SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    29801 1l5y:B (2.1) BS04 BEF ? GO:0000160 ... P13632 12368235
    29802 1l6f:A (2.0) BS01 PP3 5.1.1.1 GO:0003824 ... P10724 11886871
    29803 1l6f:A (2.0) BS02 PP3 5.1.1.1 GO:0003824 ... P10724 11886871
    29804 1l6f:B (2.0) BS01 PP3 5.1.1.1 GO:0003824 ... P10724 11886871
    29805 1l6f:B (2.0) BS02 PP3 5.1.1.1 GO:0003824 ... P10724 11886871
    29806 1l6g:A (2.0) BS01 PDD 5.1.1.1 GO:0003824 ... P10724 11886871
    29807 1l6g:A (2.0) BS02 PDD 5.1.1.1 GO:0003824 ... P10724 11886871
    29808 1l6g:B (2.0) BS01 PDD 5.1.1.1 GO:0003824 ... P10724 11886871
    29809 1l6g:B (2.0) BS02 PDD 5.1.1.1 GO:0003824 ... P10724 11886871
    29810 1l6i:A (2.2) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29811 1l6i:A (2.2) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29812 1l6i:A (2.2) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29813 1l6i:A (2.2) BS04 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29814 1l6i:A (2.2) BS05 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29815 1l6i:A (2.2) BS06 PO4 2.4.1.1 GO:0004645 ... P00490 12217700
    29816 1l6i:A (2.2) BS07 PLP 2.4.1.1 GO:0004645 ... P00490 12217700
    29817 1l6i:B (2.2) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29818 1l6i:B (2.2) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29819 1l6i:B (2.2) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29820 1l6i:B (2.2) BS04 GLC 2.4.1.1 GO:0004645 ... P00490 12217700
    29821 1l6i:B (2.2) BS05 PO4 2.4.1.1 GO:0004645 ... P00490 12217700
    29822 1l6i:B (2.2) BS06 PLP 2.4.1.1 GO:0004645 ... P00490 12217700
    29823 1l6j:A (2.5) BS01 ZN 3.4.24.35 GO:0004222 ... P14780 12077439
    29824 1l6j:A (2.5) BS02 ZN 3.4.24.35 GO:0004222 ... P14780 12077439
    29825 1l6j:A (2.5) BS03 CA 3.4.24.35 GO:0004222 ... P14780 12077439
    29826 1l6j:A (2.5) BS04 CA 3.4.24.35 GO:0004222 ... P14780 12077439
    29827 1l6j:A (2.5) BS05 CA 3.4.24.35 GO:0004222 ... P14780 12077439
    29828 1l6m:A (2.4) BS01 DBH ? GO:0002020 ... P80188 12453412
    29829 1l6m:A (2.4) BS02 DBH ? GO:0002020 ... P80188 12453412
    29830 1l6m:A (2.4) BS03 DBS ? GO:0002020 ... P80188 12453412
    29831 1l6m:B (2.4) BS01 DBH ? GO:0002020 ... P80188 12453412
    29832 1l6m:B (2.4) BS02 DBS ? GO:0002020 ... P80188 12453412
    29833 1l6m:C (2.4) BS01 DBH ? GO:0002020 ... P80188 12453412 MOAD: Kd=7.9nM
    29834 1l6m:C (2.4) BS02 DBS ? GO:0002020 ... P80188 12453412
    29835 1l6o:A (2.2) BS01 peptide ? GO:0016055 ... P51142 11970895
    29836 1l6o:A (2.2) BS02 peptide ? GO:0016055 ... P51142 11970895
    29837 1l6o:B (2.2) BS01 peptide ? GO:0016055 ... P51142 11970895
    29838 1l6o:B (2.2) BS02 peptide ? GO:0016055 ... P51142 11970895
    29839 1l6o:C (2.2) BS01 peptide ? GO:0016055 ... P51142 11970895
    29840 1l6r:A (1.4) BS01 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 14555659
