SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    300401 4w2i:B3 (2.7) BS03 MG ? GO:0005840 ... Q5SHQ6 25306922
    300402 4w2i:B4 (2.7) BS01 rna ? GO:0005840 ... Q5SJE1 25306922
    300403 4w2i:B4 (2.7) BS02 ZN ? GO:0005840 ... Q5SJE1 25306922
    300404 4w2i:B5 (2.7) BS01 rna ? GO:0005840 ... P80339 25306922
    300405 4w2i:B5 (2.7) BS02 MG ? GO:0005840 ... P80339 25306922
    300406 4w2i:B5 (2.7) BS03 MG ? GO:0005840 ... P80339 25306922
    300407 4w2i:B5 (2.7) BS04 ZN ? GO:0005840 ... P80339 25306922
    300408 4w2i:B6 (2.7) BS01 rna ? GO:0000049 ... P35871 25306922
    300409 4w2i:B6 (2.7) BS02 ZN ? GO:0000049 ... P35871 25306922
    300410 4w2i:B7 (2.7) BS01 rna ? GO:0005840 ... P80340 25306922
    300411 4w2i:B7 (2.7) BS02 MG ? GO:0005840 ... P80340 25306922
    300412 4w2i:B7 (2.7) BS03 MG ? GO:0005840 ... P80340 25306922
    300413 4w2i:B7 (2.7) BS04 MG ? GO:0005840 ... P80340 25306922
    300414 4w2i:B8 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 25306922
    300415 4w2i:B8 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 25306922
    300416 4w2i:B9 (2.7) BS01 rna ? GO:0005737 ... Q5SHR2 25306922
    300417 4w2i:B9 (2.7) BS02 ZN ? GO:0005737 ... Q5SHR2 25306922
    300418 4w2i:BD (2.7) BS01 rna ? GO:0002181 ... P60405 25306922
    300419 4w2i:BD (2.7) BS02 rna ? GO:0002181 ... P60405 25306922
    300420 4w2i:BD (2.7) BS03 MG ? GO:0002181 ... P60405 25306922
    300421 4w2i:BD (2.7) BS04 MG ? GO:0002181 ... P60405 25306922
    300422 4w2i:BD (2.7) BS05 MG ? GO:0002181 ... P60405 25306922
    300423 4w2i:BD (2.7) BS06 MG ? GO:0002181 ... P60405 25306922
    300424 4w2i:BD (2.7) BS07 MG ? GO:0002181 ... P60405 25306922
    300425 4w2i:BD (2.7) BS08 MG ? GO:0002181 ... P60405 25306922
    300426 4w2i:BD (2.7) BS09 MG ? GO:0002181 ... P60405 25306922
    300427 4w2i:BD (2.7) BS10 MG ? GO:0002181 ... P60405 25306922
    300428 4w2i:BD (2.7) BS11 MG ? GO:0002181 ... P60405 25306922
    300429 4w2i:BD (2.7) BS12 MG ? GO:0002181 ... P60405 25306922
    300430 4w2i:BD (2.7) BS13 MG ? GO:0002181 ... P60405 25306922
    300431 4w2i:BE (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 25306922
    300432 4w2i:BE (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 25306922
    300433 4w2i:BE (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 25306922
    300434 4w2i:BE (2.7) BS04 MG ? GO:0003735 ... Q5SHN8 25306922
    300435 4w2i:BF (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 25306922
    300436 4w2i:BF (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 25306922
    300437 4w2i:BF (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 25306922
    300438 4w2i:BF (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 25306922
    300439 4w2i:BF (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 25306922
    300440 4w2i:BF (2.7) BS06 MG ? GO:0003735 ... Q5SHN9 25306922
    300441 4w2i:BF (2.7) BS07 MG ? GO:0003735 ... Q5SHN9 25306922
    300442 4w2i:BF (2.7) BS08 MG ? GO:0003735 ... Q5SHN9 25306922
    300443 4w2i:BF (2.7) BS09 MG ? GO:0003735 ... Q5SHN9 25306922
    300444 4w2i:BG (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 25306922
    300445 4w2i:BG (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 25306922
    300446 4w2i:BG (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 25306922
    300447 4w2i:BG (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 25306922
    300448 4w2i:BH (2.7) BS01 rna N/A N/A N/A 25306922
    300449 4w2i:BI (2.7) BS01 rna ? GO:0005840 ... Q5SLQ1 25306922
