SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1482 1483 1484 1485 1486 1487 1488 1489 1490 1491 1492 1493 1494 1495 1496 1497 1498 1499 1500 1501 1502 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    298201 4v9o:A5 (2.9) BS01 rna ? GO:0002181 ... P0A7J3 23812721
    298202 4v9o:AC (2.9) BS01 rna ? GO:0000027 ... P60422 23812721
    298203 4v9o:AC (2.9) BS02 rna ? GO:0000027 ... P60422 23812721
    298204 4v9o:AD (2.9) BS01 rna ? GO:0000027 ... P60438 23812721
    298205 4v9o:AE (2.9) BS01 rna ? GO:0001070 ... P60723 23812721
    298206 4v9o:AF (2.9) BS01 rna ? GO:0000027 ... P62399 23812721
    298207 4v9o:AF (2.9) BS02 rna ? GO:0000027 ... P62399 23812721
    298208 4v9o:AG (2.9) BS01 rna ? GO:0000027 ... P0AG55 23812721
    298209 4v9o:AG (2.9) BS02 rna ? GO:0000027 ... P0AG55 23812721
    298210 4v9o:AH (2.9) BS01 rna ? GO:0003735 ... P0A7R1 23812721
    298211 4v9o:AI (2.9) BS01 rna ? GO:0000027 ... P0A7J7 23812721
    298212 4v9o:AJ (2.9) BS01 rna ? GO:0002181 ... P0AA10 23812721
    298213 4v9o:AK (2.9) BS01 rna ? GO:0002181 ... P0ADY3 23812721
    298214 4v9o:AK (2.9) BS02 rna ? GO:0002181 ... P0ADY3 23812721
    298215 4v9o:AL (2.9) BS01 rna ? GO:0002181 ... P02413 23812721
    298216 4v9o:AM (2.9) BS01 rna ? GO:0000027 ... P0ADY7 23812721
    298217 4v9o:AM (2.9) BS02 rna ? GO:0000027 ... P0ADY7 23812721
    298218 4v9o:AN (2.9) BS01 rna ? GO:0000027 ... P0AG44 23812721
    298219 4v9o:AO (2.9) BS01 rna ? GO:0002181 ... P0C018 23812721
    298220 4v9o:AO (2.9) BS02 rna ? GO:0002181 ... P0C018 23812721
    298221 4v9o:AP (2.9) BS01 rna ? GO:0000027 ... P0A7K6 23812721
    298222 4v9o:AP (2.9) BS02 rna ? GO:0000027 ... P0A7K6 23812721
    298223 4v9o:AQ (2.9) BS01 rna ? GO:0000027 ... P0A7L3 23812721
    298224 4v9o:AR (2.9) BS01 rna ? GO:0002181 ... P0AG48 23812721
    298225 4v9o:AS (2.9) BS01 rna ? GO:0002181 ... P61175 23812721
    298226 4v9o:AT (2.9) BS01 rna ? GO:0000027 ... P0ADZ0 23812721
    298227 4v9o:AU (2.9) BS01 rna ? GO:0000027 ... P60624 23812721
    298228 4v9o:AV (2.9) BS01 rna ? GO:0000027 ... P68919 23812721
    298229 4v9o:AV (2.9) BS02 rna ? GO:0000027 ... P68919 23812721
    298230 4v9o:AW (2.9) BS01 rna ? GO:0000027 ... P0A7L8 23812721
    298231 4v9o:AX (2.9) BS01 rna ? GO:0000027 ... P0A7M2 23812721
    298232 4v9o:AY (2.9) BS01 rna ? GO:0000027 ... P0A7M6 23812721
    298233 4v9o:AZ (2.9) BS01 rna ? GO:0000027 ... P0AG51 23812721
    298234 4v9o:AZ (2.9) BS02 rna ? GO:0000027 ... P0AG51 23812721
    298235 4v9o:BB (2.9) BS01 rna ? GO:0000028 ... P0A7V0 23812721
    298236 4v9o:BC (2.9) BS01 rna ? GO:0000028 ... P0A7V3 23812721
    298237 4v9o:BD (2.9) BS01 rna ? GO:0000028 ... P0A7V8 23812721
    298238 4v9o:BE (2.9) BS01 rna ? GO:0000028 ... P0A7W1 23812721
    298239 4v9o:BF (2.9) BS01 rna ? GO:0002181 ... P02358 23812721
