SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    31001 1loc:F (2.05) BS01 peptide ? GO:0030246 ... P12306 8144527
    31002 1loc:G (2.05) BS01 peptide ? GO:0005515 ... P04122 8144527
    31003 1loc:G (2.05) BS02 CA ? GO:0005515 ... P04122 8144527
    31004 1loc:G (2.05) BS03 MN ? GO:0005515 ... P04122 8144527
    31005 1loc:H (2.05) BS01 peptide ? GO:0030246 ... P12306 8144527
    31006 1lod:A (2.05) BS01 CA ? GO:0005515 ... P04122 8144527
    31007 1lod:A (2.05) BS02 MN ? GO:0005515 ... P04122 8144527
    31008 1lod:A (2.05) BS03 MUR ? GO:0005515 ... P04122 8144527
    31009 1lod:B (2.05) BS01 MUR ? GO:0030246 ... P12306 8144527
    31010 1lod:C (2.05) BS01 CA ? GO:0005515 ... P04122 8144527
    31011 1lod:C (2.05) BS02 MN ? GO:0005515 ... P04122 8144527
    31012 1lod:C (2.05) BS03 MUR ? GO:0005515 ... P04122 8144527
    31013 1lod:D (2.05) BS01 MUR ? GO:0030246 ... P12306 8144527
    31014 1lod:E (2.05) BS01 CA ? GO:0005515 ... P04122 8144527
    31015 1lod:E (2.05) BS02 MN ? GO:0005515 ... P04122 8144527
    31016 1lod:E (2.05) BS03 MUR ? GO:0005515 ... P04122 8144527
    31017 1lod:F (2.05) BS01 MUR ? GO:0030246 ... P12306 8144527
    31018 1lod:G (2.05) BS01 CA ? GO:0005515 ... P04122 8144527
    31019 1lod:G (2.05) BS02 MN ? GO:0005515 ... P04122 8144527
    31020 1lod:G (2.05) BS03 MUR ? GO:0005515 ... P04122 8144527
    31021 1lod:H (2.05) BS01 MUR ? GO:0030246 ... P12306 8144527
    31022 1loe:A (1.9) BS01 CA ? GO:0005515 ... P04122 2380988
    31023 1loe:A (1.9) BS02 MN ? GO:0005515 ... P04122 2380988
    31024 1loe:C (1.9) BS01 CA ? GO:0005515 ... P04122 2380988
    31025 1loe:C (1.9) BS02 MN ? GO:0005515 ... P04122 2380988
    31026 1lof:A (2.3) BS01 MAN ? GO:0005515 ... P04122 1730588
    31027 1lof:A (2.3) BS02 CA ? GO:0005515 ... P04122 1730588
    31028 1lof:A (2.3) BS03 MN ? GO:0005515 ... P04122 1730588
    31029 1lof:B (2.3) BS01 MAN ? GO:0030246 ... P12306 1730588
    31030 1lof:C (2.3) BS01 MAN ? GO:0005515 ... P04122 1730588
    31031 1lof:C (2.3) BS02 CA ? GO:0005515 ... P04122 1730588
    31032 1lof:C (2.3) BS03 MN ? GO:0005515 ... P04122 1730588
    31033 1lof:D (2.3) BS01 MAN ? GO:0030246 ... P12306 1730588
    31034 1log:A (2.1) BS01 MAN ? GO:0005515 ... P04122 2211692
    31035 1log:A (2.1) BS02 CA ? GO:0005515 ... P04122 2211692
    31036 1log:A (2.1) BS03 MN ? GO:0005515 ... P04122 2211692
    31037 1log:B (2.1) BS01 MAN ? GO:0030246 ... P12306 2211692
    31038 1log:C (2.1) BS01 MAN ? GO:0005515 ... P04122 2211692
    31039 1log:C (2.1) BS02 CA ? GO:0005515 ... P04122 2211692
    31040 1log:C (2.1) BS03 MN ? GO:0005515 ... P04122 2211692
    31041 1log:D (2.1) BS01 MAN ? GO:0030246 ... P12306 2211692
    31042 1loh:A (2.0) BS01 BDP 4.2.2.1 GO:0005576 ... Q54873 11991948
    31043 1loh:A (2.0) BS02 BDP 4.2.2.1 GO:0005576 ... Q54873 11991948
    31044 1loh:A (2.0) BS03 BDP 4.2.2.1 GO:0005576 ... Q54873 11991948
    31045 1loj:A (1.9) BS01 U ? GO:0000398 ... O26745 12649441
    31046 1loj:B (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31047 1loj:C (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31048 1loj:D (1.9) BS01 U ? GO:0000398 ... O26745 12649441
    31049 1loj:E (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31050 1loj:F (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31051 1loj:G (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31052 1loj:H (1.9) BS01 U ? GO:0000398 ... O26745 12649441
    31053 1loj:I (1.9) BS01 U ? GO:0000398 ... O26745 12649441
    31054 1loj:J (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31055 1loj:K (1.9) BS01 U ? GO:0000398 ... O26745 12649441
