SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1506 1507 1508 1509 1510 1511 1512 1513 1514 1515 1516 1517 1518 1519 1520 1521 1522 1523 1524 1525 1526 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    303001 4wq1:6E (3.1) BS02 rna ? GO:0000049 ... P17291 26037619
    303002 4wq1:6I (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 26037619
    303003 4wq1:6I (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 26037619
    303004 4wq1:72 (3.1) BS01 rna ? GO:0003735 ... P0DOY9 26037619
    303005 4wq1:75 (3.1) BS01 rna ? GO:0003735 ... P60490 26037619
    303006 4wq1:75 (3.1) BS02 rna ? GO:0003735 ... P60490 26037619
    303007 4wq1:78 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 26037619
    303008 4wq1:78 (3.1) BS02 MG ? GO:0003735 ... Q5SHQ7 26037619
    303009 4wq1:7A (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 26037619
    303010 4wq1:7E (3.1) BS01 rna ? GO:0003735 ... P0DOY9 26037619
    303011 4wq1:7I (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 26037619
    303012 4wq1:82 (3.1) BS01 rna ? GO:0000049 ... P80374 26037619
    303013 4wq1:82 (3.1) BS02 rna ? GO:0000049 ... P80374 26037619
    303014 4wq1:85 (3.1) BS01 rna ? GO:0000027 ... P60491 26037619
    303015 4wq1:88 (3.1) BS01 rna ? GO:0000049 ... P60489 26037619
    303016 4wq1:88 (3.1) BS02 rna ? GO:0000049 ... P60489 26037619
    303017 4wq1:88 (3.1) BS03 rna ? GO:0000049 ... P60489 26037619
    303018 4wq1:88 (3.1) BS04 MG ? GO:0000049 ... P60489 26037619
    303019 4wq1:8A (3.1) BS01 rna ? GO:0003735 ... A0A0N0BLS5 26037619
    303020 4wq1:8E (3.1) BS01 rna ? GO:0000049 ... P80374 26037619
    303021 4wq1:8E (3.1) BS02 rna ? GO:0000049 ... P80374 26037619
    303022 4wq1:8I (3.1) BS01 rna ? GO:0003735 ... A0A0N0BLS5 26037619
    303023 4wq1:95 (3.1) BS01 rna ? GO:0003723 ... P60492 26037619
    303024 4wq1:98 (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 26037619
    303025 4wq1:9A (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 26037619
    303026 4wq1:9I (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 26037619
    303027 4wq1:A5 (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 26037619
    303028 4wq1:A8 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 26037619
    303029 4wq1:A8 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 26037619
    303030 4wq1:AA (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 26037619
    303031 4wq1:AI (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 26037619
    303032 4wq1:B5 (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 26037619
    303033 4wq1:B8 (3.1) BS01 rna ? GO:0003735 ... P60490 26037619
    303034 4wq1:B8 (3.1) BS02 rna ? GO:0003735 ... P60490 26037619
    303035 4wq1:B8 (3.1) BS03 MG ? GO:0003735 ... P60490 26037619
    303036 4wq1:BA (3.1) BS01 rna ? GO:0003723 ... P80380 26037619
    303037 4wq1:BI (3.1) BS01 rna ? GO:0003723 ... P80380 26037619
    303038 4wq1:C5 (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 26037619
    303039 4wq1:C5 (3.1) BS02 ZN ? GO:0003723 ... Q5SHP9 26037619
    303040 4wq1:C8 (3.1) BS01 rna ? GO:0000027 ... P60491 26037619
    303041 4wq1:D5 (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 26037619
    303042 4wq1:D5 (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 26037619
    303043 4wq1:D8 (3.1) BS01 rna ? GO:0003723 ... P60492 26037619
    303044 4wq1:E5 (3.1) BS01 rna ? GO:0003735 ... P60493 26037619
    303045 4wq1:E5 (3.1) BS02 rna ? GO:0003735 ... P60493 26037619
    303046 4wq1:E5 (3.1) BS03 MG ? GO:0003735 ... P60493 26037619
    303047 4wq1:E8 (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 26037619
    303048 4wq1:F5 (3.1) BS01 rna ? GO:0003735 ... P60494 26037619
