 22422986
    296100 4v95:CF (3.2) BS01 rna ? GO:0003735 ... Q5SLP8 22422986
    296101 4v95:CG (3.2) BS01 rna ? GO:0000049 ... P17291 22422986
    296102 4v95:CG (3.2) BS02 rna ? GO:0000049 ... P17291 22422986
    296103 4v95:CH (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296104 4v95:CI (3.2) BS01 rna ? GO:0000049 ... P80374 22422986
    296105 4v95:CJ (3.2) BS01 rna ? GO:0000049 ... Q5SHN7 22422986
    296106 4v95:CK (3.2) BS01 rna ? GO:0003735 ... P80376 22422986
    296107 4v95:CK (3.2) BS02 MG ? GO:0003735 ... P80376 22422986
    296108 4v95:CL (3.2) BS01 rna ? GO:0000049 ... Q5SHN3 22422986
    296109 4v95:CM (3.2) BS01 rna ? GO:0000049 ... P80377 22422986
    296110 4v95:CN (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296111 4v95:CN (3.2) BS02 ZN N/A GO:0003735 ... N/A 22422986
    296112 4v95:CO (3.2) BS01 rna ? GO:0003735 ... Q5SJ76 22422986
    296113 4v95:CO (3.2) BS02 rna ? GO:0003735 ... Q5SJ76 22422986
    296114 4v95:CP (3.2) BS01 rna ? GO:0003735 ... Q5SJH3 22422986
    296115 4v95:CQ (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296116 4v95:CR (3.2) BS01 rna ? GO:0003735 ... Q5SLQ0 22422986
    296117 4v95:CS (3.2) BS01 rna ? GO:0000028 ... Q5SHP2 22422986
    296118 4v95:CT (3.2) BS01 rna ? GO:0003723 ... P80380 22422986
    296119 4v95:D0 (3.2) BS01 rna ? GO:0003735 ... P60493 22422986
    296120 4v95:D0 (3.2) BS02 rna ? GO:0003735 ... P60493 22422986
    296121 4v95:D1 (3.2) BS01 rna ? GO:0003735 ... P60494 22422986
    296122 4v95:D2 (3.2) BS01 rna ? GO:0003735 ... Q5SHP6 22422986
    296123 4v95:D3 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ6 22422986
    296124 4v95:D3 (3.2) BS02 rna ? GO:0003735 ... Q5SHQ6 22422986
    296125 4v95:D4 (3.2) BS01 rna ? GO:0003735 ... Q5SJE1 22422986
    296126 4v95:D4 (3.2) BS02 ZN ? GO:0003735 ... Q5SJE1 22422986
    296127 4v95:D5 (3.2) BS01 rna ? GO:0003735 ... P80339 22422986
    296128 4v95:D5 (3.2) BS02 ZN ? GO:0003735 ... P80339 22422986
    296129 4v95:D6 (3.2) BS01 rna ? GO:0000049 ... P35871 22422986
    296130 4v95:D6 (3.2) BS02 ZN ? GO:0000049 ... P35871 22422986
    296131 4v95:D6 (3.2) BS03 MG ? GO:0000049 ... P35871 22422986
    296132 4v95:D7 (3.2) BS01 rna ? GO:0003735 ... P80340 22422986
    296133 4v95:D7 (3.2) BS02 MG ? GO:0003735 ... P80340 22422986
    296134 4v95:D8 (3.2) BS01 rna ? GO:0003735 ... Q5SKU1 22422986
    296135 4v95:D9 (3.2) BS01 rna ? GO:0003735 ... Q5SHR2 22422986
    296136 4v95:D9 (3.2) BS02 ZN ? GO:0003735 ... Q5SHR2 22422986
    296137 4v95:DD (3.2) BS01 rna ? GO:0002181 ... P60405 22422986
    296138 4v95:DD (3.2) BS02 rna ? GO:0002181 ... P60405 22422986
    296139 4v95:DD (3.2) BS03 MG ? GO:0002181 ... P60405 22422986
    296140 4v95:DD (3.2) BS04 MG ? GO:0002181 ... P60405 22422986
    296141 4v95:DD (3.2) BS05 MG ? GO:0002181 ... P60405 22422986
    296142 4v95:DE (3.2) BS01 rna ? GO:0003735 ... Q5SHN8 22422986
    296143 4v95:DE (3.2) BS02 MG ? GO:0003735 ... Q5SHN8 22422986
    296144 4v95:DF (3.2) BS01 rna ? GO:0003735 ... Q5SHN9 22422986
    296145 4v95:DG (3.2) BS01 rna ? GO:0000049 ... Q5SHQ0 22422986
    296146 4v95:DG (3.2) BS02 rna ? GO:0000049 ... Q5SHQ0 22422986
    296147 4v95:DG (3.2) BS03 rna ? GO:0000049 ... Q5SHQ0 22422986
    296148 4v95:DH (3.2) BS01 rna N/A GO:0003735 ... N/A 22422986
    296149 4v95:DI (3.2) BS01 rna ? GO:0003735 ... Q5SLQ1 22422986
    296150 4v95:DN (3.2) BS01 rna ? GO:0003729 ... P60488 22422986