    31056 1loj:L (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31057 1loj:M (1.9) BS01 URI ? GO:0000398 ... O26745 12649441
    31058 1loj:N (1.9) BS01 U ? GO:0000398 ... O26745 12649441
    31059 1lok:A (1.2) BS01 ZN 3.4.11.10 GO:0006508 ... Q01693 12176384
    31060 1lok:A (1.2) BS02 ZN 3.4.11.10 GO:0006508 ... Q01693 12176384
    31061 1lok:A (1.2) BS03 NA 3.4.11.10 GO:0006508 ... Q01693 12176384
    31062 1lok:A (1.2) BS04 SCN 3.4.11.10 GO:0006508 ... Q01693 12176384
    31063 1lol:A (1.9) BS01 BU2 4.1.1.23 GO:0004590 ... O26232 12011084
    31064 1lol:A (1.9) BS02 XMP 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=0.41uM
    31065 1lol:B (1.9) BS01 BU2 4.1.1.23 GO:0004590 ... O26232 12011084
    31066 1lol:B (1.9) BS02 XMP 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=0.41uM
    31067 1lom:A (1.72) BS01 CA ? GO:0030246 ... P81180 12054761
    31068 1lon:A (2.1) BS01 MG 6.3.4.4 GO:0000166 ... P28650 12004071
    31069 1lon:A (2.1) BS02 IMO 6.3.4.4 GO:0000166 ... P28650 12004071
    31070 1lon:A (2.1) BS03 HDA 6.3.4.4 GO:0000166 ... P28650 12004071
    31071 1lon:A (2.1) BS04 GDP 6.3.4.4 GO:0000166 ... P28650 12004071
    31072 1loo:A (2.2) BS01 GTP 6.3.4.4 GO:0000166 ... P28650 12004071
    31073 1lop:A (1.8) BS01 peptide 5.2.1.8 GO:0000413 ... P23869 8601841
    31074 1loq:A (1.5) BS01 U 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=0.2mM
    31075 1lor:A (1.6) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=8.8pM
    31076 1los:A (1.9) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31077 1los:A (1.9) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31078 1los:B (1.9) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31079 1los:B (1.9) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31080 1los:C (1.9) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31081 1los:C (1.9) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31082 1los:D (1.9) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31083 1los:D (1.9) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=64nM
    BindingDB: Ki=12400nM
    31084 1lot:B (2.5) BS01 ATP 3.6.4.- GO:0000287 ... P68135 12119014
    31085 1lov:A (1.55) BS01 3GP 4.6.1.24 GO:0001411 ... P00651 12122018
    31086 1low:A (1.9) BS01 3GP 4.6.1.24 GO:0001411 ... P00651 12122018
    31087 1lox:A (2.4) BS01 FE2 1.13.11.-
    1.13.11.12
    1.13.11.31
    1.13.11.33
    GO:0001503 ... P12530 9406550
    31088 1lox:A (2.4) BS02 RS7 1.13.11.-
    1.13.11.12
    1.13.11.31
    1.13.11.33
    GO:0001503 ... P12530 9406550 MOAD: Ki=3uM
    31089 1loy:A (1.55) BS01 3GP 4.6.1.24 GO:0001411 ... P00651 12122018
    31090 1lp1:B (2.3) BS01 MG ? GO:0019865 ... P38507 12604795
    31091 1lp4:A (1.86) BS01 MG 2.7.11.1 GO:0004672 ... P28523 15740749
    31092 1lp4:A (1.86) BS02 ANP 2.7.11.1 GO:0004672 ... P28523 15740749
    31093 1lp6:A (1.9) BS01 C5P 4.1.1.23 GO:0004590 ... O26232 12011084
    31094 1lp6:B (1.9) BS01 C5P 4.1.1.23 GO:0004590 ... O26232 12011084
    31095 1lp9:A (2.0) BS01 peptide ? N/A P04439 14563323
    31096 1lp9:E (2.0) BS01 peptide ? N/A P01849 14563323
    31097 1lp9:H (2.0) BS01 peptide ? N/A P04439 14563323
    31098 1lp9:L (2.0) BS01 peptide ? N/A P01849 14563323
    31099 1lpa:B (3.04) BS01 CA 3.1.1.3 GO:0001523 ... P16233 8479519
    31100 1lpb:B (2.46) BS01 CA 3.1.1.3 GO:0001523 ... P16233 7893686
    31101 1lpb:B (2.46) BS02 MUP 3.1.1.3 GO:0001523 ... P16233 7893686
    31102 1lpc:A (1.7) BS01 CMP 3.2.2.22 GO:0017148 ... P24476 15553110
    31103 1lpd:A (1.7) BS01 ADE 3.2.2.22 GO:0017148 ... P24476 15553110