    303049 4wq1:F8 (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 26037619
    303050 4wq1:G5 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 26037619
    303051 4wq1:G8 (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 26037619
    303052 4wq1:G8 (3.1) BS02 ZN ? GO:0003723 ... Q5SHP9 26037619
    303053 4wq1:H5 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 26037619
    303054 4wq1:H5 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 26037619
    303055 4wq1:H8 (3.1) BS01 rna ? GO:0003735 ... Q5SHZ1 26037619
    303056 4wq1:I5 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 26037619
    303057 4wq1:I8 (3.1) BS01 rna ? GO:0003735 ... P60493 26037619
    303058 4wq1:I8 (3.1) BS02 rna ? GO:0003735 ... P60493 26037619
    303059 4wq1:J5 (3.1) BS01 rna ? GO:0003735 ... P80339 26037619
    303060 4wq1:J8 (3.1) BS01 rna ? GO:0003735 ... P60494 26037619
    303061 4wq1:K5 (3.1) BS01 rna ? GO:0003735 ... P35871 26037619
    303062 4wq1:K8 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 26037619
    303063 4wq1:K8 (3.1) BS02 MG ? GO:0003735 ... Q5SHP6 26037619
    303064 4wq1:L5 (3.1) BS01 rna ? GO:0003735 ... P80340 26037619
    303065 4wq1:L8 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 26037619
    303066 4wq1:L8 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 26037619
    303067 4wq1:M5 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 26037619
    303068 4wq1:M8 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 26037619
    303069 4wq1:M8 (3.1) BS02 rna ? GO:0003735 ... Q5SJE1 26037619
    303070 4wq1:N8 (3.1) BS01 rna ? GO:0003735 ... P80339 26037619
    303071 4wq1:O8 (3.1) BS01 rna ? GO:0003735 ... P35871 26037619
    303072 4wq1:P8 (3.1) BS01 rna ? GO:0003735 ... P80340 26037619
    303073 4wq1:Q8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 26037619
    303074 4wq2:A (1.64) BS01 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.5uM
    303075 4wq2:A (1.64) BS02 CA ? GO:0005509 ... P04632 28757975
    303076 4wq2:A (1.64) BS03 CA ? GO:0005509 ... P04632 28757975
    303077 4wq2:A (1.64) BS04 CA ? GO:0005509 ... P04632 28757975
    303078 4wq2:A (1.64) BS05 CA ? GO:0005509 ... P04632 28757975
    303079 4wq2:B (1.64) BS01 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.5uM
    303080 4wq2:B (1.64) BS02 CA ? GO:0005509 ... P04632 28757975
    303081 4wq2:B (1.64) BS03 CA ? GO:0005509 ... P04632 28757975
    303082 4wq2:B (1.64) BS04 CA ? GO:0005509 ... P04632 28757975
    303083 4wq2:B (1.64) BS05 CA ? GO:0005509 ... P04632 28757975
    303084 4wq3:A (1.79) BS01 CA ? GO:0005509 ... P04632 28757975
    303085 4wq3:A (1.79) BS02 CA ? GO:0005509 ... P04632 28757975
    303086 4wq3:A (1.79) BS03 CA ? GO:0005509 ... P04632 28757975
    303087 4wq3:A (1.79) BS04 CA ? GO:0005509 ... P04632 28757975
    303088 4wq3:A (1.79) BS05 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    303089 4wq3:A (1.79) BS06 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    303090 4wq3:B (1.79) BS01 CA ? GO:0005509 ... P04632 28757975
    303091 4wq3:B (1.79) BS02 CA ? GO:0005509 ... P04632 28757975
    303092 4wq3:B (1.79) BS03 CA ? GO:0005509 ... P04632 28757975
    303093 4wq3:B (1.79) BS04 CA ? GO:0005509 ... P04632 28757975
    303094 4wq3:B (1.79) BS05 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    303095 4wq3:B (1.79) BS06 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    303096 4wq4:A (2.33) BS01 FE 2.3.1.234 GO:0000287 ... P05852 25578970
    303097 4wq4:A (2.33) BS02 ATP 2.3.1.234 GO:0000287 ... P05852 25578970
    303098 4wq4:B (2.33) BS01 FE 2.3.1.234 GO:0000287 ... P05852 25578970
