SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    300201 4w2h:BE (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 25306919
    300202 4w2h:BE (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 25306919
    300203 4w2h:BF (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 25306919
    300204 4w2h:BF (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 25306919
    300205 4w2h:BF (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 25306919
    300206 4w2h:BF (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 25306919
    300207 4w2h:BF (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 25306919
    300208 4w2h:BF (2.7) BS06 MG ? GO:0003735 ... Q5SHN9 25306919
    300209 4w2h:BF (2.7) BS07 MG ? GO:0003735 ... Q5SHN9 25306919
    300210 4w2h:BF (2.7) BS08 MG ? GO:0003735 ... Q5SHN9 25306919
    300211 4w2h:BF (2.7) BS09 MG ? GO:0003735 ... Q5SHN9 25306919
    300212 4w2h:BF (2.7) BS10 MG ? GO:0003735 ... Q5SHN9 25306919
    300213 4w2h:BG (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 25306919
    300214 4w2h:BG (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 25306919
    300215 4w2h:BG (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 25306919
    300216 4w2h:BG (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 25306919
    300217 4w2h:BH (2.7) BS01 rna N/A GO:0003735 ... N/A 25306919
    300218 4w2h:BI (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 25306919
    300219 4w2h:BN (2.7) BS01 rna ? GO:0003729 ... P60488 25306919
    300220 4w2h:BN (2.7) BS02 MG ? GO:0003729 ... P60488 25306919
    300221 4w2h:BN (2.7) BS03 MG ? GO:0003729 ... P60488 25306919
    300222 4w2h:BN (2.7) BS04 MG ? GO:0003729 ... P60488 25306919
    300223 4w2h:BO (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 25306919
    300224 4w2h:BO (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 25306919
    300225 4w2h:BP (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 25306919
    300226 4w2h:BP (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 25306919
    300227 4w2h:BP (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 25306919
    300228 4w2h:BQ (2.7) BS01 rna ? GO:0000049 ... P60489 25306919
    300229 4w2h:BQ (2.7) BS02 rna ? GO:0000049 ... P60489 25306919
    300230 4w2h:BQ (2.7) BS03 MG ? GO:0000049 ... P60489 25306919
    300231 4w2h:BQ (2.7) BS04 MG ? GO:0000049 ... P60489 25306919
    300232 4w2h:BQ (2.7) BS05 MG ? GO:0000049 ... P60489 25306919
    300233 4w2h:BQ (2.7) BS06 MG ? GO:0000049 ... P60489 25306919
    300234 4w2h:BR (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 25306919
    300235 4w2h:BR (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 25306919
    300236 4w2h:BS (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 25306919
    300237 4w2h:BS (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 25306919
    300238 4w2h:BT (2.7) BS01 rna ? GO:0003735 ... P60490 25306919
    300239 4w2h:BT (2.7) BS02 rna ? GO:0003735 ... P60490 25306919
    300240 4w2h:BU (2.7) BS01 rna ? GO:0000027 ... P60491 25306919
    300241 4w2h:BU (2.7) BS02 MG ? GO:0000027 ... P60491 25306919
    300242 4w2h:BU (2.7) BS03 MG ? GO:0000027 ... P60491 25306919
    300243 4w2h:BU (2.7) BS04 MG ? GO:0000027 ... P60491 25306919
    300244 4w2h:BU (2.7) BS05 MG ? GO:0000027 ... P60491 25306919
    300245 4w2h:BU (2.7) BS06 MG ? GO:0000027 ... P60491 25306919
    300246 4w2h:BU (2.7) BS07 MG ? GO:0000027 ... P60491 25306919
    300247 4w2h:BV (2.7) BS01 rna ? GO:0003723 ... P60492 25306919
    300248 4w2h:BV (2.7) BS02 MG ? GO:0003723 ... P60492 25306919
    300249 4w2h:BV (2.7) BS03 MG ? GO:0003723 ... P60492 25306919