    300450 4w2i:BN (2.7) BS01 rna ? GO:0003729 ... P60488 25306922
    300451 4w2i:BN (2.7) BS02 MG ? GO:0003729 ... P60488 25306922
    300452 4w2i:BN (2.7) BS03 MG ? GO:0003729 ... P60488 25306922
    300453 4w2i:BN (2.7) BS04 MG ? GO:0003729 ... P60488 25306922
    300454 4w2i:BO (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 25306922
    300455 4w2i:BO (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 25306922
    300456 4w2i:BP (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 25306922
    300457 4w2i:BP (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 25306922
    300458 4w2i:BP (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 25306922
    300459 4w2i:BQ (2.7) BS01 rna ? GO:0000049 ... P60489 25306922
    300460 4w2i:BQ (2.7) BS02 rna ? GO:0000049 ... P60489 25306922
    300461 4w2i:BQ (2.7) BS03 rna ? GO:0000049 ... P60489 25306922
    300462 4w2i:BQ (2.7) BS04 MG ? GO:0000049 ... P60489 25306922
    300463 4w2i:BQ (2.7) BS05 MG ? GO:0000049 ... P60489 25306922
    300464 4w2i:BQ (2.7) BS06 MG ? GO:0000049 ... P60489 25306922
    300465 4w2i:BR (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 25306922
    300466 4w2i:BR (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 25306922
    300467 4w2i:BS (2.7) BS01 rna ? GO:0005737 ... Q5SHQ4 25306922
    300468 4w2i:BS (2.7) BS02 rna ? GO:0005737 ... Q5SHQ4 25306922
    300469 4w2i:BT (2.7) BS01 rna ? GO:0003735 ... P60490 25306922
    300470 4w2i:BT (2.7) BS02 rna ? GO:0003735 ... P60490 25306922
    300471 4w2i:BU (2.7) BS01 rna ? GO:0000027 ... P60491 25306922
    300472 4w2i:BU (2.7) BS02 MG ? GO:0000027 ... P60491 25306922
    300473 4w2i:BU (2.7) BS03 MG ? GO:0000027 ... P60491 25306922
    300474 4w2i:BU (2.7) BS04 MG ? GO:0000027 ... P60491 25306922
    300475 4w2i:BU (2.7) BS05 MG ? GO:0000027 ... P60491 25306922
    300476 4w2i:BU (2.7) BS06 MG ? GO:0000027 ... P60491 25306922
    300477 4w2i:BU (2.7) BS07 MG ? GO:0000027 ... P60491 25306922
    300478 4w2i:BU (2.7) BS08 MG ? GO:0000027 ... P60491 25306922
    300479 4w2i:BU (2.7) BS09 MG ? GO:0000027 ... P60491 25306922
    300480 4w2i:BV (2.7) BS01 rna ? GO:0003735 ... P60492 25306922
    300481 4w2i:BV (2.7) BS02 MG ? GO:0003735 ... P60492 25306922
    300482 4w2i:BV (2.7) BS03 MG ? GO:0003735 ... P60492 25306922
    300483 4w2i:BV (2.7) BS04 MG ? GO:0003735 ... P60492 25306922
    300484 4w2i:BV (2.7) BS05 MG ? GO:0003735 ... P60492 25306922
    300485 4w2i:BV (2.7) BS06 MG ? GO:0003735 ... P60492 25306922
    300486 4w2i:BV (2.7) BS07 MG ? GO:0003735 ... P60492 25306922
    300487 4w2i:BW (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 25306922
    300488 4w2i:BW (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 25306922
    300489 4w2i:BW (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 25306922
    300490 4w2i:BX (2.7) BS01 rna ? GO:0005840 ... Q5SHP0 25306922
    300491 4w2i:BX (2.7) BS02 MG ? GO:0005840 ... Q5SHP0 25306922
    300492 4w2i:BX (2.7) BS03 MG ? GO:0005840 ... Q5SHP0 25306922
    300493 4w2i:BY (2.7) BS01 rna ? GO:0005840 ... Q5SHP9 25306922
    300494 4w2i:BY (2.7) BS02 ZN ? GO:0005840 ... Q5SHP9 25306922
    300495 4w2i:BZ (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 25306922
    300496 4w2i:BZ (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 25306922
    300497 4w2i:CB (2.7) BS01 rna ? GO:0003735 ... P80371 25306922
    300498 4w2i:CC (2.7) BS01 rna ? GO:0003729 ... P80372 25306922
    300499 4w2i:CD (2.7) BS01 rna ? GO:0003735 ... P80373 25306922
    300500 4w2i:CD (2.7) BS02 SF4 ? GO:0003735 ... P80373 25306922
