SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    301601 4wfb:U (3.43) BS01 rna ? GO:0003735 ... Q2FZ60 26464510
    301602 4wfb:V (3.43) BS01 rna ? GO:0003735 ... Q2FW14 26464510
    301603 4wfb:W (3.43) BS01 rna ? GO:0003735 ... P0A0G2 26464510
    301604 4wfb:W (3.43) BS02 rna ? GO:0003735 ... P0A0G2 26464510
    301605 4wfb:Z (3.43) BS01 rna ? GO:0003735 ... Q2FZF1 26464510
    301606 4wfd:A (2.4) BS01 peptide 3.1.13.- GO:0000176 ... Q12149 25319414
    301607 4wfd:B (2.4) BS01 peptide ? N/A P38801 25319414
    301608 4wfd:E (2.4) BS01 peptide ? N/A P38801 25319414
    301609 4wfd:H (2.4) BS01 peptide ? N/A P38801 25319414
    301610 4wfe:A (2.5) BS01 CA ? N/A Q9NYG8 25471887
    301611 4wfe:A (2.5) BS02 CA ? N/A Q9NYG8 25471887
    301612 4wfe:G (2.5) BS01 CA N/A N/A N/A 25471887
    301613 4wff:A (2.5) BS01 CA ? GO:0005267 ... Q9NYG8 25471887
    301614 4wff:A (2.5) BS02 CA ? GO:0005267 ... Q9NYG8 25471887
    301615 4wff:G (2.5) BS01 CA N/A N/A N/A 25471887
    301616 4wfg:A (3.0) BS01 CA ? GO:0005267 ... Q9NYG8 25471887
    301617 4wfg:A (3.0) BS02 CA ? GO:0005267 ... Q9NYG8 25471887
    301618 4wfg:G (3.0) BS01 CA N/A N/A N/A 25471887
    301619 4wfh:A (3.01) BS01 CA ? GO:0005267 ... Q9NYG8 25471887
    301620 4wfh:A (3.01) BS02 CA ? GO:0005267 ... Q9NYG8 25471887
    301621 4wfh:G (3.01) BS01 CA N/A N/A N/A 25471887
    301622 4wfj:A (1.75) BS01 CA 3.1.1.74 N/A W0TJ64 25492421
    301623 4wfk:A (2.35) BS01 CA 3.1.1.74 N/A W0TJ64 25492421
    301624 4wfn:1 (3.54) BS01 rna ? GO:0000049 ... Q9RSS4 28689968
    301625 4wfn:2 (3.54) BS01 rna ? GO:0003735 ... Q9RSH2 28689968
    301626 4wfn:3 (3.54) BS01 rna ? GO:0003735 ... Q9RSW6 28689968
    301627 4wfn:A (3.54) BS01 rna ? GO:0002181 ... Q9RXJ9 28689968
    301628 4wfn:B (3.54) BS01 rna ? GO:0003735 ... Q9RXK2 28689968
    301629 4wfn:C (3.54) BS01 rna ? GO:0003735 ... Q9RXK1 28689968
    301630 4wfn:D (3.54) BS01 rna ? GO:0000049 ... Q9RXJ0 28689968
    301631 4wfn:D (3.54) BS02 rna ? GO:0000049 ... Q9RXJ0 28689968
    301632 4wfn:E (3.54) BS01 rna ? GO:0002181 ... Q9RSL3 28689968
    301633 4wfn:G (3.54) BS01 rna ? GO:0003729 ... Q9RXY1 28689968
    301634 4wfn:H (3.54) BS01 rna ? GO:0003735 ... Q9RXJ2 28689968
    301635 4wfn:I (3.54) BS01 rna ? GO:0003735 ... Q9RSK9 28689968
    301636 4wfn:J (3.54) BS01 rna ? GO:0000049 ... Q9RXJ5 28689968
    301637 4wfn:J (3.54) BS02 rna ? GO:0000049 ... Q9RXJ5 28689968
    301638 4wfn:K (3.54) BS01 rna ? GO:0003735 ... Q9RSJ5 28689968
    301639 4wfn:K (3.54) BS02 MG ? GO:0003735 ... Q9RSJ5 28689968
    301640 4wfn:L (3.54) BS01 rna ? GO:0003735 ... Q9RSL2 28689968
    301641 4wfn:L (3.54) BS02 rna ? GO:0003735 ... Q9RSL2 28689968
    301642 4wfn:M (3.54) BS01 rna ? GO:0003735 ... Q9RWB4 28689968
    301643 4wfn:N (3.54) BS01 rna ? GO:0000027 ... Q9RSW7 28689968
    301644 4wfn:O (3.54) BS01 rna ? GO:0003723 ... Q9RY64 28689968
    301645 4wfn:P (3.54) BS01 rna ? GO:0003735 ... Q9RXJ7 28689968
    301646 4wfn:Q (3.54) BS01 rna ? GO:0003735 ... Q9RXK0 28689968
    301647 4wfn:R (3.54) BS01 rna ? GO:0003723 ... Q9RXJ1 28689968
    301648 4wfn:S (3.54) BS01 rna ? GO:0000049 ... Q9RX88 28689968
    301649 4wfn:S (3.54) BS02 rna ? GO:0000049 ... Q9RX88 28689968
    301650 4wfn:T (3.54) BS01 rna ? GO:0000049 ... Q9RY65 28689968
    301651 4wfn:U (3.54) BS01 rna ? GO:0003735 ... Q9RRG8 28689968
    301652 4wfn:V (3.54) BS01 rna ? GO:0003735 ... Q9RXJ4 28689968
    301653 4wfn:W (3.54) BS01 rna ? GO:0003735 ... Q9RSL0 28689968
    301654 4wfn:Z (3.54) BS01 rna ? GO:0003735 ... P49228 28689968
    301655 4wfo:A (1.14) BS01 MN 1.13.11.12 GO:0005506 ... P08170 N/A