    296151 4v95:DO (3.2) BS01 rna ? GO:0003735 ... Q5SHP8 22422986
    296152 4v95:DO (3.2) BS02 rna ? GO:0003735 ... Q5SHP8 22422986
    296153 4v95:DP (3.2) BS01 rna ? GO:0003735 ... Q5SHQ7 22422986
    296154 4v95:DP (3.2) BS02 MG ? GO:0003735 ... Q5SHQ7 22422986
    296155 4v95:DQ (3.2) BS01 rna ? GO:0000049 ... P60489 22422986
    296156 4v95:DQ (3.2) BS02 rna ? GO:0000049 ... P60489 22422986
    296157 4v95:DR (3.2) BS01 rna ? GO:0003735 ... Q9Z9H5 22422986
    296158 4v95:DS (3.2) BS01 rna ? GO:0003735 ... Q5SHQ4 22422986
    296159 4v95:DS (3.2) BS02 rna ? GO:0003735 ... Q5SHQ4 22422986
    296160 4v95:DT (3.2) BS01 rna ? GO:0003735 ... P60490 22422986
    296161 4v95:DT (3.2) BS02 rna ? GO:0003735 ... P60490 22422986
    296162 4v95:DU (3.2) BS01 rna ? GO:0000027 ... P60491 22422986
    296163 4v95:DV (3.2) BS01 rna ? GO:0003723 ... P60492 22422986
    296164 4v95:DV (3.2) BS02 MG ? GO:0003723 ... P60492 22422986
    296165 4v95:DW (3.2) BS01 rna ? GO:0003735 ... Q5SHP3 22422986
    296166 4v95:DX (3.2) BS01 rna ? GO:0003735 ... Q5SHP0 22422986
    296167 4v95:DY (3.2) BS01 rna ? GO:0003723 ... Q5SHP9 22422986
    296168 4v95:DY (3.2) BS02 ZN ? GO:0003723 ... Q5SHP9 22422986
    296169 4v95:DZ (3.2) BS01 rna ? GO:0003723 ... Q5SHZ1 22422986
    296170 4v95:DZ (3.2) BS02 rna ? GO:0003723 ... Q5SHZ1 22422986
    296171 4v97:AB (3.516) BS01 rna ? GO:0003735 ... P80371 23630274
    296172 4v97:AC (3.516) BS01 rna ? GO:0003676 ... P80372 23630274
    296173 4v97:AD (3.516) BS01 rna ? GO:0003723 ... P80373 23630274
    296174 4v97:AD (3.516) BS02 ZN ? GO:0003723 ... P80373 23630274
    296175 4v97:AE (3.516) BS01 rna ? GO:0003723 ... Q5SHQ5 23630274
    296176 4v97:AF (3.516) BS01 rna ? GO:0003735 ... Q5SLP8 23630274
    296177 4v97:AG (3.516) BS01 rna ? GO:0000049 ... P17291 23630274
    296178 4v97:AG (3.516) BS02 rna ? GO:0000049 ... P17291 23630274
    296179 4v97:AG (3.516) BS03 rna ? GO:0000049 ... P17291 23630274
    296180 4v97:AH (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296181 4v97:AI (3.516) BS01 rna ? GO:0000049 ... P80374 23630274
    296182 4v97:AJ (3.516) BS01 rna ? GO:0000049 ... Q5SHN7 23630274
    296183 4v97:AJ (3.516) BS02 rna ? GO:0000049 ... Q5SHN7 23630274
    296184 4v97:AK (3.516) BS01 rna ? GO:0003735 ... P80376 23630274
    296185 4v97:AL (3.516) BS01 rna ? GO:0000049 ... Q5SHN3 23630274
    296186 4v97:AM (3.516) BS01 rna ? GO:0000049 ... P80377 23630274
    296187 4v97:AM (3.516) BS02 rna ? GO:0000049 ... P80377 23630274
    296188 4v97:AM (3.516) BS03 rna ? GO:0000049 ... P80377 23630274
    296189 4v97:AN (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296190 4v97:AN (3.516) BS02 ZN N/A GO:0003735 ... N/A 23630274
    296191 4v97:AO (3.516) BS01 rna ? GO:0003735 ... Q5SJ76 23630274
    296192 4v97:AO (3.516) BS02 rna ? GO:0003735 ... Q5SJ76 23630274
    296193 4v97:AP (3.516) BS01 rna ? GO:0003735 ... Q5SJH3 23630274
    296194 4v97:AQ (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296195 4v97:AR (3.516) BS01 rna ? GO:0003735 ... Q5SLQ0 23630274
    296196 4v97:AS (3.516) BS01 rna ? GO:0000028 ... Q5SHP2 23630274
    296197 4v97:AT (3.516) BS01 rna ? GO:0003723 ... P80380 23630274
    296198 4v97:B0 (3.516) BS01 rna ? GO:0003735 ... P60493 23630274
    296199 4v97:B0 (3.516) BS02 rna ? GO:0003735 ... P60493 23630274
    296200 4v97:B0 (3.516) BS03 rna ? GO:0003735 ... P60493 23630274

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).