    298240 4v9o:BG (2.9) BS01 rna ? GO:0000028 ... P02359 23812721
    298241 4v9o:BH (2.9) BS01 rna ? GO:0000028 ... P0A7W7 23812721
    298242 4v9o:BI (2.9) BS01 rna ? GO:0000049 ... P0A7X3 23812721
    298243 4v9o:BJ (2.9) BS01 rna ? GO:0000049 ... P0A7R5 23812721
    298244 4v9o:BK (2.9) BS01 rna ? GO:0002181 ... P0A7R9 23812721
    298245 4v9o:BL (2.9) BS01 rna ? GO:0000049 ... P0A7S3 23812721
    298246 4v9o:BM (2.9) BS01 rna ? GO:0000049 ... P0A7S9 23812721
    298247 4v9o:BN (2.9) BS01 rna ? GO:0000028 ... P0AG59 23812721
    298248 4v9o:BO (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 23812721
    298249 4v9o:BO (2.9) BS02 rna ? GO:0000028 ... P0ADZ4 23812721
    298250 4v9o:BP (2.9) BS01 rna ? GO:0000028 ... P0A7T3 23812721
    298251 4v9o:BQ (2.9) BS01 rna ? GO:0000028 ... P0AG63 23812721
    298252 4v9o:BR (2.9) BS01 rna ? GO:0002181 ... P0A7T7 23812721
    298253 4v9o:BS (2.9) BS01 rna ? GO:0000028 ... P0A7U3 23812721
    298254 4v9o:BT (2.9) BS01 rna ? GO:0000028 ... P0A7U7 23812721
    298255 4v9o:BU (2.9) BS01 rna ? GO:0000028 ... P68679 23812721
    298256 4v9o:BV (2.9) BS01 rna 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298257 4v9o:BV (2.9) BS02 rna 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298258 4v9o:BV (2.9) BS03 MG 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298259 4v9o:C0 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 23812721
    298260 4v9o:C1 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 23812721
    298261 4v9o:C2 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 23812721
    298262 4v9o:C3 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 23812721
    298263 4v9o:C4 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 23812721
    298264 4v9o:C4 (2.9) BS02 ZN ? GO:0002181 ... P0A7Q6 23812721
    298265 4v9o:C5 (2.9) BS01 rna ? GO:0002181 ... P0A7J3 23812721
    298266 4v9o:CC (2.9) BS01 rna ? GO:0000027 ... P60422 23812721
    298267 4v9o:CC (2.9) BS02 rna ? GO:0000027 ... P60422 23812721
    298268 4v9o:CD (2.9) BS01 rna ? GO:0000027 ... P60438 23812721
    298269 4v9o:CE (2.9) BS01 rna ? GO:0001070 ... P60723 23812721
    298270 4v9o:CF (2.9) BS01 rna ? GO:0000027 ... P62399 23812721
    298271 4v9o:CF (2.9) BS02 rna ? GO:0000027 ... P62399 23812721
    298272 4v9o:CG (2.9) BS01 rna ? GO:0000027 ... P0AG55 23812721
    298273 4v9o:CH (2.9) BS01 rna ? GO:0003735 ... P0A7R1 23812721
    298274 4v9o:CH (2.9) BS02 rna ? GO:0003735 ... P0A7R1 23812721
    298275 4v9o:CI (2.9) BS01 rna ? GO:0000027 ... P0A7J7 23812721
    298276 4v9o:CJ (2.9) BS01 rna ? GO:0002181 ... P0AA10 23812721
    298277 4v9o:CK (2.9) BS01 rna ? GO:0002181 ... P0ADY3 23812721
    298278 4v9o:CK (2.9) BS02 rna ? GO:0002181 ... P0ADY3 23812721
    298279 4v9o:CL (2.9) BS01 rna ? GO:0002181 ... P02413 23812721
