SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1498 1499 1500 1501 1502 1503 1504 1505 1506 1507 1508 1509 1510 1511 1512 1513 1514 1515 1516 1517 1518 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    301401 4wf1:B4 (3.09) BS01 rna ? GO:0002181 ... P0A7Q6 25368144
    301402 4wf1:B4 (3.09) BS02 ZN ? GO:0002181 ... P0A7Q6 25368144
    301403 4wf1:B5 (3.09) BS01 rna ? GO:0000049 ... Q5SLP7 25368144
    301404 4wf1:BC (3.09) BS01 rna ? GO:0000027 ... P60422 25368144
    301405 4wf1:BD (3.09) BS01 rna ? GO:0000027 ... P60438 25368144
    301406 4wf1:BE (3.09) BS01 rna ? GO:0001070 ... P60723 25368144
    301407 4wf1:BF (3.09) BS01 rna ? GO:0000027 ... P62399 25368144
    301408 4wf1:BF (3.09) BS02 rna ? GO:0000027 ... P62399 25368144
    301409 4wf1:BG (3.09) BS01 rna ? GO:0000027 ... P0AG55 25368144
    301410 4wf1:BH (3.09) BS01 rna ? GO:0002181 ... P0A7R1 25368144
    301411 4wf1:BH (3.09) BS02 rna ? GO:0002181 ... P0A7R1 25368144
    301412 4wf1:BI (3.09) BS01 rna ? GO:0000027 ... P0A7J7 25368144
    301413 4wf1:BJ (3.09) BS01 rna ? GO:0002181 ... P0AA10 25368144
    301414 4wf1:BK (3.09) BS01 rna ? GO:0002181 ... P0ADY3 25368144
    301415 4wf1:BK (3.09) BS02 rna ? GO:0002181 ... P0ADY3 25368144
    301416 4wf1:BL (3.09) BS01 rna ? GO:0002181 ... P02413 25368144
    301417 4wf1:BM (3.09) BS01 rna ? GO:0000027 ... P0ADY7 25368144
    301418 4wf1:BM (3.09) BS02 rna ? GO:0000027 ... P0ADY7 25368144
    301419 4wf1:BN (3.09) BS01 rna ? GO:0000027 ... P0AG44 25368144
    301420 4wf1:BO (3.09) BS01 rna ? GO:0002181 ... P0C018 25368144
    301421 4wf1:BO (3.09) BS02 rna ? GO:0002181 ... P0C018 25368144
    301422 4wf1:BP (3.09) BS01 rna ? GO:0000027 ... P0A7K6 25368144
    301423 4wf1:BP (3.09) BS02 rna ? GO:0000027 ... P0A7K6 25368144
    301424 4wf1:BQ (3.09) BS01 rna ? GO:0000027 ... P0A7L3 25368144
    301425 4wf1:BR (3.09) BS01 rna ? GO:0002181 ... P0AG48 25368144
    301426 4wf1:BS (3.09) BS01 rna ? GO:0002181 ... P61175 25368144
    301427 4wf1:BT (3.09) BS01 rna ? GO:0000027 ... P0ADZ0 25368144
    301428 4wf1:BU (3.09) BS01 rna ? GO:0000027 ... P60624 25368144
    301429 4wf1:BV (3.09) BS01 rna ? GO:0000027 ... P68919 25368144
    301430 4wf1:BV (3.09) BS02 rna ? GO:0000027 ... P68919 25368144
    301431 4wf1:BW (3.09) BS01 rna ? GO:0003735 ... P0A7L8 25368144
    301432 4wf1:BW (3.09) BS02 rna ? GO:0003735 ... P0A7L8 25368144
    301433 4wf1:BX (3.09) BS01 rna ? GO:0000027 ... P0A7M2 25368144
    301434 4wf1:BY (3.09) BS01 rna ? GO:0000027 ... P0A7M6 25368144
    301435 4wf1:BZ (3.09) BS01 rna ? GO:0000027 ... P0AG51 25368144
    301436 4wf1:CB (3.09) BS01 rna ? GO:0000028 ... P0A7V0 25368144
    301437 4wf1:CB (3.09) BS02 rna ? GO:0000028 ... P0A7V0 25368144
    301438 4wf1:CC (3.09) BS01 rna ? GO:0003676 ... P0A7V3 25368144
