SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    30401 1m1k:C (3.2) BS02 MG ? GO:0002181 ... P20276 12150912
    30402 1m1k:D (3.2) BS01 rna ? GO:0003723 ... P20279 12150912
    30403 1m1k:E (3.2) BS01 rna ? GO:0003735 ... P12735 12150912
    30404 1m1k:F (3.2) BS01 rna ? GO:0000049 ... P14124 12150912
    30405 1m1k:F (3.2) BS02 rna ? GO:0000049 ... P14124 12150912
    30406 1m1k:G (3.2) BS01 rna ? GO:0002181 ... P14135 12150912
    30407 1m1k:H (3.2) BS01 rna ? GO:0001682 ... P12743 12150912
    30408 1m1k:J (3.2) BS01 rna ? GO:0000049 ... P60617 12150912
    30409 1m1k:K (3.2) BS01 rna ? GO:0003729 ... P29198 12150912
    30410 1m1k:L (3.2) BS01 rna ? GO:0003735 ... P22450 12150912
    30411 1m1k:M (3.2) BS01 rna ? GO:0003735 ... P12737 12150912
    30412 1m1k:N (3.2) BS01 rna ? GO:0002181 ... P60618 12150912
    30413 1m1k:O (3.2) BS01 rna ? GO:0000027 ... P14123 12150912
    30414 1m1k:O (3.2) BS02 rna ? GO:0000027 ... P14123 12150912
    30415 1m1k:P (3.2) BS01 rna ? GO:0003723 ... P12733 12150912
    30416 1m1k:Q (3.2) BS01 rna ? GO:0003723 ... P14119 12150912
    30417 1m1k:R (3.2) BS01 rna ? GO:0003735 ... P12734 12150912
    30418 1m1k:R (3.2) BS02 rna ? GO:0003735 ... P12734 12150912
    30419 1m1k:S (3.2) BS01 rna ? GO:0002181 ... P10970 12150912
    30420 1m1k:T (3.2) BS01 rna ? GO:0003735 ... P12732 12150912
    30421 1m1k:U (3.2) BS01 rna ? GO:0003723 ... P10972 12150912
    30422 1m1k:U (3.2) BS02 MG ? GO:0003723 ... P10972 12150912
    30423 1m1k:V (3.2) BS01 rna ? GO:0003735 ... P14116 12150912
    30424 1m1k:W (3.2) BS01 rna ? GO:0003735 ... P10971 12150912
    30425 1m1k:X (3.2) BS01 rna ? GO:0000463 ... P14121 12150912
    30426 1m1k:X (3.2) BS02 rna ? GO:0000463 ... P14121 12150912
    30427 1m1k:Y (3.2) BS01 rna ? GO:0002181 ... P18138 12150912
    30428 1m1k:Z (3.2) BS01 rna ? GO:0000166 ... P12736 12150912
    30429 1m1k:Z (3.2) BS02 MG ? GO:0000166 ... P12736 12150912
    30430 1m1n:A (1.16) BS01 CFN 1.18.6.1 GO:0005524 ... P07328 12215645
    30431 1m1n:A (1.16) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12215645
    30432 1m1n:B (1.16) BS01 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30433 1m1n:B (1.16) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 12215645
    30434 1m1n:B (1.16) BS03 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30435 1m1n:C (1.16) BS01 CFN 1.18.6.1 GO:0005524 ... P07328 12215645
    30436 1m1n:C (1.16) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12215645
    30437 1m1n:D (1.16) BS01 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30438 1m1n:D (1.16) BS02 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30439 1m1n:D (1.16) BS03 CLF 1.18.6.1 GO:0005524 ... P07329 12215645
    30440 1m1n:E (1.16) BS01 CFN 1.18.6.1 GO:0005524 ... P07328 12215645
    30441 1m1n:E (1.16) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12215645
    30442 1m1n:F (1.16) BS01 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30443 1m1n:F (1.16) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 12215645
    30444 1m1n:F (1.16) BS03 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30445 1m1n:G (1.16) BS01 CFN 1.18.6.1 GO:0005524 ... P07328 12215645
    30446 1m1n:G (1.16) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12215645
    30447 1m1n:H (1.16) BS01 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30448 1m1n:H (1.16) BS02 CA 1.18.6.1 GO:0005524 ... P07329 12215645
    30449 1m1n:H (1.16) BS03 CLF 1.18.6.1 GO:0005524 ... P07329 12215645
    30450 1m1o:A (1.95) BS01 CAA 2.3.1.9 GO:0003985 ... P07097 12501183
    30451 1m1o:B (1.95) BS01 CAA 2.3.1.9 GO:0003985 ... P07097 12501183