    298280 4v9o:CM (2.9) BS01 rna ? GO:0000027 ... P0ADY7 23812721
    298281 4v9o:CM (2.9) BS02 rna ? GO:0000027 ... P0ADY7 23812721
    298282 4v9o:CN (2.9) BS01 rna ? GO:0000027 ... P0AG44 23812721
    298283 4v9o:CO (2.9) BS01 rna ? GO:0002181 ... P0C018 23812721
    298284 4v9o:CO (2.9) BS02 rna ? GO:0002181 ... P0C018 23812721
    298285 4v9o:CP (2.9) BS01 rna ? GO:0000027 ... P0A7K6 23812721
    298286 4v9o:CP (2.9) BS02 rna ? GO:0000027 ... P0A7K6 23812721
    298287 4v9o:CQ (2.9) BS01 rna ? GO:0000027 ... P0A7L3 23812721
    298288 4v9o:CR (2.9) BS01 rna ? GO:0002181 ... P0AG48 23812721
    298289 4v9o:CS (2.9) BS01 rna ? GO:0002181 ... P61175 23812721
    298290 4v9o:CT (2.9) BS01 rna ? GO:0000027 ... P0ADZ0 23812721
    298291 4v9o:CU (2.9) BS01 rna ? GO:0000027 ... P60624 23812721
    298292 4v9o:CV (2.9) BS01 rna ? GO:0000027 ... P68919 23812721
    298293 4v9o:CV (2.9) BS02 rna ? GO:0000027 ... P68919 23812721
    298294 4v9o:CW (2.9) BS01 rna ? GO:0000027 ... P0A7L8 23812721
    298295 4v9o:CX (2.9) BS01 rna ? GO:0000027 ... P0A7M2 23812721
    298296 4v9o:CY (2.9) BS01 rna ? GO:0000027 ... P0A7M6 23812721
    298297 4v9o:CZ (2.9) BS01 rna ? GO:0000027 ... P0AG51 23812721
    298298 4v9o:DB (2.9) BS01 rna ? GO:0000028 ... P0A7V0 23812721
    298299 4v9o:DC (2.9) BS01 rna ? GO:0000028 ... P0A7V3 23812721
    298300 4v9o:DD (2.9) BS01 rna ? GO:0000028 ... P0A7V8 23812721
    298301 4v9o:DE (2.9) BS01 rna ? GO:0000028 ... P0A7W1 23812721
    298302 4v9o:DF (2.9) BS01 rna ? GO:0002181 ... P02358 23812721
    298303 4v9o:DG (2.9) BS01 rna ? GO:0000028 ... P02359 23812721
    298304 4v9o:DH (2.9) BS01 rna ? GO:0000028 ... P0A7W7 23812721
    298305 4v9o:DI (2.9) BS01 rna ? GO:0000049 ... P0A7X3 23812721
    298306 4v9o:DJ (2.9) BS01 rna ? GO:0000049 ... P0A7R5 23812721
    298307 4v9o:DK (2.9) BS01 rna ? GO:0002181 ... P0A7R9 23812721
    298308 4v9o:DL (2.9) BS01 rna ? GO:0000049 ... P0A7S3 23812721
    298309 4v9o:DM (2.9) BS01 rna ? GO:0000049 ... P0A7S9 23812721
    298310 4v9o:DN (2.9) BS01 rna ? GO:0000028 ... P0AG59 23812721
    298311 4v9o:DO (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 23812721
    298312 4v9o:DO (2.9) BS02 rna ? GO:0000028 ... P0ADZ4 23812721
    298313 4v9o:DP (2.9) BS01 rna ? GO:0000028 ... P0A7T3 23812721
    298314 4v9o:DQ (2.9) BS01 rna ? GO:0000028 ... P0AG63 23812721
    298315 4v9o:DR (2.9) BS01 rna ? GO:0002181 ... P0A7T7 23812721
    298316 4v9o:DS (2.9) BS01 rna ? GO:0000028 ... P0A7U3 23812721
    298317 4v9o:DT (2.9) BS01 rna ? GO:0000028 ... P0A7U7 23812721
    298318 4v9o:DU (2.9) BS01 rna ? GO:0000028 ... P68679 23812721
    298319 4v9o:DV (2.9) BS01 rna 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298320 4v9o:DV (2.9) BS02 rna 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298321 4v9o:DV (2.9) BS03 MG 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298322 4v9o:E0 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 23812721