    301439 4wf1:CD (3.09) BS01 rna ? GO:0000028 ... P0A7V8 25368144
    301440 4wf1:CD (3.09) BS02 rna ? GO:0000028 ... P0A7V8 25368144
    301441 4wf1:CE (3.09) BS01 rna ? GO:0000028 ... P0A7W1 25368144
    301442 4wf1:CF (3.09) BS01 rna ? GO:0003735 ... P02358 25368144
    301443 4wf1:CG (3.09) BS01 rna ? GO:0003723 ... P02359 25368144
    301444 4wf1:CH (3.09) BS01 rna ? GO:0000028 ... P0A7W7 25368144
    301445 4wf1:CI (3.09) BS01 rna ? GO:0000049 ... P0A7X3 25368144
    301446 4wf1:CJ (3.09) BS01 rna ? GO:0000049 ... P0A7R5 25368144
    301447 4wf1:CK (3.09) BS01 rna ? GO:0002181 ... P0A7R9 25368144
    301448 4wf1:CL (3.09) BS01 rna ? GO:0000049 ... P0A7S3 25368144
    301449 4wf1:CM (3.09) BS01 rna ? GO:0000049 ... P0A7S9 25368144
    301450 4wf1:CN (3.09) BS01 rna ? GO:0000028 ... P0AG59 25368144
    301451 4wf1:CO (3.09) BS01 rna ? GO:0000028 ... P0ADZ4 25368144
    301452 4wf1:CO (3.09) BS02 rna ? GO:0000028 ... P0ADZ4 25368144
    301453 4wf1:CP (3.09) BS01 rna ? GO:0000028 ... P0A7T3 25368144
    301454 4wf1:CQ (3.09) BS01 rna ? GO:0000028 ... P0AG63 25368144
    301455 4wf1:CR (3.09) BS01 rna ? GO:0003735 ... P0A7T7 25368144
    301456 4wf1:CS (3.09) BS01 rna ? GO:0003723 ... P0A7U3 25368144
    301457 4wf1:CT (3.09) BS01 rna ? GO:0000028 ... P0A7U7 25368144
    301458 4wf1:CU (3.09) BS01 rna ? GO:0003735 ... P68679 25368144
    301459 4wf1:D0 (3.09) BS01 rna ? GO:0000027 ... P0A7N4 25368144
    301460 4wf1:D1 (3.09) BS01 rna ? GO:0000027 ... P0A7N9 25368144
    301461 4wf1:D2 (3.09) BS01 rna ? GO:0002181 ... P0A7P5 25368144
    301462 4wf1:D3 (3.09) BS01 rna ? GO:0002181 ... P0A7Q1 25368144
    301463 4wf1:D4 (3.09) BS01 rna ? GO:0002181 ... P0A7Q6 25368144
    301464 4wf1:DC (3.09) BS01 rna ? GO:0000027 ... P60422 25368144
    301465 4wf1:DD (3.09) BS01 rna ? GO:0000027 ... P60438 25368144
    301466 4wf1:DE (3.09) BS01 rna ? GO:0001070 ... P60723 25368144
    301467 4wf1:DF (3.09) BS01 rna ? GO:0000027 ... P62399 25368144
    301468 4wf1:DF (3.09) BS02 rna ? GO:0000027 ... P62399 25368144
    301469 4wf1:DG (3.09) BS01 rna ? GO:0000027 ... P0AG55 25368144
    301470 4wf1:DH (3.09) BS01 rna ? GO:0002181 ... P0A7R1 25368144
    301471 4wf1:DI (3.09) BS01 rna ? GO:0000027 ... P0A7J7 25368144
    301472 4wf1:DJ (3.09) BS01 rna ? GO:0002181 ... P0AA10 25368144
    301473 4wf1:DK (3.09) BS01 rna ? GO:0002181 ... P0ADY3 25368144
    301474 4wf1:DL (3.09) BS01 rna ? GO:0002181 ... P02413 25368144
    301475 4wf1:DM (3.09) BS01 rna ? GO:0000027 ... P0ADY7 25368144
    301476 4wf1:DM (3.09) BS02 rna ? GO:0000027 ... P0ADY7 25368144
    301477 4wf1:DN (3.09) BS01 rna ? GO:0000027 ... P0AG44 25368144
    301478 4wf1:DO (3.09) BS01 rna ? GO:0002181 ... P0C018 25368144
    301479 4wf1:DO (3.09) BS02 rna ? GO:0002181 ... P0C018 25368144
    301480 4wf1:DP (3.09) BS01 rna ? GO:0000027 ... P0A7K6 25368144