    303099 4wq4:B (2.33) BS02 ATP 2.3.1.234 GO:0000287 ... P05852 25578970
    303100 4wq5:A (2.33) BS01 MG 2.3.1.234 GO:0000287 ... P05852 25578970
    303101 4wq5:A (2.33) BS02 FE 2.3.1.234 GO:0000287 ... P05852 25578970
    303102 4wq5:A (2.33) BS03 ATP 2.3.1.234 GO:0000287 ... P05852 25578970
    303103 4wq5:B (2.33) BS01 MG 2.3.1.234 GO:0000287 ... P05852 25578970
    303104 4wq5:B (2.33) BS02 FE 2.3.1.234 GO:0000287 ... P05852 25578970
    303105 4wq5:B (2.33) BS03 ATP 2.3.1.234 GO:0000287 ... P05852 25578970
    303106 4wq6:A (1.72) BS01 3TQ 2.4.2.12 GO:0005125 ... P43490 25556090 MOAD: ic50=0.026uM
    BindingDB: IC50=9.30nM
    303107 4wq6:B (1.72) BS01 3TQ 2.4.2.12 GO:0005125 ... P43490 25556090 MOAD: ic50=0.026uM
    BindingDB: IC50=9.30nM
    303108 4wq7:A (1.98) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303109 4wq7:A (1.98) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303110 4wq8:A (1.3989) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303111 4wq8:A (1.3989) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303112 4wq9:A (1.47) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303113 4wq9:A (1.47) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303114 4wq9:A (1.47) BS03 THJ 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303115 4wqa:A (1.64) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303116 4wqa:A (1.64) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303117 4wqa:A (1.64) BS03 SO3 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303118 4wqb:A (1.5013) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303119 4wqb:A (1.5013) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303120 4wqb:A (1.5013) BS03 SO3 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303121 4wqc:A (1.56) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303122 4wqc:A (1.56) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303123 4wqc:A (1.56) BS03 THJ 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303124 4wqd:A (1.22) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303125 4wqd:A (1.22) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303126 4wqe:A (1.4) BS01 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303127 4wqe:A (1.4) BS02 HEC 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303128 4wqe:A (1.4) BS03 THJ 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303129 4wqe:A (1.4) BS04 SO3 1.8.2.2 GO:0009055 ... D3RVD4 25673691
    303130 4wqf:A0 (2.8) BS01 rna ? GO:0003735 ... P60493 25594181
    303131 4wqf:A0 (2.8) BS02 rna ? GO:0003735 ... P60493 25594181
    303132 4wqf:A0 (2.8) BS03 rna ? GO:0003735 ... P60493 25594181
    303133 4wqf:A1 (2.8) BS01 rna ? GO:0003735 ... P60494 25594181
    303134 4wqf:A2 (2.8) BS01 rna ? GO:0003735 ... Q5SHP6 25594181
    303135 4wqf:A3 (2.8) BS01 rna ? GO:0003735 ... Q5SHQ6 25594181
    303136 4wqf:A3 (2.8) BS02 rna ? GO:0003735 ... Q5SHQ6 25594181
    303137 4wqf:A4 (2.8) BS01 rna ? GO:0003735 ... Q5SJE1 25594181
    303138 4wqf:A4 (2.8) BS02 ZN ? GO:0003735 ... Q5SJE1 25594181
    303139 4wqf:A5 (2.8) BS01 rna ? GO:0003735 ... P80339 25594181
    303140 4wqf:A5 (2.8) BS02 ZN ? GO:0003735 ... P80339 25594181
    303141 4wqf:A6 (2.8) BS01 rna ? GO:0000049 ... P35871 25594181
    303142 4wqf:A6 (2.8) BS02 MG ? GO:0000049 ... P35871 25594181
    303143 4wqf:A6 (2.8) BS03 ZN ? GO:0000049 ... P35871 25594181
    303144 4wqf:A7 (2.8) BS01 rna ? GO:0003735 ... P80340 25594181
    303145 4wqf:A7 (2.8) BS02 MG ? GO:0003735 ... P80340 25594181
    303146 4wqf:A7 (2.8) BS03 MG ? GO:0003735 ... P80340 25594181
    303147 4wqf:A7 (2.8) BS04 MG ? GO:0003735 ... P80340 25594181
    303148 4wqf:A7 (2.8) BS05 MG ? GO:0003735 ... P80340 25594181