    301656 4wfr:A (2.0) BS01 2AM 3.1.4.37 GO:0004113 ... P16330 26563764
    301657 4wfs:A (2.68) BS01 FMN 1.3.1.91 GO:0008033 ... Q9NX74 26429968
    301658 4wg2:A (2.66) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 25325618
    301659 4wg2:B (2.66) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 25325618
    301660 4wg2:C (2.66) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 25325618
    301661 4wg3:A (2.2) BS01 UWA 2.7.11.17 GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=10.8nM
    301662 4wg4:A (2.3) BS01 UWB 2.7.11.17 GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=19.1nM
    301663 4wg5:A (2.3) BS01 UW3 2.7.11.17 GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=19.0nM
    301664 4wgf:A (2.34021) BS01 ROP ? GO:0016787 ... Q9I4D6 26184183
    301665 4wgf:A (2.34021) BS02 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301666 4wgf:A (2.34021) BS03 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301667 4wgf:B (2.34021) BS01 ROP ? GO:0016787 ... Q9I4D6 26184183
    301668 4wgf:B (2.34021) BS02 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301669 4wgf:B (2.34021) BS03 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301670 4wgf:C (2.34021) BS01 ROP ? GO:0016787 ... Q9I4D6 26184183
    301671 4wgf:C (2.34021) BS02 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301672 4wgf:C (2.34021) BS03 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301673 4wgf:D (2.34021) BS01 ROP ? GO:0016787 ... Q9I4D6 26184183
    301674 4wgf:D (2.34021) BS02 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301675 4wgf:D (2.34021) BS03 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301676 4wgf:E (2.34021) BS01 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301677 4wgf:E (2.34021) BS02 ROP ? GO:0016787 ... Q9I4D6 26184183
    301678 4wgf:F (2.34021) BS01 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301679 4wgf:F (2.34021) BS02 ROP ? GO:0016787 ... Q9I4D6 26184183
    301680 4wgf:F (2.34021) BS03 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301681 4wgf:G (2.34021) BS01 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301682 4wgf:G (2.34021) BS02 ROP ? GO:0016787 ... Q9I4D6 26184183
    301683 4wgf:G (2.34021) BS03 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301684 4wgf:H (2.34021) BS01 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301685 4wgf:H (2.34021) BS02 ROP ? GO:0016787 ... Q9I4D6 26184183
    301686 4wgf:H (2.34021) BS03 HX2 ? GO:0016787 ... Q9I4D6 26184183
    301687 4wgg:A (2.4) BS01 NAP ? GO:0000166 ... A0A096LNF0 N/A
    301688 4wgg:A (2.4) BS02 CIY ? GO:0000166 ... A0A096LNF0 N/A
    301689 4wgg:B (2.4) BS01 NAP ? GO:0000166 ... A0A096LNF0 N/A
    301690 4wgh:A (1.8) BS01 NAP N/A GO:0016491 ... N/A N/A
    301691 4wgi:A (1.85) BS01 GLC ? GO:0008643 ... P0AEY0
    Q07820
    25516789
    301692 4wgi:A (1.85) BS02 GLC ? GO:0008643 ... P0AEY0
    Q07820
    25516789
    301693 4wgi:A (1.85) BS03 3M6 ? GO:0008643 ... P0AEY0
    Q07820
    25516789
    301694 4wgj:A (1.7) BS01 ANP 2.7.7.108 N/A A9IWP7 34442725
    301695 4wgj:A (1.7) BS02 GLY 2.7.7.108 N/A A9IWP7 34442725
    301696 4wgj:A (1.7) BS03 GLY 2.7.7.108 N/A A9IWP7 34442725
    301697 4wgk:A (2.582) BS01 ZN 3.5.1.-
    3.5.1.23
    GO:0017040 ... Q9NR71 26190575
    301698 4wgk:A (2.582) BS02 CA 3.5.1.-
    3.5.1.23
    GO:0017040 ... Q9NR71 26190575
    301699 4wgk:A (2.582) BS03 PO4 3.5.1.-
    3.5.1.23
    GO:0017040 ... Q9NR71 26190575
    301700 4wgk:B (2.582) BS01 ZN 3.5.1.-
    3.5.1.23
    GO:0017040 ... Q9NR71 26190575
    301701 4wgk:B (2.582) BS02 CA 3.5.1.-
    3.5.1.23
    GO:0017040 ... Q9NR71 26190575
    301702 4wgk:B (2.582) BS03 PO4 3.5.1.-