    298323 4v9o:E1 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 23812721
    298324 4v9o:E2 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 23812721
    298325 4v9o:E3 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 23812721
    298326 4v9o:E4 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 23812721
    298327 4v9o:E4 (2.9) BS02 ZN ? GO:0002181 ... P0A7Q6 23812721
    298328 4v9o:E5 (2.9) BS01 rna ? GO:0002181 ... P0A7J3 23812721
    298329 4v9o:EC (2.9) BS01 rna ? GO:0000027 ... P60422 23812721
    298330 4v9o:EC (2.9) BS02 rna ? GO:0000027 ... P60422 23812721
    298331 4v9o:EC (2.9) BS03 MG ? GO:0000027 ... P60422 23812721
    298332 4v9o:ED (2.9) BS01 rna ? GO:0000027 ... P60438 23812721
    298333 4v9o:EE (2.9) BS01 rna ? GO:0001070 ... P60723 23812721
    298334 4v9o:EF (2.9) BS01 rna ? GO:0000027 ... P62399 23812721
    298335 4v9o:EF (2.9) BS02 rna ? GO:0000027 ... P62399 23812721
    298336 4v9o:EG (2.9) BS01 rna ? GO:0000027 ... P0AG55 23812721
    298337 4v9o:EG (2.9) BS02 rna ? GO:0000027 ... P0AG55 23812721
    298338 4v9o:EH (2.9) BS01 rna ? GO:0003735 ... P0A7R1 23812721
    298339 4v9o:EI (2.9) BS01 rna ? GO:0000027 ... P0A7J7 23812721
    298340 4v9o:EJ (2.9) BS01 rna ? GO:0002181 ... P0AA10 23812721
    298341 4v9o:EK (2.9) BS01 rna ? GO:0002181 ... P0ADY3 23812721
    298342 4v9o:EK (2.9) BS02 rna ? GO:0002181 ... P0ADY3 23812721
    298343 4v9o:EL (2.9) BS01 rna ? GO:0002181 ... P02413 23812721
    298344 4v9o:EM (2.9) BS01 rna ? GO:0000027 ... P0ADY7 23812721
    298345 4v9o:EM (2.9) BS02 rna ? GO:0000027 ... P0ADY7 23812721
    298346 4v9o:EN (2.9) BS01 rna ? GO:0000027 ... P0AG44 23812721
    298347 4v9o:EO (2.9) BS01 rna ? GO:0002181 ... P0C018 23812721
    298348 4v9o:EO (2.9) BS02 rna ? GO:0002181 ... P0C018 23812721
    298349 4v9o:EP (2.9) BS01 rna ? GO:0000027 ... P0A7K6 23812721
    298350 4v9o:EP (2.9) BS02 rna ? GO:0000027 ... P0A7K6 23812721
    298351 4v9o:EQ (2.9) BS01 rna ? GO:0000027 ... P0A7L3 23812721
    298352 4v9o:ER (2.9) BS01 rna ? GO:0002181 ... P0AG48 23812721
    298353 4v9o:ES (2.9) BS01 rna ? GO:0002181 ... P61175 23812721
    298354 4v9o:ET (2.9) BS01 rna ? GO:0000027 ... P0ADZ0 23812721
    298355 4v9o:EU (2.9) BS01 rna ? GO:0000027 ... P60624 23812721
    298356 4v9o:EV (2.9) BS01 rna ? GO:0000027 ... P68919 23812721
    298357 4v9o:EV (2.9) BS02 rna ? GO:0000027 ... P68919 23812721
    298358 4v9o:EW (2.9) BS01 rna ? GO:0000027 ... P0A7L8 23812721
    298359 4v9o:EX (2.9) BS01 rna ? GO:0000027 ... P0A7M2 23812721
    298360 4v9o:EY (2.9) BS01 rna ? GO:0000027 ... P0A7M6 23812721
    298361 4v9o:EZ (2.9) BS01 rna ? GO:0000027 ... P0AG51 23812721
