SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    296201 4v97:B1 (3.516) BS01 rna ? GO:0003735 ... P60494 23630274
    296202 4v97:B2 (3.516) BS01 rna ? GO:0003735 ... Q5SHP6 23630274
    296203 4v97:B3 (3.516) BS01 rna ? GO:0003735 ... Q5SHQ6 23630274
    296204 4v97:B3 (3.516) BS02 rna ? GO:0003735 ... Q5SHQ6 23630274
    296205 4v97:B5 (3.516) BS01 rna ? GO:0003735 ... P80339 23630274
    296206 4v97:B6 (3.516) BS01 rna ? GO:0000049 ... P35871 23630274
    296207 4v97:B7 (3.516) BS01 rna ? GO:0003735 ... P80340 23630274
    296208 4v97:B8 (3.516) BS01 rna ? GO:0003735 ... Q5SKU1 23630274
    296209 4v97:B9 (3.516) BS01 rna ? GO:0003735 ... Q5SHR2 23630274
    296210 4v97:BC (3.516) BS01 rna ? GO:0000049 ... Q5SLP7 23630274
    296211 4v97:BC (3.516) BS02 rna ? GO:0000049 ... Q5SLP7 23630274
    296212 4v97:BD (3.516) BS01 rna ? GO:0002181 ... P60405 23630274
    296213 4v97:BD (3.516) BS02 rna ? GO:0002181 ... P60405 23630274
    296214 4v97:BD (3.516) BS03 MG ? GO:0002181 ... P60405 23630274
    296215 4v97:BD (3.516) BS04 MG ? GO:0002181 ... P60405 23630274
    296216 4v97:BE (3.516) BS01 rna ? GO:0003735 ... Q5SHN8 23630274
    296217 4v97:BE (3.516) BS02 MG ? GO:0003735 ... Q5SHN8 23630274
    296218 4v97:BF (3.516) BS01 rna ? GO:0003735 ... Q5SHN9 23630274
    296219 4v97:BF (3.516) BS02 MG ? GO:0003735 ... Q5SHN9 23630274
    296220 4v97:BG (3.516) BS01 rna ? GO:0000049 ... Q5SHQ0 23630274
    296221 4v97:BG (3.516) BS02 rna ? GO:0000049 ... Q5SHQ0 23630274
    296222 4v97:BG (3.516) BS03 rna ? GO:0000049 ... Q5SHQ0 23630274
    296223 4v97:BH (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296224 4v97:BI (3.516) BS01 rna ? GO:0003735 ... Q5SLQ1 23630274
    296225 4v97:BN (3.516) BS01 rna ? GO:0003729 ... P60488 23630274
    296226 4v97:BN (3.516) BS02 MG ? GO:0003729 ... P60488 23630274
    296227 4v97:BO (3.516) BS01 rna ? GO:0003735 ... Q5SHP8 23630274
    296228 4v97:BO (3.516) BS02 rna ? GO:0003735 ... Q5SHP8 23630274
    296229 4v97:BP (3.516) BS01 rna ? GO:0003735 ... Q5SHQ7 23630274
    296230 4v97:BQ (3.516) BS01 rna ? GO:0000049 ... P60489 23630274
    296231 4v97:BQ (3.516) BS02 rna ? GO:0000049 ... P60489 23630274
    296232 4v97:BR (3.516) BS01 rna ? GO:0003735 ... Q9Z9H5 23630274
    296233 4v97:BS (3.516) BS01 rna ? GO:0003735 ... Q5SHQ4 23630274
    296234 4v97:BS (3.516) BS02 rna ? GO:0003735 ... Q5SHQ4 23630274
    296235 4v97:BT (3.516) BS01 rna ? GO:0003735 ... P60490 23630274
    296236 4v97:BT (3.516) BS02 rna ? GO:0003735 ... P60490 23630274
    296237 4v97:BU (3.516) BS01 rna ? GO:0000027 ... P60491 23630274
    296238 4v97:BU (3.516) BS02 MG ? GO:0000027 ... P60491 23630274
    296239 4v97:BV (3.516) BS01 rna ? GO:0003723 ... P60492 23630274
    296240 4v97:BW (3.516) BS01 rna ? GO:0003735 ... Q5SHP3 23630274
    296241 4v97:BX (3.516) BS01 rna ? GO:0003735 ... Q5SHP0 23630274
    296242 4v97:BY (3.516) BS01 rna ? GO:0003723 ... Q5SHP9 23630274
    296243 4v97:BZ (3.516) BS01 rna ? GO:0003723 ... Q5SHZ1 23630274
    296244 4v97:BZ (3.516) BS02 rna ? GO:0003723 ... Q5SHZ1 23630274
    296245 4v97:CB (3.516) BS01 rna ? GO:0003735 ... P80371 23630274
    296246 4v97:CC (3.516) BS01 rna ? GO:0003676 ... P80372 23630274
    296247 4v97:CD (3.516) BS01 rna ? GO:0003723 ... P80373 23630274
    296248 4v97:CD (3.516) BS02 ZN ? GO:0003723 ... P80373 23630274
    296249 4v97:CE (3.516) BS01 rna ? GO:0003723 ... Q5SHQ5 23630274
    296250 4v97:CF (3.516) BS01 rna ? GO:0003735 ... Q5SLP8 23630274
    296251 4v97:CG (3.516) BS01 rna ? GO:0000049 ... P17291 23630274
    296252 4v97:CG (3.516) BS02 rna ? GO:0000049 ... P17291 23630274
    296253 4v97:CH (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296254 4v97:CI (3.516) BS01 rna ? GO:0000049 ... P80374 23630274
    296255 4v97:CI (3.516) BS02 rna ? GO:0000049 ... P80374 23630274
    296256 4v97:CJ (3.516) BS01 rna ? GO:0000049 ... Q5SHN7 23630274
    296257 4v97:CK (3.516) BS01 rna ? GO:0003735 ... P80376 23630274
    296258 4v97:CL (3.516) BS01 rna ? GO:0000049 ... Q5SHN3 23630274
    296259 4v97:CM (3.516) BS01 rna ? GO:0000049 ... P80377 23630274
    296260 4v97:CM (3.516) BS02 rna ? GO:0000049 ... P80377 23630274
    296261 4v97:CM (3.516) BS03 rna ? GO:0000049 ... P80377 23630274
    296262 4v97:CN (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296263 4v97:CN (3.516) BS02 ZN N/A GO:0003735 ... N/A 23630274
    296264 4v97:CO (3.516) BS01 rna ? GO:0003735 ... Q5SJ76 23630274
    296265 4v97:CO (3.516) BS02 rna ? GO:0003735 ... Q5SJ76 23630274
    296266 4v97:CP (3.516) BS01 rna ? GO:0003735 ... Q5SJH3 23630274