    300250 4w2h:BV (2.7) BS04 MG ? GO:0003723 ... P60492 25306919
    300251 4w2h:BV (2.7) BS05 MG ? GO:0003723 ... P60492 25306919
    300252 4w2h:BW (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 25306919
    300253 4w2h:BW (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 25306919
    300254 4w2h:BW (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 25306919
    300255 4w2h:BW (2.7) BS04 MG ? GO:0003735 ... Q5SHP3 25306919
    300256 4w2h:BX (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 25306919
    300257 4w2h:BX (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 25306919
    300258 4w2h:BX (2.7) BS03 MG ? GO:0003735 ... Q5SHP0 25306919
    300259 4w2h:BY (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 25306919
    300260 4w2h:BY (2.7) BS02 ZN ? GO:0003723 ... Q5SHP9 25306919
    300261 4w2h:BZ (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 25306919
    300262 4w2h:BZ (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 25306919
    300263 4w2h:CB (2.7) BS01 rna ? GO:0003735 ... P80371 25306919
    300264 4w2h:CC (2.7) BS01 rna ? GO:0003676 ... P80372 25306919
    300265 4w2h:CD (2.7) BS01 rna ? GO:0003723 ... P80373 25306919
    300266 4w2h:CD (2.7) BS02 SF4 ? GO:0003723 ... P80373 25306919
    300267 4w2h:CE (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 25306919
    300268 4w2h:CE (2.7) BS02 MG ? GO:0003723 ... Q5SHQ5 25306919
    300269 4w2h:CE (2.7) BS03 MG ? GO:0003723 ... Q5SHQ5 25306919
    300270 4w2h:CF (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 25306919
    300271 4w2h:CF (2.7) BS02 MG ? GO:0003735 ... Q5SLP8 25306919
    300272 4w2h:CG (2.7) BS01 rna ? GO:0000049 ... P17291 25306919
    300273 4w2h:CH (2.7) BS01 rna N/A GO:0003735 ... N/A 25306919
    300274 4w2h:CI (2.7) BS01 rna ? GO:0000049 ... P80374 25306919
    300275 4w2h:CI (2.7) BS02 rna ? GO:0000049 ... P80374 25306919
    300276 4w2h:CJ (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 25306919
    300277 4w2h:CK (2.7) BS01 rna ? GO:0003735 ... P80376 25306919
    300278 4w2h:CK (2.7) BS02 MG ? GO:0003735 ... P80376 25306919
    300279 4w2h:CL (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 25306919
    300280 4w2h:CM (2.7) BS01 rna ? GO:0000049 ... P80377 25306919
    300281 4w2h:CM (2.7) BS02 rna ? GO:0000049 ... P80377 25306919
    300282 4w2h:CN (2.7) BS01 rna N/A GO:0003735 ... N/A 25306919
    300283 4w2h:CN (2.7) BS02 ZN N/A GO:0003735 ... N/A 25306919
    300284 4w2h:CO (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 25306919
    300285 4w2h:CO (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 25306919
    300286 4w2h:CP (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 25306919
    300287 4w2h:CQ (2.7) BS01 rna N/A GO:0003735 ... N/A 25306919
    300288 4w2h:CR (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 25306919
    300289 4w2h:CS (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 25306919
    300290 4w2h:CT (2.7) BS01 rna ? GO:0003723 ... P80380 25306919
    300291 4w2h:D0 (2.7) BS01 rna ? GO:0003735 ... P60493 25306919
    300292 4w2h:D0 (2.7) BS02 rna ? GO:0003735 ... P60493 25306919
    300293 4w2h:D0 (2.7) BS03 rna ? GO:0003735 ... P60493 25306919
    300294 4w2h:D1 (2.7) BS01 rna ? GO:0003735 ... P60494 25306919
    300295 4w2h:D1 (2.7) BS02 rna ? GO:0003735 ... P60494 25306919
    300296 4w2h:D2 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 25306919
    300297 4w2h:D3 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 25306919
    300298 4w2h:D3 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 25306919
    300299 4w2h:D3 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 25306919