    300501 4w2i:CE (2.7) BS01 rna ? GO:0005840 ... Q5SHQ5 25306922
    300502 4w2i:CE (2.7) BS02 MG ? GO:0005840 ... Q5SHQ5 25306922
    300503 4w2i:CE (2.7) BS03 MG ? GO:0005840 ... Q5SHQ5 25306922
    300504 4w2i:CF (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 25306922
    300505 4w2i:CG (2.7) BS01 rna ? GO:0000049 ... P17291 25306922
    300506 4w2i:CG (2.7) BS02 rna ? GO:0000049 ... P17291 25306922
    300507 4w2i:CH (2.7) BS01 rna N/A N/A N/A 25306922
    300508 4w2i:CI (2.7) BS01 rna ? GO:0000049 ... P80374 25306922
    300509 4w2i:CI (2.7) BS02 rna ? GO:0000049 ... P80374 25306922
    300510 4w2i:CJ (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 25306922
    300511 4w2i:CJ (2.7) BS02 MG ? GO:0000049 ... Q5SHN7 25306922
    300512 4w2i:CK (2.7) BS01 rna ? GO:0005840 ... P80376 25306922
    300513 4w2i:CK (2.7) BS02 MG ? GO:0005840 ... P80376 25306922
    300514 4w2i:CL (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 25306922
    300515 4w2i:CL (2.7) BS02 rna ? GO:0000049 ... Q5SHN3 25306922
    300516 4w2i:CL (2.7) BS03 MG ? GO:0000049 ... Q5SHN3 25306922
    300517 4w2i:CM (2.7) BS01 rna ? GO:0000049 ... P80377 25306922
    300518 4w2i:CM (2.7) BS02 rna ? GO:0000049 ... P80377 25306922
    300519 4w2i:CN (2.7) BS01 rna N/A N/A N/A 25306922
    300520 4w2i:CN (2.7) BS02 ZN N/A N/A N/A 25306922
    300521 4w2i:CO (2.7) BS01 rna ? GO:0005737 ... Q5SJ76 25306922
    300522 4w2i:CO (2.7) BS02 rna ? GO:0005737 ... Q5SJ76 25306922
    300523 4w2i:CP (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 25306922
    300524 4w2i:CQ (2.7) BS01 rna N/A N/A N/A 25306922
    300525 4w2i:CR (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 25306922
    300526 4w2i:CS (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 25306922
    300527 4w2i:CT (2.7) BS01 rna ? GO:0005840 ... P80380 25306922
    300528 4w2i:CT (2.7) BS02 MG ? GO:0005840 ... P80380 25306922
    300529 4w2i:D0 (2.7) BS01 rna ? GO:0003735 ... P60493 25306922
    300530 4w2i:D0 (2.7) BS02 rna ? GO:0003735 ... P60493 25306922
    300531 4w2i:D0 (2.7) BS03 rna ? GO:0003735 ... P60493 25306922
    300532 4w2i:D1 (2.7) BS01 rna ? GO:0005840 ... P60494 25306922
    300533 4w2i:D1 (2.7) BS02 rna ? GO:0005840 ... P60494 25306922
    300534 4w2i:D2 (2.7) BS01 rna ? GO:0005840 ... Q5SHP6 25306922
    300535 4w2i:D3 (2.7) BS01 rna ? GO:0005840 ... Q5SHQ6 25306922
    300536 4w2i:D3 (2.7) BS02 rna ? GO:0005840 ... Q5SHQ6 25306922
    300537 4w2i:D3 (2.7) BS03 MG ? GO:0005840 ... Q5SHQ6 25306922
    300538 4w2i:D4 (2.7) BS01 rna ? GO:0005840 ... Q5SJE1 25306922
    300539 4w2i:D4 (2.7) BS02 ZN ? GO:0005840 ... Q5SJE1 25306922
    300540 4w2i:D5 (2.7) BS01 rna ? GO:0005840 ... P80339 25306922
    300541 4w2i:D5 (2.7) BS02 ZN ? GO:0005840 ... P80339 25306922
    300542 4w2i:D6 (2.7) BS01 rna ? GO:0000049 ... P35871 25306922
    300543 4w2i:D6 (2.7) BS02 ZN ? GO:0000049 ... P35871 25306922
    300544 4w2i:D7 (2.7) BS01 rna ? GO:0005840 ... P80340 25306922
    300545 4w2i:D7 (2.7) BS02 MG ? GO:0005840 ... P80340 25306922
    300546 4w2i:D7 (2.7) BS03 MG ? GO:0005840 ... P80340 25306922
    300547 4w2i:D8 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 25306922
    300548 4w2i:D9 (2.7) BS01 rna ? GO:0005737 ... Q5SHR2 25306922
    300549 4w2i:D9 (2.7) BS02 ZN ? GO:0005737 ... Q5SHR2 25306922
    300550 4w2i:DD (2.7) BS01 rna ? GO:0002181 ... P60405 25306922
    300551 4w2i:DD (2.7) BS02 rna ? GO:0002181 ... P60405 25306922
    300552 4w2i:DD (2.7) BS03 MG ? GO:0002181 ... P60405 25306922