    296267 4v97:CQ (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296268 4v97:CR (3.516) BS01 rna ? GO:0003735 ... Q5SLQ0 23630274
    296269 4v97:CS (3.516) BS01 rna ? GO:0000028 ... Q5SHP2 23630274
    296270 4v97:CT (3.516) BS01 rna ? GO:0003723 ... P80380 23630274
    296271 4v97:D0 (3.516) BS01 rna ? GO:0003735 ... P60493 23630274
    296272 4v97:D0 (3.516) BS02 rna ? GO:0003735 ... P60493 23630274
    296273 4v97:D0 (3.516) BS03 rna ? GO:0003735 ... P60493 23630274
    296274 4v97:D1 (3.516) BS01 rna ? GO:0003735 ... P60494 23630274
    296275 4v97:D2 (3.516) BS01 rna ? GO:0003735 ... Q5SHP6 23630274
    296276 4v97:D3 (3.516) BS01 rna ? GO:0003735 ... Q5SHQ6 23630274
    296277 4v97:D3 (3.516) BS02 rna ? GO:0003735 ... Q5SHQ6 23630274
    296278 4v97:D4 (3.516) BS01 rna ? GO:0003735 ... Q5SJE1 23630274
    296279 4v97:D5 (3.516) BS01 rna ? GO:0003735 ... P80339 23630274
    296280 4v97:D6 (3.516) BS01 rna ? GO:0000049 ... P35871 23630274
    296281 4v97:D7 (3.516) BS01 rna ? GO:0003735 ... P80340 23630274
    296282 4v97:D8 (3.516) BS01 rna ? GO:0003735 ... Q5SKU1 23630274
    296283 4v97:D9 (3.516) BS01 rna ? GO:0003735 ... Q5SHR2 23630274
    296284 4v97:DC (3.516) BS01 rna ? GO:0000049 ... Q5SLP7 23630274
    296285 4v97:DD (3.516) BS01 rna ? GO:0002181 ... P60405 23630274
    296286 4v97:DD (3.516) BS02 rna ? GO:0002181 ... P60405 23630274
    296287 4v97:DD (3.516) BS03 MG ? GO:0002181 ... P60405 23630274
    296288 4v97:DE (3.516) BS01 rna ? GO:0003735 ... Q5SHN8 23630274
    296289 4v97:DF (3.516) BS01 rna ? GO:0003735 ... Q5SHN9 23630274
    296290 4v97:DF (3.516) BS02 MG ? GO:0003735 ... Q5SHN9 23630274
    296291 4v97:DG (3.516) BS01 rna ? GO:0000049 ... Q5SHQ0 23630274
    296292 4v97:DG (3.516) BS02 rna ? GO:0000049 ... Q5SHQ0 23630274
    296293 4v97:DH (3.516) BS01 rna N/A GO:0003735 ... N/A 23630274
    296294 4v97:DI (3.516) BS01 rna ? GO:0003735 ... Q5SLQ1 23630274
    296295 4v97:DI (3.516) BS02 rna ? GO:0003735 ... Q5SLQ1 23630274
    296296 4v97:DN (3.516) BS01 rna ? GO:0003729 ... P60488 23630274
    296297 4v97:DO (3.516) BS01 rna ? GO:0003735 ... Q5SHP8 23630274
    296298 4v97:DO (3.516) BS02 rna ? GO:0003735 ... Q5SHP8 23630274
    296299 4v97:DP (3.516) BS01 rna ? GO:0003735 ... Q5SHQ7 23630274
    296300 4v97:DQ (3.516) BS01 rna ? GO:0000049 ... P60489 23630274
    296301 4v97:DQ (3.516) BS02 rna ? GO:0000049 ... P60489 23630274
    296302 4v97:DQ (3.516) BS03 MG ? GO:0000049 ... P60489 23630274
    296303 4v97:DR (3.516) BS01 rna ? GO:0003735 ... Q9Z9H5 23630274
    296304 4v97:DS (3.516) BS01 rna ? GO:0003735 ... Q5SHQ4 23630274
    296305 4v97:DS (3.516) BS02 rna ? GO:0003735 ... Q5SHQ4 23630274
    296306 4v97:DT (3.516) BS01 rna ? GO:0003735 ... P60490 23630274
    296307 4v97:DT (3.516) BS02 rna ? GO:0003735 ... P60490 23630274
    296308 4v97:DU (3.516) BS01 rna ? GO:0000027 ... P60491 23630274
    296309 4v97:DU (3.516) BS02 MG ? GO:0000027 ... P60491 23630274
    296310 4v97:DV (3.516) BS01 rna ? GO:0003723 ... P60492 23630274
    296311 4v97:DW (3.516) BS01 rna ? GO:0003735 ... Q5SHP3 23630274
    296312 4v97:DX (3.516) BS01 rna ? GO:0003735 ... Q5SHP0 23630274
    296313 4v97:DY (3.516) BS01 rna ? GO:0003723 ... Q5SHP9 23630274
    296314 4v97:DZ (3.516) BS01 rna ? GO:0003723 ... Q5SHZ1 23630274
    296315 4v97:DZ (3.516) BS02 rna ? GO:0003723 ... Q5SHZ1 23630274
    296316 4v98:A2 (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296317 4v98:AF (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296318 4v98:AN (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296319 4v98:AV (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296320 4v98:Ad (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296321 4v98:Al (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296322 4v98:At (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296323 4v98:B2 (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296324 4v98:BF (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296325 4v98:BN (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296326 4v98:BV (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296327 4v98:Bd (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296328 4v98:Bl (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296329 4v98:Bt (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296330 4v98:CF (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296331 4v98:CN (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296332 4v98:CV (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296333 4v98:Cd (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296334 4v98:Cl (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296335 4v98:Ct (3.1) BS01 peptide ? GO:0000245 ... Q9VVX0 23333303