    300300 4w2h:D4 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 25306919
    300301 4w2h:D4 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 25306919
    300302 4w2h:D5 (2.7) BS01 rna ? GO:0003735 ... P80339 25306919
    300303 4w2h:D5 (2.7) BS02 ZN ? GO:0003735 ... P80339 25306919
    300304 4w2h:D6 (2.7) BS01 rna ? GO:0000049 ... P35871 25306919
    300305 4w2h:D6 (2.7) BS02 ZN ? GO:0000049 ... P35871 25306919
    300306 4w2h:D7 (2.7) BS01 rna ? GO:0003735 ... P80340 25306919
    300307 4w2h:D8 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 25306919
    300308 4w2h:D9 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 25306919
    300309 4w2h:D9 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 25306919
    300310 4w2h:DD (2.7) BS01 rna ? GO:0002181 ... P60405 25306919
    300311 4w2h:DD (2.7) BS02 rna ? GO:0002181 ... P60405 25306919
    300312 4w2h:DD (2.7) BS03 MG ? GO:0002181 ... P60405 25306919
    300313 4w2h:DD (2.7) BS04 MG ? GO:0002181 ... P60405 25306919
    300314 4w2h:DD (2.7) BS05 MG ? GO:0002181 ... P60405 25306919
    300315 4w2h:DD (2.7) BS06 MG ? GO:0002181 ... P60405 25306919
    300316 4w2h:DD (2.7) BS07 MG ? GO:0002181 ... P60405 25306919
    300317 4w2h:DD (2.7) BS08 MG ? GO:0002181 ... P60405 25306919
    300318 4w2h:DD (2.7) BS09 MG ? GO:0002181 ... P60405 25306919
    300319 4w2h:DE (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 25306919
    300320 4w2h:DE (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 25306919
    300321 4w2h:DF (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 25306919
    300322 4w2h:DF (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 25306919
    300323 4w2h:DF (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 25306919
    300324 4w2h:DF (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 25306919
    300325 4w2h:DF (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 25306919
    300326 4w2h:DG (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 25306919
    300327 4w2h:DG (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 25306919
    300328 4w2h:DG (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 25306919
    300329 4w2h:DH (2.7) BS01 rna N/A GO:0003735 ... N/A 25306919
    300330 4w2h:DI (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 25306919
    300331 4w2h:DN (2.7) BS01 rna ? GO:0003729 ... P60488 25306919
    300332 4w2h:DO (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 25306919
    300333 4w2h:DO (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 25306919
    300334 4w2h:DP (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 25306919
    300335 4w2h:DP (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 25306919
    300336 4w2h:DQ (2.7) BS01 rna ? GO:0000049 ... P60489 25306919
    300337 4w2h:DQ (2.7) BS02 rna ? GO:0000049 ... P60489 25306919
    300338 4w2h:DQ (2.7) BS03 MG ? GO:0000049 ... P60489 25306919
    300339 4w2h:DQ (2.7) BS04 MG ? GO:0000049 ... P60489 25306919
    300340 4w2h:DQ (2.7) BS05 MG ? GO:0000049 ... P60489 25306919
    300341 4w2h:DR (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 25306919
    300342 4w2h:DS (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 25306919
    300343 4w2h:DS (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 25306919
    300344 4w2h:DT (2.7) BS01 rna ? GO:0003735 ... P60490 25306919
    300345 4w2h:DT (2.7) BS02 rna ? GO:0003735 ... P60490 25306919
    300346 4w2h:DU (2.7) BS01 rna ? GO:0000027 ... P60491 25306919
    300347 4w2h:DU (2.7) BS02 MG ? GO:0000027 ... P60491 25306919
    300348 4w2h:DU (2.7) BS03 MG ? GO:0000027 ... P60491 25306919