    3.5.1.23
    GO:0017040 ... Q9NR71 26190575
    301703 4wgx:A (2.29) BS01 CO ? GO:0016787 ... G2XLB0 25636851
    301704 4wgy:A (1.48) BS01 HEC ? GO:0005506 ... P00138 N/A
    301705 4wgz:A (1.11) BS01 HEC ? GO:0005506 ... P00138 N/A
    301706 4wh2:A (1.847) BS01 ADP 2.7.1.162 GO:0005524 ... E8MF12 25644306
    301707 4wh2:A (1.847) BS02 MG 2.7.1.162 GO:0005524 ... E8MF12 25644306
    301708 4wh3:A (1.8) BS01 ATP 2.7.1.162 GO:0005524 ... E8MF12 25644306
    301709 4wh3:A (1.8) BS02 MG 2.7.1.162 GO:0005524 ... E8MF12 25644306
    301710 4wh5:A (1.82) BS01 MG ? GO:0046677 ... P06107 N/A
    301711 4wh5:A (1.82) BS02 MG ? GO:0046677 ... P06107 N/A
    301712 4wh5:A (1.82) BS03 3QB ? GO:0046677 ... P06107 N/A
    301713 4wh5:B (1.82) BS01 MG ? GO:0046677 ... P06107 N/A
    301714 4wh5:B (1.82) BS02 MG ? GO:0046677 ... P06107 N/A
    301715 4wh5:B (1.82) BS03 3QB ? GO:0046677 ... P06107 N/A
    301716 4wh6:A (1.99) BS01 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... A8DG50 25243902
    301717 4wh6:A (1.99) BS02 2R9 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... A8DG50 25243902
    301718 4wh7:A (1.62) BS01 8H8 3.1.3.48 GO:0004725 ... P30305 25423142 MOAD: ic50>5mM
    301719 4wh8:A (2.703) BS01 3M7 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... A8DG50 25243902
    301720 4wh8:B (2.703) BS01 3M7 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... A8DG50 25243902
    301721 4wh8:B (2.703) BS02 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... A8DG50 25243902
    301722 4wh9:A (1.5) BS01 3M8 3.1.3.48 GO:0004725 ... P30305 25423142 MOAD: ic50=2.2mM
    301723 4wha:A (1.7) BS01 FE 1.13.11.12 GO:0005506 ... P08170 24884374
    301724 4whb:A (2.958) BS01 ZN ? GO:0016787 ... B8R4K0 25636851
    301725 4whf:A (2.27) BS01 3MX ? GO:0003677 ... P22736 26235054
    301726 4whg:A (2.18) BS01 3NB ? GO:0003677 ... P22736 26235054
    301727 4whh:A (1.9) BS01 peptide 2.7.11.21 N/A P53350 25347203
    301728 4whk:A (1.8) BS01 peptide 2.7.11.21 N/A P53350 25347203
    301729 4whl:A (2.71) BS01 peptide 2.7.11.21 N/A P53350 25347203
    301730 4whm:A (1.851) BS01 UDP 2.4.1.- GO:0000166 ... A4F1R4 25556637
    301731 4who:A (1.83) BS01 BCT 1.13.11.3 GO:0003824 ... P00436 25548185
    301732 4who:B (1.83) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301733 4who:D (1.83) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301734 4who:F (1.83) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301735 4whp:B (1.541) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301736 4whp:C (1.541) BS01 BCT 1.13.11.3 GO:0003824 ... P00436 25548185
    301737 4whp:D (1.541) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301738 4whp:F (1.541) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301739 4whq:A (1.78) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301740 4whq:B (1.78) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301741 4whq:B (1.78) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301742 4whq:B (1.78) BS03 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301743 4whq:B (1.78) BS04 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301744 4whq:B (1.78) BS05 3N9 1.13.11.3 GO:0003824 ... P00437 25548185