    301481 4wf1:DP (3.09) BS02 rna ? GO:0000027 ... P0A7K6 25368144
    301482 4wf1:DQ (3.09) BS01 rna ? GO:0000027 ... P0A7L3 25368144
    301483 4wf1:DR (3.09) BS01 rna ? GO:0002181 ... P0AG48 25368144
    301484 4wf1:DS (3.09) BS01 rna ? GO:0002181 ... P61175 25368144
    301485 4wf1:DT (3.09) BS01 rna ? GO:0000027 ... P0ADZ0 25368144
    301486 4wf1:DU (3.09) BS01 rna ? GO:0000027 ... P60624 25368144
    301487 4wf1:DV (3.09) BS01 rna ? GO:0000027 ... P68919 25368144
    301488 4wf1:DV (3.09) BS02 rna ? GO:0000027 ... P68919 25368144
    301489 4wf1:DW (3.09) BS01 rna ? GO:0003735 ... P0A7L8 25368144
    301490 4wf1:DW (3.09) BS02 rna ? GO:0003735 ... P0A7L8 25368144
    301491 4wf1:DX (3.09) BS01 rna ? GO:0000027 ... P0A7M2 25368144
    301492 4wf1:DY (3.09) BS01 rna ? GO:0000027 ... P0A7M6 25368144
    301493 4wf1:DZ (3.09) BS01 rna ? GO:0000027 ... P0AG51 25368144
    301494 4wf1:DZ (3.09) BS02 rna ? GO:0000027 ... P0AG51 25368144
    301495 4wf2:A (2.31) BS01 BTX 6.3.4.15 GO:0000976 ... P06709 25746672 BindingDB: Ki=87nM, Kd=1.5nM
    301496 4wf4:B (1.7) BS01 WF4 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635 MOAD: Kd=777uM
    301497 4wf5:A (1.45) BS01 WF4 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635 MOAD: Kd=777uM
    301498 4wf5:A (1.45) BS02 WF4 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635 MOAD: Kd=777uM
    301499 4wf5:B (1.45) BS01 WF4 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635
    301500 4wf5:B (1.45) BS02 CU 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635
    301501 4wf6:A (2.6521) BS01 ZN 3.4.24.83 GO:0008237 ... P15917 26492514
    301502 4wf6:A (2.6521) BS02 407 3.4.24.83 GO:0008237 ... P15917 26492514 BindingDB: IC50=1600nM
    301503 4wf7:A (2.21) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301504 4wf7:A (2.21) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301505 4wf7:B (2.21) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301506 4wf7:B (2.21) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301507 4wf7:C (2.21) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301508 4wf7:C (2.21) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301509 4wf7:D (2.21) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301510 4wf7:D (2.21) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 25478833
    301511 4wf8:A (1.7) BS01 ZN 3.6.4.13 GO:0006508 ... X2G809 25243902
    301512 4wf8:A (1.7) BS02 2R9 3.6.4.13 GO:0006508 ... X2G809 25243902
    301513 4wf9:2 (3.427) BS01 rna ? GO:0003735 ... Q2FUQ0 26464510
    301514 4wf9:3 (3.427) BS01 rna ? GO:0003735 ... Q2FXQ0 26464510
    301515 4wf9:A (3.427) BS01 rna ? GO:0002181 ... P60430 26464510
    301516 4wf9:B (3.427) BS01 rna ? GO:0003735 ... Q2FW06 26464510
    301517 4wf9:B (3.427) BS02 MG ? GO:0003735 ... Q2FW06 26464510