    29841 1l6r:A (1.4) BS02 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 14555659
    29842 1l6r:A (1.4) BS03 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 14555659
    29843 1l6r:B (1.4) BS01 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 14555659
    29844 1l6r:B (1.4) BS02 CA 3.1.3.18 GO:0000287 ... Q9HLQ2 14555659
    29845 1l6s:A (1.7) BS01 ZN 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29846 1l6s:A (1.7) BS02 DSB 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29847 1l6s:B (1.7) BS01 ZN 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29848 1l6s:B (1.7) BS02 DSB 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29849 1l6u:A (-1.00) BS01 FES ? GO:0051536 ... P00257 12069587
    29850 1l6v:A (-1.00) BS01 FES ? GO:0051536 ... P00257 12069587
    29851 1l6x:A (1.65) BS01 BMA ? N/A P01857 10754313
    29852 1l6x:A (1.65) BS02 GAL ? N/A P01857 10754313
    29853 1l6y:A (1.9) BS01 ZN 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29854 1l6y:A (1.9) BS02 4OX 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29855 1l6y:B (1.9) BS01 ZN 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29856 1l6y:B (1.9) BS02 4OX 4.2.1.24 GO:0000287 ... P0ACB2 11909869
    29857 1l7e:A (1.9) BS01 NAI 7.1.1.1 GO:0003957 ... Q2RSB2 12379117
    29858 1l7e:D (1.9) BS01 NAI 7.1.1.1 GO:0003957 ... Q2RSB2 12379117
    29859 1l7f:A (1.8) BS01 CA 3.2.1.18 GO:0004308 ... P03472 12014958
    29860 1l7f:A (1.8) BS02 BCZ 3.2.1.18 GO:0004308 ... P03472 12014958
    29861 1l7g:A (1.85) BS01 CA 3.2.1.18 GO:0004308 ... P03472 12014958
    29862 1l7g:A (1.85) BS02 BCZ 3.2.1.18 GO:0004308 ... P03472 12014958
    29863 1l7h:A (1.85) BS01 CA 3.2.1.18 GO:0004308 ... P03472 12014958
    29864 1l7h:A (1.85) BS02 CA 3.2.1.18 GO:0004308 ... P03472 12014958
    29865 1l7h:A (1.85) BS03 BCZ 3.2.1.18 GO:0004308 ... P03472 12014958
    29866 1l7k:A (1.95) BS01 GLA 5.1.3.3 GO:0004034 ... Q9ZB17 11907040
    29867 1l7k:B (1.95) BS01 GLA 5.1.3.3 GO:0004034 ... Q9ZB17 11907040
    29868 1l7l:A (1.5) BS01 CA ? GO:0005737 ... Q05097 N/A
    29869 1l7m:A (1.48) BS01 PO4 3.1.3.3 GO:0000287 ... Q58989 12051918
    29870 1l7m:A (1.48) BS02 MG 3.1.3.3 GO:0000287 ... Q58989 12051918
    29871 1l7m:A (1.48) BS03 PO4 3.1.3.3 GO:0000287 ... Q58989 12051918
    29872 1l7m:A (1.48) BS04 PO4 3.1.3.3 GO:0000287 ... Q58989 12051918
    29873 1l7m:B (1.48) BS01 PO4 3.1.3.3 GO:0000287 ... Q58989 12051918
    29874 1l7m:B (1.48) BS02 MG 3.1.3.3 GO:0000287 ... Q58989 12051918
    29875 1l7n:A (1.8) BS01 ALF 3.1.3.3 GO:0000287 ... Q58989 12051918
    29876 1l7n:A (1.8) BS02 MG 3.1.3.3 GO:0000287 ... Q58989 12051918
    29877 1l7n:A (1.8) BS03 AF3 3.1.3.3 GO:0000287 ... Q58989 12051918
    29878 1l7n:B (1.8) BS01 ALF 3.1.3.3 GO:0000287 ... Q58989 12051918
    29879 1l7n:B (1.8) BS02 MG 3.1.3.3 GO:0000287 ... Q58989 12051918
    29880 1l7n:B (1.8) BS03 AF3 3.1.3.3 GO:0000287 ... Q58989 12051918