    30452 1m1p:A (1.55) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30453 1m1p:A (1.55) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30454 1m1p:A (1.55) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30455 1m1p:A (1.55) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30456 1m1p:B (1.55) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30457 1m1p:B (1.55) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30458 1m1p:B (1.55) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30459 1m1p:B (1.55) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30460 1m1p:C (1.55) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30461 1m1p:C (1.55) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30462 1m1p:C (1.55) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30463 1m1p:C (1.55) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30464 1m1p:D (1.55) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30465 1m1p:D (1.55) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30466 1m1p:D (1.55) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30467 1m1p:D (1.55) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30468 1m1p:E (1.55) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30469 1m1p:E (1.55) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30470 1m1p:E (1.55) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30471 1m1p:E (1.55) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30472 1m1p:E (1.55) BS05 HEC ? GO:0042597 ... Q8EDL6 12080059
    30473 1m1p:F (1.55) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30474 1m1p:F (1.55) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30475 1m1p:F (1.55) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30476 1m1p:F (1.55) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30477 1m1p:F (1.55) BS05 HEC ? GO:0042597 ... Q8EDL6 12080059
    30478 1m1q:A (0.97) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30479 1m1q:A (0.97) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30480 1m1q:A (0.97) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30481 1m1q:A (0.97) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30482 1m1r:A (1.02) BS01 HEC ? GO:0042597 ... Q8EDL6 12080059
    30483 1m1r:A (1.02) BS02 HEC ? GO:0042597 ... Q8EDL6 12080059
    30484 1m1r:A (1.02) BS03 HEC ? GO:0042597 ... Q8EDL6 12080059
    30485 1m1r:A (1.02) BS04 HEC ? GO:0042597 ... Q8EDL6 12080059
    30486 1m1u:A (2.3) BS01 CA ? N/A P11215 11034990
    30487 1m1x:A (3.3) BS01 MN ? GO:0001525 ... P06756 11884718
    30488 1m1x:A (3.3) BS02 MN ? GO:0001525 ... P06756 11884718
    30489 1m1x:A (3.3) BS03 MN ? GO:0001525 ... P06756 11884718
    30490 1m1x:A (3.3) BS04 MN ? GO:0001525 ... P06756 11884718
    30491 1m1x:A (3.3) BS05 MN ? GO:0001525 ... P06756 11884718
    30492 1m1x:B (3.3) BS01 MN ? GO:0001618 ... P05106 11884718
    30493 1m1y:A (3.2) BS01 CFM 1.18.6.1 GO:0005524 ... P07328 12501184
    30494 1m1y:A (3.2) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12501184
    30495 1m1y:B (3.2) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 12501184
    30496 1m1y:B (3.2) BS02 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30497 1m1y:B (3.2) BS03 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30498 1m1y:C (3.2) BS01 CFM 1.18.6.1 GO:0005524 ... P07328 12501184
    30499 1m1y:C (3.2) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12501184
    30500 1m1y:D (3.2) BS01 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30501 1m1y:D (3.2) BS02 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30502 1m1y:D (3.2) BS03 CLF 1.18.6.1 GO:0005524 ... P07329 12501184