    31104 1lpf:A (2.8) BS01 FAD 1.8.1.4 GO:0004148 ... P14218 8487301
    31105 1lpf:A (2.8) BS02 FAD 1.8.1.4 GO:0004148 ... P14218 8487301
    31106 1lpf:B (2.8) BS01 FAD 1.8.1.4 GO:0004148 ... P14218 8487301
    31107 1lpg:B (2.0) BS01 CA 3.4.21.6 GO:0004252 ... P00742 12061878
    31108 1lpg:B (2.0) BS02 IMA 3.4.21.6 GO:0004252 ... P00742 12061878 MOAD: Ki=82nM
    BindingDB: Ki=82nM
    31109 1lph:B (2.3) BS01 peptide ? GO:0005179 ... P01308 8590022
    31110 1lph:D (2.3) BS01 peptide ? GO:0005179 ... P01308 8590022
    31111 1lpi:A (2.0) BS01 NA 3.2.1.17 GO:0003796 ... P00698 9828016
    31112 1lpk:B (2.2) BS01 CA 3.4.21.6 GO:0004252 ... P00742 12061878
    31113 1lpk:B (2.2) BS02 CBB 3.4.21.6 GO:0004252 ... P00742 12061878 MOAD: Ki=28nM
    31114 1lpm:A (2.18) BS01 MPA 3.1.1.3 N/A P20261 N/A
    31115 1lpn:A (2.18) BS01 DSC 3.1.1.3 N/A P20261 8142346
    31116 1lpn:A (2.18) BS02 DSC 3.1.1.3 N/A P20261 8142346
    31117 1lpo:A (2.18) BS01 HDS 3.1.1.3 N/A P20261 8142346
    31118 1lpp:A (2.18) BS01 HDS 3.1.1.3 N/A P20261 8142346
    31119 1lpp:A (2.18) BS02 HDS 3.1.1.3 N/A P20261 8142346
    31120 1lpq:A (3.14) BS01 dna 5.6.2.1 GO:0003677 ... P11387 12209008
    31121 1lpq:A (3.14) BS02 dna 5.6.2.1 GO:0003677 ... P11387 12209008
    31122 1lps:A (2.18) BS01 MPC 3.1.1.3 N/A P20261 N/A
    31123 1lpv:A (-1.00) BS01 ZN ? GO:0005634 ... P23023 10898790
    31124 1lpv:A (-1.00) BS02 ZN ? GO:0005634 ... P23023 10898790
    31125 1lpz:B (2.4) BS01 CA 3.4.21.6 GO:0004252 ... P00742 12061878
    31126 1lpz:B (2.4) BS02 CMB 3.4.21.6 GO:0004252 ... P00742 12061878 MOAD: Ki=25nM
    BindingDB: Ki=25nM
    31127 1lq1:A (2.3) BS01 dna ? GO:0003677 ... P06534 12176382
    31128 1lq1:A (2.3) BS02 dna ? GO:0003677 ... P06534 12176382
    31129 1lq1:B (2.3) BS01 dna ? GO:0003677 ... P06534 12176382
    31130 1lq1:C (2.3) BS01 dna ? GO:0003677 ... P06534 12176382
    31131 1lq1:D (2.3) BS01 dna ? GO:0003677 ... P06534 12176382
    31132 1lq1:D (2.3) BS02 dna ? GO:0003677 ... P06534 12176382
    31133 1lq2:A (2.7) BS01 IDD 3.2.1.21 GO:0004553 ... Q9XEI3 14597633
    31134 1lq8:A (2.4) BS01 peptide ? GO:0004867 ... P05154 12575940
    31135 1lq8:A (2.4) BS02 peptide ? GO:0004867 ... P05154 12575940
    31136 1lq8:C (2.4) BS01 peptide ? GO:0004867 ... P05154 12575940
    31137 1lq8:E (2.4) BS01 peptide ? GO:0004867 ... P05154 12575940
    31138 1lq8:E (2.4) BS02 peptide ? GO:0004867 ... P05154 12575940
    31139 1lq8:G (2.4) BS01 peptide ? GO:0004867 ... P05154 12575940
    31140 1lqa:A (1.604) BS01 NDP ? GO:0005829 ... P0A9T4 14519207
    31141 1lqa:B (1.604) BS01 NDP ? GO:0005829 ... P0A9T4 14519207
    31142 1lqb:C (2.0) BS01 peptide ? N/A P40337 12050673
    31143 1lqd:B (2.7) BS01 CA 3.4.21.6 GO:0004252 ... P00742 12061878
    31144 1lqd:B (2.7) BS02 CMI 3.4.21.6 GO:0004252 ... P00742 12061878 BindingDB: Ki=9nM
    31145 1lqe:A (2.2) BS01 CA 3.4.21.4 GO:0004252 ... P00760 12061878
    31146 1lqe:A (2.2) BS02 IMA 3.4.21.4 GO:0004252 ... P00760 12061878 MOAD: Ki=1507nM
    31147 1lqf:A (2.5) BS01 BGD 3.1.3.48 GO:0004725 ... P18031 12119018
    31148 1lqf:B (2.5) BS01 BGD 3.1.3.48 GO:0004725 ... P18031 12119018
    31149 1lqf:C (2.5) BS01 BGD 3.1.3.48 GO:0004725 ... P18031 12119018
    31150 1lqf:D (2.5) BS01 BGD 3.1.3.48 GO:0004725 ... P18031 12119018