    29881 1l7o:A (2.2) BS01 ZN 3.1.3.3 GO:0000287 ... Q58989 12051918
    29882 1l7o:B (2.2) BS01 ZN 3.1.3.3 GO:0000287 ... Q58989 12051918
    29883 1l7p:A (1.9) BS01 SEP 3.1.3.3 GO:0000287 ... Q58989 12051918
    29884 1l7p:B (1.9) BS01 SEP 3.1.3.3 GO:0000287 ... Q58989 12051918
    29885 1l7v:C (3.2) BS01 V4O 7.6.2.8 GO:0005515 ... P06611 12004122
    29886 1l7v:D (3.2) BS01 V4O 7.6.2.8 GO:0005515 ... P06611 12004122
    29887 1l7x:A (2.3) BS01 NBG 2.4.1.1 GO:0002060 ... P06737 12204691
    29888 1l7x:A (2.3) BS02 PLP 2.4.1.1 GO:0002060 ... P06737 12204691
    29889 1l7x:A (2.3) BS03 700 2.4.1.1 GO:0002060 ... P06737 12204691 MOAD: ic50=0.145uM
    BindingDB: IC50=45nM
    29890 1l7x:A (2.3) BS04 CFF 2.4.1.1 GO:0002060 ... P06737 12204691 MOAD: Kd=92uM
    29891 1l7x:A (2.3) BS05 CFF 2.4.1.1 GO:0002060 ... P06737 12204691 MOAD: Kd=92uM
    29892 1l7x:A (2.3) BS06 700 2.4.1.1 GO:0002060 ... P06737 12204691 MOAD: ic50=0.145uM
    BindingDB: IC50=45nM
    29893 1l7x:B (2.3) BS01 700 2.4.1.1 GO:0002060 ... P06737 12204691 MOAD: ic50=0.145uM
    BindingDB: IC50=45nM
    29894 1l7x:B (2.3) BS02 NBG 2.4.1.1 GO:0002060 ... P06737 12204691
    29895 1l7x:B (2.3) BS03 PLP 2.4.1.1 GO:0002060 ... P06737 12204691
    29896 1l7x:B (2.3) BS04 700 2.4.1.1 GO:0002060 ... P06737 12204691 MOAD: ic50=0.145uM
    BindingDB: IC50=45nM
    29897 1l7x:B (2.3) BS05 CFF 2.4.1.1 GO:0002060 ... P06737 12204691 MOAD: Kd=92uM
    29898 1l7z:A (2.3) BS01 peptide ? GO:0000922 ... P0DP23 14765114
    29899 1l7z:A (2.3) BS02 CA ? GO:0000922 ... P0DP23 14765114
    29900 1l7z:A (2.3) BS03 CA ? GO:0000922 ... P0DP23 14765114
    29901 1l7z:A (2.3) BS04 CA ? GO:0000922 ... P0DP23 14765114
    29902 1l7z:A (2.3) BS05 CA ? GO:0000922 ... P0DP23 14765114
    29903 1l83:A (1.7) BS01 BNZ 3.2.1.17 GO:0003796 ... P00720 1731252 MOAD: Kd=0.4mM
    29904 1l84:A (1.9) BS01 BNZ 3.2.1.17 GO:0003796 ... P00720 1731252
    29905 1l8a:A (1.85) BS01 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    29906 1l8a:A (1.85) BS02 MG 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    29907 1l8a:A (1.85) BS03 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    29908 1l8a:B (1.85) BS01 MG 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    29909 1l8a:B (1.85) BS02 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    29910 1l8a:B (1.85) BS03 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    29911 1l8b:A (1.8) BS01 MGP ? GO:0003723 ... P63073 12054859 MOAD: Kd=0.14uM
    BindingDB: Kd=10nM
    29912 1l8b:B (1.8) BS01 MGP ? GO:0003723 ... P63073 12054859 MOAD: Kd=0.14uM
    BindingDB: Kd=10nM
    29913 1l8c:A (-1.00) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 11959977
    29914 1l8c:A (-1.00) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 11959977
    29915 1l8c:A (-1.00) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 11959977
    29916 1l8g:A (2.5) BS01 DBD 3.1.3.48 GO:0004725 ... P18031 11732900 BindingDB: Ki=1100nM