    296336 4v99:A4 (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296337 4v99:A5 (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296338 4v99:AA (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296339 4v99:AB (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296340 4v99:AF (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296341 4v99:AG (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296342 4v99:AK (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296343 4v99:AL (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296344 4v99:AP (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296345 4v99:AP (2.9) BS02 CA ? GO:0005198 ... P89036 23123270
    296346 4v99:AQ (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296347 4v99:AU (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296348 4v99:AV (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296349 4v99:AZ (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296350 4v99:Aa (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296351 4v99:Ae (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296352 4v99:Af (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296353 4v99:Aj (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296354 4v99:Ak (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296355 4v99:Ao (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296356 4v99:Ap (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296357 4v99:At (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296358 4v99:Au (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296359 4v99:Au (2.9) BS02 CA ? GO:0005198 ... P89036 23123270
    296360 4v99:Ay (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296361 4v99:Az (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296362 4v99:B4 (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296363 4v99:B5 (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296364 4v99:BA (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296365 4v99:BB (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296366 4v99:BF (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296367 4v99:BG (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296368 4v99:BK (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296369 4v99:BL (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296370 4v99:BP (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296371 4v99:BQ (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296372 4v99:BU (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296373 4v99:BV (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296374 4v99:BZ (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296375 4v99:Ba (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296376 4v99:Be (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296377 4v99:Bf (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296378 4v99:Bj (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296379 4v99:Bk (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296380 4v99:Bo (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296381 4v99:Bp (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296382 4v99:Bt (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296383 4v99:Bu (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296384 4v99:By (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296385 4v99:Bz (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296386 4v99:C4 (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296387 4v99:C5 (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296388 4v99:CA (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296389 4v99:CB (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296390 4v99:CF (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296391 4v99:CG (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296392 4v99:CK (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296393 4v99:CL (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296394 4v99:CP (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296395 4v99:CP (2.9) BS02 CA ? GO:0005198 ... P89036 23123270
    296396 4v99:CQ (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296397 4v99:CU (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296398 4v99:CV (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296399 4v99:CZ (2.9) BS01 rna ? GO:0005198 ... P89036 23123270
    296400 4v99:Ca (2.9) BS01 rna ? GO:0005198 ... P89036 23123270

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).