    301745 4whq:C (1.78) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301746 4whq:C (1.78) BS02 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301747 4whq:D (1.78) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301748 4whq:D (1.78) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301749 4whq:D (1.78) BS03 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301750 4whq:D (1.78) BS04 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301751 4whq:E (1.78) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301752 4whq:F (1.78) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301753 4whq:F (1.78) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301754 4whq:F (1.78) BS03 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301755 4whq:F (1.78) BS04 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301756 4whq:F (1.78) BS05 BCT 1.13.11.3 GO:0003824 ... P00437 25548185
    301757 4whr:A (1.58) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301758 4whr:A (1.58) BS02 3NJ 1.13.11.3 GO:0003824 ... P00436 25548185
    301759 4whr:B (1.58) BS01 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301760 4whr:B (1.58) BS02 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301761 4whr:B (1.58) BS03 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301762 4whr:B (1.58) BS04 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301763 4whr:B (1.58) BS05 3NJ 1.13.11.3 GO:0003824 ... P00437 25548185
    301764 4whr:C (1.58) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301765 4whr:D (1.58) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301766 4whr:D (1.58) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301767 4whr:D (1.58) BS03 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301768 4whr:D (1.58) BS04 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301769 4whr:D (1.58) BS05 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301770 4whr:E (1.58) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301771 4whr:F (1.58) BS01 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301772 4whr:F (1.58) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301773 4whr:F (1.58) BS03 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301774 4whs:A (1.35) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301775 4whs:A (1.35) BS02 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301776 4whs:B (1.35) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301777 4whs:B (1.35) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301778 4whs:C (1.35) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301779 4whs:C (1.35) BS02 MUC 1.13.11.3 GO:0003824 ... P00436 25548185
    301780 4whs:C (1.35) BS03 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301781 4whs:D (1.35) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301782 4whs:D (1.35) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301783 4whs:E (1.35) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301784 4whs:E (1.35) BS02 3N8 1.13.11.3 GO:0003824 ... P00436 25548185
    301785 4whs:E (1.35) BS03 MUC 1.13.11.3 GO:0003824 ... P00436 25548185
    301786 4whs:F (1.35) BS01 FE 1.13.11.3 GO:0003824 ... P00437 25548185
    301787 4whs:F (1.35) BS02 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301788 4whs:F (1.35) BS03 3N8 1.13.11.3 GO:0003824 ... P00437 25548185
    301789 4wht:A (2.22) BS01 peptide N/A N/A N/A 25473061
    301790 4wht:B (2.22) BS01 peptide N/A N/A N/A 25473061
    301791 4wht:B (2.22) BS02 peptide N/A N/A N/A 25473061
    301792 4wht:C (2.22) BS01 peptide N/A N/A N/A 25473061
    301793 4wht:D (2.22) BS01 peptide N/A N/A N/A 25473061
    301794 4wht:D (2.22) BS02 peptide N/A N/A N/A 25473061
    301795 4wht:E (2.22) BS01 peptide N/A N/A N/A 25473061
    301796 4wht:F (2.22) BS01 peptide N/A N/A N/A 25473061
    301797 4wht:G (2.22) BS01 peptide N/A N/A N/A 25473061
    301798 4wht:H (2.22) BS01 peptide N/A N/A N/A 25473061
    301799 4wht:I (2.22) BS01 peptide N/A N/A N/A 25473061
    301800 4wht:J (2.22) BS01 peptide N/A N/A N/A 25473061

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).