    29917 1l8l:A (2.51) BS01 APO 3.1.3.3 GO:0000287 ... P78330 12213811
    29918 1l8l:B (2.51) BS01 APO 3.1.3.3 GO:0000287 ... P78330 12213811
    29919 1l8n:A (1.5) BS01 XYP 3.2.1.131 GO:0005576 ... Q8VVD2 14573597
    29920 1l8n:A (1.5) BS02 XYP 3.2.1.131 GO:0005576 ... Q8VVD2 14573597
    29921 1l8n:A (1.5) BS03 GCW 3.2.1.131 GO:0005576 ... Q8VVD2 14573597
    29922 1l8o:A (2.8) BS01 PO4 3.1.3.3 GO:0000287 ... P78330 12213811
    29923 1l8o:A (2.8) BS02 SER 3.1.3.3 GO:0000287 ... P78330 12213811
    29924 1l8o:B (2.8) BS01 PO4 3.1.3.3 GO:0000287 ... P78330 12213811
    29925 1l8o:B (2.8) BS02 SER 3.1.3.3 GO:0000287 ... P78330 12213811
    29926 1l8p:A (2.1) BS01 MG 4.2.1.11 GO:0000015 ... P00924 12054465
    29927 1l8p:A (2.1) BS02 PAH 4.2.1.11 GO:0000015 ... P00924 12054465
    29928 1l8p:B (2.1) BS01 MG 4.2.1.11 GO:0000015 ... P00924 12054465
    29929 1l8p:B (2.1) BS02 PAH 4.2.1.11 GO:0000015 ... P00924 12054465
    29930 1l8p:C (2.1) BS01 MG 4.2.1.11 GO:0000015 ... P00924 12054465
    29931 1l8p:C (2.1) BS02 PAH 4.2.1.11 GO:0000015 ... P00924 12054465
    29932 1l8p:D (2.1) BS01 MG 4.2.1.11 GO:0000015 ... P00924 12054465
    29933 1l8p:D (2.1) BS02 PAH 4.2.1.11 GO:0000015 ... P00924 12054465
    29934 1l8q:A (2.7) BS01 ADP ? GO:0003677 ... O66659 12234917
    29935 1l8s:A (1.55) BS01 CA 3.1.1.4 GO:0002446 ... P00592 12475227
    29936 1l8s:A (1.55) BS02 PO4 3.1.1.4 GO:0002446 ... P00592 12475227
    29937 1l8s:A (1.55) BS03 PO4 3.1.1.4 GO:0002446 ... P00592 12475227
    29938 1l8s:A (1.55) BS04 ACT 3.1.1.4 GO:0002446 ... P00592 12475227
    29939 1l8s:B (1.55) BS01 PO4 3.1.1.4 GO:0002446 ... P00592 12475227
    29940 1l8s:B (1.55) BS02 CA 3.1.1.4 GO:0002446 ... P00592 12475227
    29941 1l8s:B (1.55) BS03 PO4 3.1.1.4 GO:0002446 ... P00592 12475227
    29942 1l8s:B (1.55) BS04 PO4 3.1.1.4 GO:0002446 ... P00592 12475227
    29943 1l8s:B (1.55) BS05 LPE 3.1.1.4 GO:0002446 ... P00592 12475227
    29944 1l8t:A (2.4) BS01 MG 2.7.1.95 GO:0005524 ... P0A3Y5 12006485
    29945 1l8t:A (2.4) BS02 ADP 2.7.1.95 GO:0005524 ... P0A3Y5 12006485
    29946 1l8t:A (2.4) BS03 KAN 2.7.1.95 GO:0005524 ... P0A3Y5 12006485
    29947 1l8x:B (2.7) BS01 CO 4.98.1.1 GO:0004325 ... P16622 12427010
    29948 1l9a:A (2.9) BS01 rna ? GO:0005737 ... Q58440 12086622
    29949 1l9b:C (2.4) BS01 HEM ? GO:0009055 ... P0C0X8 12051924
    29950 1l9b:L (2.4) BS01 BCL ? GO:0009772 ... P0C0Y8 12051924
    29951 1l9b:L (2.4) BS02 BCL ? GO:0009772 ... P0C0Y8 12051924
    29952 1l9b:L (2.4) BS03 BPH ? GO:0009772 ... P0C0Y8 12051924
    29953 1l9b:L (2.4) BS04 FE2 ? GO:0009772 ... P0C0Y8 12051924
    29954 1l9b:L (2.4) BS05 BCL ? GO:0009772 ... P0C0Y8 12051924
    29955 1l9b:L (2.4) BS06 BPH ? GO:0009772 ... P0C0Y8 12051924
    29956 1l9b:M (2.4) BS01 BCL ? GO:0009772 ... P0C0Y9 12051924
    29957 1l9b:M (2.4) BS02 BPH ? GO:0009772 ... P0C0Y9 12051924