    31151 1lqk:A (1.35) BS01 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31152 1lqk:A (1.35) BS02 MN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31153 1lqk:B (1.35) BS01 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31154 1lqk:B (1.35) BS02 MN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31155 1lqo:A (2.0) BS01 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31156 1lqo:A (2.0) BS02 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31157 1lqo:A (2.0) BS03 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31158 1lqo:A (2.0) BS04 MN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31159 1lqo:B (2.0) BS01 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31160 1lqo:B (2.0) BS02 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31161 1lqo:B (2.0) BS03 PO4 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31162 1lqo:B (2.0) BS04 MN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31163 1lqp:A (1.19) BS01 MN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31164 1lqp:A (1.19) BS02 FCN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31165 1lqp:A (1.19) BS03 FCN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31166 1lqp:A (1.19) BS04 FCN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31167 1lqp:B (1.19) BS01 FCN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31168 1lqp:B (1.19) BS02 MN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31169 1lqp:B (1.19) BS03 FCN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31170 1lqp:B (1.19) BS04 FCN 2.5.1.18 GO:0004364 ... Q9I4K6 12224946
    31171 1lqt:A (1.05) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31172 1lqt:A (1.05) BS02 ODP 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31173 1lqt:B (1.05) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31174 1lqt:B (1.05) BS02 ODP 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31175 1lqu:A (1.25) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31176 1lqu:A (1.25) BS02 NDP 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31177 1lqu:B (1.25) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31178 1lqu:B (1.25) BS02 NDP 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    31179 1lqv:C (1.6) BS01 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31180 1lqv:C (1.6) BS02 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31181 1lqv:C (1.6) BS03 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31182 1lqv:C (1.6) BS04 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31183 1lqv:C (1.6) BS05 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31184 1lqv:C (1.6) BS06 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31185 1lqv:D (1.6) BS01 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31186 1lqv:D (1.6) BS02 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31187 1lqv:D (1.6) BS03 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31188 1lqv:D (1.6) BS04 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31189 1lqv:D (1.6) BS05 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31190 1lqv:D (1.6) BS06 CA 3.4.21.69 GO:0005509 ... P04070 12034704
    31191 1lqw:A (1.87) BS01 ZN 3.5.1.88 GO:0006412 ... P68826 12126617
    31192 1lqw:B (1.87) BS01 ZN 3.5.1.88 GO:0006412 ... P68826 12126617
    31193 1lqx:A (1.8) BS01 HEM ? GO:0020037 ... P00171 12136141
    31194 1lqy:A (1.9) BS01 BB2 3.5.1.88 GO:0006412 ... O31410 12126617
    31195 1lr5:A (1.9) BS01 MAN ? GO:0000911 ... P13689 12065401
    31196 1lr5:A (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31197 1lr5:A (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401
    31198 1lr5:B (1.9) BS01 MAN ? GO:0000911 ... P13689 12065401
    31199 1lr5:B (1.9) BS02 MAN ? GO:0000911 ... P13689 12065401
    31200 1lr5:B (1.9) BS03 ZN ? GO:0000911 ... P13689 12065401

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).