    301518 4wf9:C (3.427) BS01 rna ? GO:0003735 ... Q2FW07 26464510
    301519 4wf9:D (3.427) BS01 rna ? GO:0000049 ... Q2FW18 26464510
    301520 4wf9:D (3.427) BS02 rna ? GO:0000049 ... Q2FW18 26464510
    301521 4wf9:E (3.427) BS01 rna ? GO:0002181 ... Q2FW21 26464510
    301522 4wf9:G (3.427) BS01 rna ? GO:0003729 ... Q2FW38 26464510
    301523 4wf9:H (3.427) BS01 rna ? GO:0003735 ... Q2FW16 26464510
    301524 4wf9:I (3.427) BS01 rna ? GO:0003735 ... P0A0F8 26464510
    301525 4wf9:J (3.427) BS01 rna ? GO:0000049 ... Q2FW13 26464510
    301526 4wf9:J (3.427) BS02 rna ? GO:0000049 ... Q2FW13 26464510
    301527 4wf9:K (3.427) BS01 rna ? GO:0003735 ... Q2FW33 26464510
    301528 4wf9:L (3.427) BS01 rna ? GO:0003735 ... Q2FW22 26464510
    301529 4wf9:L (3.427) BS02 rna ? GO:0003735 ... Q2FW22 26464510
    301530 4wf9:M (3.427) BS01 rna ? GO:0003735 ... Q2FZ42 26464510
    301531 4wf9:N (3.427) BS01 rna ? GO:0000027 ... Q2FXQ1 26464510
    301532 4wf9:O (3.427) BS01 rna ? GO:0003723 ... Q2FXS8 26464510
    301533 4wf9:P (3.427) BS01 rna ? GO:0003735 ... Q2FW11 26464510
    301534 4wf9:Q (3.427) BS01 rna ? GO:0003735 ... Q2FW08 26464510
    301535 4wf9:R (3.427) BS01 rna ? GO:0003723 ... Q2FW17 26464510
    301536 4wf9:S (3.427) BS01 rna ? GO:0003723 ... Q2FJE0 26464510
    301537 4wf9:S (3.427) BS02 rna ? GO:0003723 ... Q2FJE0 26464510
    301538 4wf9:T (3.427) BS01 rna ? GO:0003735 ... Q2FXT0 26464510
    301539 4wf9:V (3.427) BS01 rna ? GO:0003735 ... Q2FW14 26464510
    301540 4wf9:W (3.427) BS01 rna ? GO:0003735 ... P0A0G2 26464510
    301541 4wf9:W (3.427) BS02 rna ? GO:0003735 ... P0A0G2 26464510
    301542 4wf9:Z (3.427) BS01 rna ? GO:0003735 ... Q2FZF1 26464510
    301543 4wfa:2 (3.392) BS01 rna ? GO:0003735 ... Q2FUQ0 26464510
    301544 4wfa:3 (3.392) BS01 rna ? GO:0003735 ... Q2FXQ0 26464510
    301545 4wfa:4 (3.392) BS01 rna ? GO:0003735 ... Q2FW29 26464510
    301546 4wfa:A (3.392) BS01 rna ? GO:0002181 ... P60430 26464510
    301547 4wfa:A (3.392) BS02 MG ? GO:0002181 ... P60430 26464510
    301548 4wfa:B (3.392) BS01 rna ? GO:0003735 ... Q2FW06 26464510
    301549 4wfa:C (3.392) BS01 rna ? GO:0003735 ... Q2FW07 26464510
    301550 4wfa:D (3.392) BS01 rna ? GO:0000049 ... Q2FW18 26464510
    301551 4wfa:D (3.392) BS02 rna ? GO:0000049 ... Q2FW18 26464510
    301552 4wfa:E (3.392) BS01 rna ? GO:0002181 ... Q2FW21 26464510
    301553 4wfa:G (3.392) BS01 rna ? GO:0003729 ... Q2FW38 26464510
    301554 4wfa:H (3.392) BS01 rna ? GO:0003735 ... Q2FW16 26464510
    301555 4wfa:I (3.392) BS01 rna ? GO:0003735 ... P0A0F8 26464510
    301556 4wfa:J (3.392) BS01 rna ? GO:0000049 ... Q2FW13 26464510
    301557 4wfa:J (3.392) BS02 rna ? GO:0000049 ... Q2FW13 26464510
    301558 4wfa:K (3.392) BS01 rna ? GO:0003735 ... Q2FW33 26464510
    301559 4wfa:L (3.392) BS01 rna ? GO:0003735 ... Q2FW22 26464510