    29958 1l9b:M (2.4) BS03 FE2 ? GO:0009772 ... P0C0Y9 12051924
    29959 1l9b:M (2.4) BS04 BCL ? GO:0009772 ... P0C0Y9 12051924
    29960 1l9b:M (2.4) BS05 BCL ? GO:0009772 ... P0C0Y9 12051924
    29961 1l9b:M (2.4) BS06 BPH ? GO:0009772 ... P0C0Y9 12051924
    29962 1l9b:M (2.4) BS07 U10 ? GO:0009772 ... P0C0Y9 12051924
    29963 1l9c:A (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    29964 1l9c:B (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    29965 1l9d:A (1.95) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    29966 1l9d:A (1.95) BS02 PYC 1.5.3.1 GO:0005737 ... P40859 12146941
    29967 1l9d:B (1.95) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    29968 1l9d:B (1.95) BS02 PYC 1.5.3.1 GO:0005737 ... P40859 12146941
    29969 1l9e:A (1.85) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    29970 1l9e:B (1.85) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    29971 1l9g:A (2.5) BS01 SF4 3.2.2.27 GO:0004844 ... Q9WYY1 N/A
    29972 1l9h:A (2.6) BS01 ZN ? GO:0000139 ... P02699 11972040
    29973 1l9h:A (2.6) BS02 ZN ? GO:0000139 ... P02699 11972040
    29974 1l9h:A (2.6) BS03 ZN ? GO:0000139 ... P02699 11972040
    29975 1l9h:A (2.6) BS04 RET ? GO:0000139 ... P02699 11972040
    29976 1l9h:B (2.6) BS01 ZN ? GO:0000139 ... P02699 11972040
    29977 1l9h:B (2.6) BS02 ZN ? GO:0000139 ... P02699 11972040
    29978 1l9h:B (2.6) BS03 ZN ? GO:0000139 ... P02699 11972040
    29979 1l9h:B (2.6) BS04 RET ? GO:0000139 ... P02699 11972040
    29980 1l9j:C (3.25) BS01 HEM ? GO:0009055 ... P0C0X8 12051924
    29981 1l9j:D (3.25) BS01 HEM ? GO:0009055 ... P0C0X8 12051924
    29982 1l9j:L (3.25) BS01 BCL ? GO:0009772 ... P0C0Y8 12051924
    29983 1l9j:L (3.25) BS02 BCL ? GO:0009772 ... P0C0Y8 12051924
    29984 1l9j:L (3.25) BS03 BPH ? GO:0009772 ... P0C0Y8 12051924
    29985 1l9j:L (3.25) BS04 FE2 ? GO:0009772 ... P0C0Y8 12051924
    29986 1l9j:L (3.25) BS05 BCL ? GO:0009772 ... P0C0Y8 12051924
    29987 1l9j:L (3.25) BS06 BPH ? GO:0009772 ... P0C0Y8 12051924
    29988 1l9j:M (3.25) BS01 BCL ? GO:0009772 ... P0C0Y9 12051924
    29989 1l9j:M (3.25) BS02 BPH ? GO:0009772 ... P0C0Y9 12051924
    29990 1l9j:M (3.25) BS03 FE2 ? GO:0009772 ... P0C0Y9 12051924
    29991 1l9j:M (3.25) BS04 BCL ? GO:0009772 ... P0C0Y9 12051924
    29992 1l9j:M (3.25) BS05 BCL ? GO:0009772 ... P0C0Y9 12051924
    29993 1l9j:M (3.25) BS06 BPH ? GO:0009772 ... P0C0Y9 12051924
    29994 1l9j:M (3.25) BS07 U10 ? GO:0009772 ... P0C0Y9 12051924
    29995 1l9j:R (3.25) BS01 BCL ? GO:0009772 ... P0C0Y8 12051924
    29996 1l9j:R (3.25) BS02 BCL ? GO:0009772 ... P0C0Y8 12051924
    29997 1l9j:R (3.25) BS03 BPH ? GO:0009772 ... P0C0Y8 12051924
    29998 1l9j:R (3.25) BS04 FE2 ? GO:0009772 ... P0C0Y8 12051924
    29999 1l9j:R (3.25) BS05 BCL ? GO:0009772 ... P0C0Y8 12051924
    30000 1l9j:R (3.25) BS06 BPH ? GO:0009772 ... P0C0Y8 12051924

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).