    300349 4w2h:DU (2.7) BS04 MG ? GO:0000027 ... P60491 25306919
    300350 4w2h:DV (2.7) BS01 rna ? GO:0003723 ... P60492 25306919
    300351 4w2h:DV (2.7) BS02 MG ? GO:0003723 ... P60492 25306919
    300352 4w2h:DV (2.7) BS03 MG ? GO:0003723 ... P60492 25306919
    300353 4w2h:DV (2.7) BS04 MG ? GO:0003723 ... P60492 25306919
    300354 4w2h:DW (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 25306919
    300355 4w2h:DW (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 25306919
    300356 4w2h:DW (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 25306919
    300357 4w2h:DX (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 25306919
    300358 4w2h:DY (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 25306919
    300359 4w2h:DY (2.7) BS02 ZN ? GO:0003723 ... Q5SHP9 25306919
    300360 4w2h:DZ (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 25306919
    300361 4w2h:DZ (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 25306919
    300362 4w2i:AB (2.7) BS01 rna ? GO:0003735 ... P80371 25306922
    300363 4w2i:AC (2.7) BS01 rna ? GO:0003729 ... P80372 25306922
    300364 4w2i:AD (2.7) BS01 rna ? GO:0003735 ... P80373 25306922
    300365 4w2i:AD (2.7) BS02 SF4 ? GO:0003735 ... P80373 25306922
    300366 4w2i:AE (2.7) BS01 rna ? GO:0005840 ... Q5SHQ5 25306922
    300367 4w2i:AE (2.7) BS02 MG ? GO:0005840 ... Q5SHQ5 25306922
    300368 4w2i:AE (2.7) BS03 MG ? GO:0005840 ... Q5SHQ5 25306922
    300369 4w2i:AF (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 25306922
    300370 4w2i:AG (2.7) BS01 rna ? GO:0000049 ... P17291 25306922
    300371 4w2i:AG (2.7) BS02 rna ? GO:0000049 ... P17291 25306922
    300372 4w2i:AH (2.7) BS01 rna N/A N/A N/A 25306922
    300373 4w2i:AI (2.7) BS01 rna ? GO:0000049 ... P80374 25306922
    300374 4w2i:AJ (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 25306922
    300375 4w2i:AK (2.7) BS01 rna ? GO:0005840 ... P80376 25306922
    300376 4w2i:AK (2.7) BS02 MG ? GO:0005840 ... P80376 25306922
    300377 4w2i:AL (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 25306922
    300378 4w2i:AL (2.7) BS02 MG ? GO:0000049 ... Q5SHN3 25306922
    300379 4w2i:AM (2.7) BS01 rna ? GO:0000049 ... P80377 25306922
    300380 4w2i:AM (2.7) BS02 rna ? GO:0000049 ... P80377 25306922
    300381 4w2i:AM (2.7) BS03 rna ? GO:0000049 ... P80377 25306922
    300382 4w2i:AM (2.7) BS04 MG ? GO:0000049 ... P80377 25306922
    300383 4w2i:AN (2.7) BS01 rna N/A N/A N/A 25306922
    300384 4w2i:AN (2.7) BS02 ZN N/A N/A N/A 25306922
    300385 4w2i:AO (2.7) BS01 rna ? GO:0005737 ... Q5SJ76 25306922
    300386 4w2i:AO (2.7) BS02 rna ? GO:0005737 ... Q5SJ76 25306922
    300387 4w2i:AP (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 25306922
    300388 4w2i:AQ (2.7) BS01 rna N/A N/A N/A 25306922
    300389 4w2i:AR (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 25306922
    300390 4w2i:AS (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 25306922
    300391 4w2i:AT (2.7) BS01 rna ? GO:0005840 ... P80380 25306922
    300392 4w2i:B0 (2.7) BS01 rna ? GO:0003735 ... P60493 25306922
    300393 4w2i:B0 (2.7) BS02 rna ? GO:0003735 ... P60493 25306922
    300394 4w2i:B0 (2.7) BS03 MG ? GO:0003735 ... P60493 25306922
    300395 4w2i:B1 (2.7) BS01 rna ? GO:0005840 ... P60494 25306922
    300396 4w2i:B1 (2.7) BS02 rna ? GO:0005840 ... P60494 25306922
    300397 4w2i:B1 (2.7) BS03 MG ? GO:0005840 ... P60494 25306922
    300398 4w2i:B2 (2.7) BS01 rna ? GO:0005840 ... Q5SHP6 25306922
    300399 4w2i:B3 (2.7) BS01 rna ? GO:0005840 ... Q5SHQ6 25306922
    300400 4w2i:B3 (2.7) BS02 rna ? GO:0005840 ... Q5SHQ6 25306922

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).