    30503 1m1y:E (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30504 1m1y:F (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30505 1m1y:G (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30506 1m1y:H (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30507 1m1y:I (3.2) BS01 CFM 1.18.6.1 GO:0005524 ... P07328 12501184
    30508 1m1y:I (3.2) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12501184
    30509 1m1y:J (3.2) BS01 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30510 1m1y:J (3.2) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 12501184
    30511 1m1y:J (3.2) BS03 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30512 1m1y:K (3.2) BS01 CFM 1.18.6.1 GO:0005524 ... P07328 12501184
    30513 1m1y:K (3.2) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 12501184
    30514 1m1y:L (3.2) BS01 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30515 1m1y:L (3.2) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 12501184
    30516 1m1y:L (3.2) BS03 CA 1.18.6.1 GO:0005524 ... P07329 12501184
    30517 1m1y:M (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30518 1m1y:N (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30519 1m1y:O (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30520 1m1y:P (3.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    30521 1m20:A (1.8) BS01 HEM ? GO:0020037 ... P00171 12199707
    30522 1m21:A (1.8) BS01 peptide 3.5.1.- GO:0016787 ... Q8RJN5 12367528
    30523 1m21:B (1.8) BS01 peptide 3.5.1.- GO:0016787 ... Q8RJN5 12367528
    30524 1m26:A (1.62) BS01 peptide ? GO:0019862 ... P18670 12206779
    30525 1m26:A (1.62) BS02 peptide ? GO:0019862 ... P18670 12206779
    30526 1m26:A (1.62) BS03 peptide ? GO:0019862 ... P18670 12206779
    30527 1m26:C (1.62) BS01 peptide ? GO:0019862 ... P18670 12206779
    30528 1m26:C (1.62) BS02 peptide ? GO:0019862 ... P18670 12206779
    30529 1m26:C (1.62) BS03 peptide ? GO:0019862 ... P18670 12206779
    30530 1m26:E (1.62) BS01 peptide ? GO:0019862 ... P18670 12206779
    30531 1m26:E (1.62) BS02 peptide ? GO:0019862 ... P18670 12206779
    30532 1m26:E (1.62) BS03 peptide ? GO:0019862 ... P18670 12206779
    30533 1m26:G (1.62) BS01 peptide ? GO:0019862 ... P18670 12206779
    30534 1m26:G (1.62) BS02 peptide ? GO:0019862 ... P18670 12206779
    30535 1m26:G (1.62) BS03 peptide ? GO:0019862 ... P18670 12206779
    30536 1m27:A (2.5) BS01 peptide ? GO:0005737 ... O60880 12545174
    30537 1m2a:A (1.5) BS01 FES ? GO:0046872 ... O66511 12089152
    30538 1m2a:B (1.5) BS01 FES ? GO:0046872 ... O66511 12089152
    30539 1m2b:A (1.25) BS01 FES ? GO:0046872 ... O66511 12089152
    30540 1m2b:B (1.25) BS01 FES ? GO:0046872 ... O66511 12089152
    30541 1m2d:A (1.05) BS01 FES ? GO:0046872 ... O66511 12089152
    30542 1m2d:B (1.05) BS01 FES ? GO:0046872 ... O66511 12089152
    30543 1m2g:A (1.7) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 12091395
    30544 1m2g:A (1.7) BS02 APR 2.3.1.286 GO:0005737 ... O28597 12091395
    30545 1m2h:A (1.8) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 12091395
    30546 1m2h:A (1.8) BS02 APR 2.3.1.286 GO:0005737 ... O28597 12091395
    30547 1m2i:A (1.8) BS01 HEM ? GO:0020037 ... P00171 N/A
    30548 1m2j:A (1.7) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 12091395
    30549 1m2j:A (1.7) BS02 APR 2.3.1.286 GO:0005737 ... O28597 12091395
    30550 1m2k:A (1.47) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 12091395
    30551 1m2k:A (1.47) BS02 APR 2.3.1.286 GO:0005737 ... O28597 12091395
    30552 1m2m:A (1.8) BS01 HEM ? GO:0020037 ... P00171 N/A