    300553 4w2i:DD (2.7) BS04 MG ? GO:0002181 ... P60405 25306922
    300554 4w2i:DD (2.7) BS05 MG ? GO:0002181 ... P60405 25306922
    300555 4w2i:DD (2.7) BS06 MG ? GO:0002181 ... P60405 25306922
    300556 4w2i:DD (2.7) BS07 MG ? GO:0002181 ... P60405 25306922
    300557 4w2i:DD (2.7) BS08 MG ? GO:0002181 ... P60405 25306922
    300558 4w2i:DD (2.7) BS09 MG ? GO:0002181 ... P60405 25306922
    300559 4w2i:DD (2.7) BS10 MG ? GO:0002181 ... P60405 25306922
    300560 4w2i:DE (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 25306922
    300561 4w2i:DE (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 25306922
    300562 4w2i:DE (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 25306922
    300563 4w2i:DF (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 25306922
    300564 4w2i:DF (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 25306922
    300565 4w2i:DF (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 25306922
    300566 4w2i:DF (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 25306922
    300567 4w2i:DF (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 25306922
    300568 4w2i:DG (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 25306922
    300569 4w2i:DG (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 25306922
    300570 4w2i:DG (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 25306922
    300571 4w2i:DG (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 25306922
    300572 4w2i:DH (2.7) BS01 rna N/A N/A N/A 25306922
    300573 4w2i:DI (2.7) BS01 rna ? GO:0005840 ... Q5SLQ1 25306922
    300574 4w2i:DN (2.7) BS01 rna ? GO:0003729 ... P60488 25306922
    300575 4w2i:DO (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 25306922
    300576 4w2i:DO (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 25306922
    300577 4w2i:DO (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 25306922
    300578 4w2i:DP (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 25306922
    300579 4w2i:DP (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 25306922
    300580 4w2i:DQ (2.7) BS01 rna ? GO:0000049 ... P60489 25306922
    300581 4w2i:DQ (2.7) BS02 rna ? GO:0000049 ... P60489 25306922
    300582 4w2i:DQ (2.7) BS03 rna ? GO:0000049 ... P60489 25306922
    300583 4w2i:DQ (2.7) BS04 MG ? GO:0000049 ... P60489 25306922
    300584 4w2i:DQ (2.7) BS05 MG ? GO:0000049 ... P60489 25306922
    300585 4w2i:DQ (2.7) BS06 MG ? GO:0000049 ... P60489 25306922
    300586 4w2i:DR (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 25306922
    300587 4w2i:DS (2.7) BS01 rna ? GO:0005737 ... Q5SHQ4 25306922
    300588 4w2i:DS (2.7) BS02 rna ? GO:0005737 ... Q5SHQ4 25306922
    300589 4w2i:DT (2.7) BS01 rna ? GO:0003735 ... P60490 25306922
    300590 4w2i:DT (2.7) BS02 rna ? GO:0003735 ... P60490 25306922
    300591 4w2i:DU (2.7) BS01 rna ? GO:0000027 ... P60491 25306922
    300592 4w2i:DU (2.7) BS02 MG ? GO:0000027 ... P60491 25306922
    300593 4w2i:DU (2.7) BS03 MG ? GO:0000027 ... P60491 25306922
    300594 4w2i:DU (2.7) BS04 MG ? GO:0000027 ... P60491 25306922
    300595 4w2i:DV (2.7) BS01 rna ? GO:0003735 ... P60492 25306922
    300596 4w2i:DV (2.7) BS02 MG ? GO:0003735 ... P60492 25306922
    300597 4w2i:DV (2.7) BS03 MG ? GO:0003735 ... P60492 25306922
    300598 4w2i:DV (2.7) BS04 MG ? GO:0003735 ... P60492 25306922
    300599 4w2i:DW (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 25306922
    300600 4w2i:DW (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 25306922

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).