    301560 4wfa:L (3.392) BS02 rna ? GO:0003735 ... Q2FW22 26464510
    301561 4wfa:M (3.392) BS01 rna ? GO:0003735 ... Q2FZ42 26464510
    301562 4wfa:N (3.392) BS01 rna ? GO:0000027 ... Q2FXQ1 26464510
    301563 4wfa:O (3.392) BS01 rna ? GO:0003723 ... Q2FXS8 26464510
    301564 4wfa:P (3.392) BS01 rna ? GO:0003735 ... Q2FW11 26464510
    301565 4wfa:Q (3.392) BS01 rna ? GO:0003735 ... Q2FW08 26464510
    301566 4wfa:R (3.392) BS01 rna ? GO:0003723 ... Q2FW17 26464510
    301567 4wfa:S (3.392) BS01 rna ? GO:0003723 ... Q2FJE0 26464510
    301568 4wfa:S (3.392) BS02 rna ? GO:0003723 ... Q2FJE0 26464510
    301569 4wfa:T (3.392) BS01 rna ? GO:0003735 ... Q2FXT0 26464510
    301570 4wfa:U (3.392) BS01 rna ? GO:0003735 ... Q2FZ60 26464510
    301571 4wfa:V (3.392) BS01 rna ? GO:0003735 ... Q2FW14 26464510
    301572 4wfa:W (3.392) BS01 rna ? GO:0003735 ... P0A0G2 26464510
    301573 4wfa:W (3.392) BS02 rna ? GO:0003735 ... P0A0G2 26464510
    301574 4wfa:Z (3.392) BS01 rna ? GO:0003735 ... Q2FZF1 26464510
    301575 4wfb:2 (3.43) BS01 rna ? GO:0003735 ... Q2FUQ0 26464510
    301576 4wfb:3 (3.43) BS01 rna ? GO:0003735 ... Q2FXQ0 26464510
    301577 4wfb:4 (3.43) BS01 rna ? GO:0003735 ... Q2FW29 26464510
    301578 4wfb:A (3.43) BS01 rna ? GO:0002181 ... P60430 26464510
    301579 4wfb:B (3.43) BS01 rna ? GO:0003735 ... Q2FW06 26464510
    301580 4wfb:B (3.43) BS02 MN ? GO:0003735 ... Q2FW06 26464510
    301581 4wfb:C (3.43) BS01 rna ? GO:0003735 ... Q2FW07 26464510
    301582 4wfb:D (3.43) BS01 rna ? GO:0000049 ... Q2FW18 26464510
    301583 4wfb:D (3.43) BS02 rna ? GO:0000049 ... Q2FW18 26464510
    301584 4wfb:E (3.43) BS01 rna ? GO:0002181 ... Q2FW21 26464510
    301585 4wfb:G (3.43) BS01 rna ? GO:0003729 ... Q2FW38 26464510
    301586 4wfb:H (3.43) BS01 rna ? GO:0003735 ... Q2FW16 26464510
    301587 4wfb:I (3.43) BS01 rna ? GO:0003735 ... P0A0F8 26464510
    301588 4wfb:J (3.43) BS01 rna ? GO:0000049 ... Q2FW13 26464510
    301589 4wfb:J (3.43) BS02 rna ? GO:0000049 ... Q2FW13 26464510
    301590 4wfb:K (3.43) BS01 rna ? GO:0003735 ... Q2FW33 26464510
    301591 4wfb:L (3.43) BS01 rna ? GO:0003735 ... Q2FW22 26464510
    301592 4wfb:L (3.43) BS02 rna ? GO:0003735 ... Q2FW22 26464510
    301593 4wfb:M (3.43) BS01 rna ? GO:0003735 ... Q2FZ42 26464510
    301594 4wfb:N (3.43) BS01 rna ? GO:0000027 ... Q2FXQ1 26464510
    301595 4wfb:O (3.43) BS01 rna ? GO:0003723 ... Q2FXS8 26464510
    301596 4wfb:P (3.43) BS01 rna ? GO:0003735 ... Q2FW11 26464510
    301597 4wfb:Q (3.43) BS01 rna ? GO:0003735 ... Q2FW08 26464510
    301598 4wfb:R (3.43) BS01 rna ? GO:0003723 ... Q2FW17 26464510
    301599 4wfb:S (3.43) BS01 rna ? GO:0003723 ... Q2G0S0 26464510
    301600 4wfb:T (3.43) BS01 rna ? GO:0003735 ... Q2FXT0 26464510

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).