    303149 4wqf:A7 (2.8) BS06 MG ? GO:0003735 ... P80340 25594181
    303150 4wqf:A8 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 25594181
    303151 4wqf:A8 (2.8) BS02 MG ? GO:0003735 ... Q5SKU1 25594181
    303152 4wqf:A9 (2.8) BS01 rna ? GO:0003735 ... Q5SHR2 25594181
    303153 4wqf:A9 (2.8) BS02 ZN ? GO:0003735 ... Q5SHR2 25594181
    303154 4wqf:AC (2.8) BS01 rna ? GO:0000049 ... Q5SLP7 25594181
    303155 4wqf:AD (2.8) BS01 rna ? GO:0002181 ... P60405 25594181
    303156 4wqf:AD (2.8) BS02 MG ? GO:0002181 ... P60405 25594181
    303157 4wqf:AD (2.8) BS03 MG ? GO:0002181 ... P60405 25594181
    303158 4wqf:AD (2.8) BS04 MG ? GO:0002181 ... P60405 25594181
    303159 4wqf:AD (2.8) BS05 MG ? GO:0002181 ... P60405 25594181
    303160 4wqf:AD (2.8) BS06 MG ? GO:0002181 ... P60405 25594181
    303161 4wqf:AD (2.8) BS07 MG ? GO:0002181 ... P60405 25594181
    303162 4wqf:AD (2.8) BS08 MG ? GO:0002181 ... P60405 25594181
    303163 4wqf:AE (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 25594181
    303164 4wqf:AE (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 25594181
    303165 4wqf:AF (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 25594181
    303166 4wqf:AF (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 25594181
    303167 4wqf:AF (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 25594181
    303168 4wqf:AF (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 25594181
    303169 4wqf:AF (2.8) BS05 MG ? GO:0003735 ... Q5SHN9 25594181
    303170 4wqf:AF (2.8) BS06 MG ? GO:0003735 ... Q5SHN9 25594181
    303171 4wqf:AG (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 25594181
    303172 4wqf:AG (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 25594181
    303173 4wqf:AG (2.8) BS03 rna ? GO:0000049 ... Q5SHQ0 25594181
    303174 4wqf:AG (2.8) BS04 MG ? GO:0000049 ... Q5SHQ0 25594181
    303175 4wqf:AH (2.8) BS01 rna N/A GO:0003735 ... N/A 25594181
    303176 4wqf:AH (2.8) BS02 MG N/A GO:0003735 ... N/A 25594181
    303177 4wqf:AK (2.8) BS01 rna ? GO:0005840 ... Q8VVE3 25594181
    303178 4wqf:AL (2.8) BS01 rna ? GO:0003735 ... Q5SLP6 25594181
    303179 4wqf:AN (2.8) BS01 rna ? GO:0003729 ... P60488 25594181
    303180 4wqf:AN (2.8) BS02 MG ? GO:0003729 ... P60488 25594181
    303181 4wqf:AN (2.8) BS03 MG ? GO:0003729 ... P60488 25594181
    303182 4wqf:AO (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 25594181
    303183 4wqf:AO (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 25594181
    303184 4wqf:AP (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 25594181
    303185 4wqf:AP (2.8) BS02 MG ? GO:0003735 ... Q5SHQ7 25594181
    303186 4wqf:AP (2.8) BS03 MG ? GO:0003735 ... Q5SHQ7 25594181
    303187 4wqf:AP (2.8) BS04 MG ? GO:0003735 ... Q5SHQ7 25594181
    303188 4wqf:AQ (2.8) BS01 rna ? GO:0000049 ... P60489 25594181
    303189 4wqf:AQ (2.8) BS02 rna ? GO:0000049 ... P60489 25594181
    303190 4wqf:AQ (2.8) BS03 MG ? GO:0000049 ... P60489 25594181
    303191 4wqf:AQ (2.8) BS04 MG ? GO:0000049 ... P60489 25594181
    303192 4wqf:AR (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 25594181
    303193 4wqf:AR (2.8) BS02 MG ? GO:0003735 ... Q9Z9H5 25594181
    303194 4wqf:AR (2.8) BS03 MG ? GO:0003735 ... Q9Z9H5 25594181
    303195 4wqf:AS (2.8) BS01 rna ? GO:0003735 ... Q5SHQ4 25594181
    303196 4wqf:AS (2.8) BS02 rna ? GO:0003735 ... Q5SHQ4 25594181
    303197 4wqf:AT (2.8) BS01 rna ? GO:0003735 ... P60490 25594181
    303198 4wqf:AT (2.8) BS02 rna ? GO:0003735 ... P60490 25594181
    303199 4wqf:AU (2.8) BS01 rna ? GO:0000027 ... P60491 25594181
    303200 4wqf:AU (2.8) BS02 MG ? GO:0000027 ... P60491 25594181

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).