    298362 4v9o:EZ (2.9) BS02 rna ? GO:0000027 ... P0AG51 23812721
    298363 4v9o:FB (2.9) BS01 rna ? GO:0000028 ... P0A7V0 23812721
    298364 4v9o:FC (2.9) BS01 rna ? GO:0000028 ... P0A7V3 23812721
    298365 4v9o:FD (2.9) BS01 rna ? GO:0000028 ... P0A7V8 23812721
    298366 4v9o:FE (2.9) BS01 rna ? GO:0000028 ... P0A7W1 23812721
    298367 4v9o:FE (2.9) BS02 MG ? GO:0000028 ... P0A7W1 23812721
    298368 4v9o:FF (2.9) BS01 rna ? GO:0002181 ... P02358 23812721
    298369 4v9o:FG (2.9) BS01 rna ? GO:0000028 ... P02359 23812721
    298370 4v9o:FH (2.9) BS01 rna ? GO:0000028 ... P0A7W7 23812721
    298371 4v9o:FI (2.9) BS01 rna ? GO:0000049 ... P0A7X3 23812721
    298372 4v9o:FJ (2.9) BS01 rna ? GO:0000049 ... P0A7R5 23812721
    298373 4v9o:FK (2.9) BS01 rna ? GO:0002181 ... P0A7R9 23812721
    298374 4v9o:FL (2.9) BS01 rna ? GO:0000049 ... P0A7S3 23812721
    298375 4v9o:FM (2.9) BS01 rna ? GO:0000049 ... P0A7S9 23812721
    298376 4v9o:FN (2.9) BS01 rna ? GO:0000028 ... P0AG59 23812721
    298377 4v9o:FO (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 23812721
    298378 4v9o:FO (2.9) BS02 rna ? GO:0000028 ... P0ADZ4 23812721
    298379 4v9o:FP (2.9) BS01 rna ? GO:0000028 ... P0A7T3 23812721
    298380 4v9o:FQ (2.9) BS01 rna ? GO:0000028 ... P0AG63 23812721
    298381 4v9o:FR (2.9) BS01 rna ? GO:0002181 ... P0A7T7 23812721
    298382 4v9o:FS (2.9) BS01 rna ? GO:0000028 ... P0A7U3 23812721
    298383 4v9o:FT (2.9) BS01 rna ? GO:0000028 ... P0A7U7 23812721
    298384 4v9o:FU (2.9) BS01 rna ? GO:0000028 ... P68679 23812721
    298385 4v9o:FV (2.9) BS01 rna 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298386 4v9o:FV (2.9) BS02 rna 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298387 4v9o:FV (2.9) BS03 MG 3.6.5.- GO:0003746 ... P0A6M8 23812721
    298388 4v9o:G0 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 23812721
    298389 4v9o:G1 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 23812721
    298390 4v9o:G2 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 23812721
    298391 4v9o:G3 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 23812721
    298392 4v9o:G4 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 23812721
    298393 4v9o:G4 (2.9) BS02 ZN ? GO:0002181 ... P0A7Q6 23812721
    298394 4v9o:GC (2.9) BS01 rna ? GO:0000027 ... P60422 23812721
    298395 4v9o:GD (2.9) BS01 rna ? GO:0000027 ... P60438 23812721
    298396 4v9o:GE (2.9) BS01 rna ? GO:0001070 ... P60723 23812721
    298397 4v9o:GE (2.9) BS02 MG ? GO:0001070 ... P60723 23812721
    298398 4v9o:GF (2.9) BS01 rna ? GO:0000027 ... P62399 23812721
    298399 4v9o:GF (2.9) BS02 rna ? GO:0000027 ... P62399 23812721
    298400 4v9o:GG (2.9) BS01 rna ? GO:0000027 ... P0AG55 23812721

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).