    30553 1m2n:A (2.6) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 12091395
    30554 1m2n:A (2.6) BS02 OAD 2.3.1.286 GO:0005737 ... O28597 12091395
    30555 1m2n:B (2.6) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 12091395
    30556 1m2n:B (2.6) BS02 OAD 2.3.1.286 GO:0005737 ... O28597 12091395
    30557 1m2o:A (2.5) BS01 ZN ? GO:0000139 ... P15303 12239560
    30558 1m2o:A (2.5) BS02 GNP ? GO:0000139 ... P15303 12239560
    30559 1m2o:B (2.5) BS01 MG 3.6.5.- GO:0000139 ... P20606 12239560
    30560 1m2o:B (2.5) BS02 GNP 3.6.5.- GO:0000139 ... P20606 12239560
    30561 1m2o:C (2.5) BS01 ZN ? GO:0000139 ... P15303 12239560
    30562 1m2o:D (2.5) BS01 MG 3.6.5.- GO:0000139 ... P20606 12239560
    30563 1m2o:D (2.5) BS02 GNP 3.6.5.- GO:0000139 ... P20606 12239560
    30564 1m2p:A (2.0) BS01 HNA 2.7.11.1 GO:0004672 ... P28523 12419810 BindingDB: Ki=780nM
    30565 1m2q:A (1.79) BS01 MNX 2.7.11.1 GO:0004672 ... P28523 12419810 BindingDB: Ki=800nM
    30566 1m2r:A (1.7) BS01 MNY 2.7.11.1 GO:0004672 ... P28523 12419810 BindingDB: Ki=350nM
    30567 1m2t:A (1.89) BS01 ADE 3.2.2.22 GO:0017148 ... P81446 12351890
    30568 1m2v:A (2.75) BS01 ZN ? GO:0000139 ... P15303 12239560
    30569 1m2v:B (2.75) BS01 ZN ? GO:0000139 ... P40482 12239560
    30570 1m2w:A (1.8) BS01 NAD 1.1.1.67 GO:0000166 ... O08355 12196534
    30571 1m2w:A (1.8) BS02 MTL 1.1.1.67 GO:0000166 ... O08355 12196534
    30572 1m2w:B (1.8) BS01 NAD 1.1.1.67 GO:0000166 ... O08355 12196534
    30573 1m2w:B (1.8) BS02 MTL 1.1.1.67 GO:0000166 ... O08355 12196534
    30574 1m2x:A (1.5) BS01 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30575 1m2x:A (1.5) BS02 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30576 1m2x:A (1.5) BS03 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30577 1m2x:A (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    30578 1m2x:B (1.5) BS01 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30579 1m2x:B (1.5) BS02 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30580 1m2x:B (1.5) BS03 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30581 1m2x:B (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    30582 1m2x:C (1.5) BS01 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30583 1m2x:C (1.5) BS02 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30584 1m2x:C (1.5) BS03 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30585 1m2x:C (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    30586 1m2x:D (1.5) BS01 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30587 1m2x:D (1.5) BS02 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30588 1m2x:D (1.5) BS03 ZN 3.5.2.6 GO:0008270 ... O08498 12684522
    30589 1m2x:D (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    30590 1m2z:A (2.5) BS01 peptide ? N/A P04150 12151000
    30591 1m2z:A (2.5) BS02 DEX ? N/A P04150 12151000 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    30592 1m2z:D (2.5) BS01 peptide ? N/A P04150 12151000
    30593 1m2z:D (2.5) BS02 DEX ? N/A P04150 12151000 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    30594 1m32:A (2.2) BS01 PLP 2.6.1.37 GO:0008483 ... P96060 12403617
    30595 1m32:A (2.2) BS02 POA 2.6.1.37 GO:0008483 ... P96060 12403617
    30596 1m32:B (2.2) BS01 PLP 2.6.1.37 GO:0008483 ... P96060 12403617
    30597 1m32:B (2.2) BS02 PO4 2.6.1.37 GO:0008483 ... P96060 12403617
    30598 1m32:B (2.2) BS03 PLP 2.6.1.37 GO:0008483 ... P96060 12403617
    30599 1m32:C (2.2) BS01 PLP 2.6.1.37 GO:0008483 ... P96060 12403617
    30600 1m32:C (2.2) BS02 POA 2.6.1.37 GO:0008483 ... P96060 12403617

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).