SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3001 1ani:B (2.5) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3002 1ani:B (2.5) BS03 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3003 1ani:B (2.5) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 7473737
    3004 1ani:B (2.5) BS05 PO4 3.1.3.1 GO:0000287 ... P00634 7473737
    3005 1anj:A (2.3) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3006 1anj:A (2.3) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3007 1anj:A (2.3) BS03 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3008 1anj:A (2.3) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 7473737
    3009 1anj:A (2.3) BS05 PO4 3.1.3.1 GO:0000287 ... P00634 7473737
    3010 1anj:B (2.3) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3011 1anj:B (2.3) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3012 1anj:B (2.3) BS03 ZN 3.1.3.1 GO:0000287 ... P00634 7473737
    3013 1anj:B (2.3) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 7473737
    3014 1anj:B (2.3) BS05 PO4 3.1.3.1 GO:0000287 ... P00634 7473737
    3015 1ank:A (2.0) BS01 AMP 2.7.4.3 GO:0000287 ... P69441 7937733
    3016 1ank:A (2.0) BS02 ANP 2.7.4.3 GO:0000287 ... P69441 7937733
    3017 1ank:B (2.0) BS01 AMP 2.7.4.3 GO:0000287 ... P69441 7937733
    3018 1ank:B (2.0) BS02 ANP 2.7.4.3 GO:0000287 ... P69441 7937733
    3019 1ann:A (2.3) BS01 CA ? GO:0001786 ... P13214 N/A
    3020 1ann:A (2.3) BS02 CA ? GO:0001786 ... P13214 N/A
    3021 1anv:A (2.7) BS01 ZN ? GO:0003677 ... P03265 15299602
    3022 1anv:A (2.7) BS02 ZN ? GO:0003677 ... P03265 15299602
    3023 1anw:A (2.4) BS01 CA ? GO:0001786 ... P08758 1446685
    3024 1anw:A (2.4) BS02 CA ? GO:0001786 ... P08758 1446685
    3025 1anw:B (2.4) BS01 CA ? GO:0001786 ... P08758 1446685
    3026 1anw:B (2.4) BS02 CA ? GO:0001786 ... P08758 1446685
    3027 1anx:A (1.9) BS01 CA ? GO:0001786 ... P08758 8254674
    3028 1anx:A (1.9) BS02 CA ? GO:0001786 ... P08758 8254674
    3029 1anx:A (1.9) BS03 CA ? GO:0001786 ... P08758 8254674
    3030 1anx:A (1.9) BS04 CA ? GO:0001786 ... P08758 8254674
    3031 1anx:B (1.9) BS01 CA ? GO:0001786 ... P08758 8254674
    3032 1anx:B (1.9) BS02 CA ? GO:0001786 ... P08758 8254674
    3033 1anx:B (1.9) BS03 CA ? GO:0001786 ... P08758 8254674
    3034 1anx:B (1.9) BS04 CA ? GO:0001786 ... P08758 8254674
    3035 1anx:C (1.9) BS01 CA ? GO:0001786 ... P08758 8254674
    3036 1anx:C (1.9) BS02 CA ? GO:0001786 ... P08758 8254674
    3037 1anx:C (1.9) BS03 CA ? GO:0001786 ... P08758 8254674
    3038 1anx:C (1.9) BS04 CA ? GO:0001786 ... P08758 8254674
    3039 1ao0:A (2.8) BS01 MG 2.4.2.14 GO:0000287 ... P00497 9271502
    3040 1ao0:A (2.8) BS02 SF4 2.4.2.14 GO:0000287 ... P00497 9271502
    3041 1ao0:A (2.8) BS03 5GP 2.4.2.14 GO:0000287 ... P00497 9271502
    3042 1ao0:A (2.8) BS04 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3043 1ao0:A (2.8) BS05 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3044 1ao0:B (2.8) BS01 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3045 1ao0:B (2.8) BS02 MG 2.4.2.14 GO:0000287 ... P00497 9271502
    3046 1ao0:B (2.8) BS03 SF4 2.4.2.14 GO:0000287 ... P00497 9271502
    3047 1ao0:B (2.8) BS04 5GP 2.4.2.14 GO:0000287 ... P00497 9271502
    3048 1ao0:B (2.8) BS05 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3049 1ao0:C (2.8) BS01 MG 2.4.2.14 GO:0000287 ... P00497 9271502
    3050 1ao0:C (2.8) BS02 SF4 2.4.2.14 GO:0000287 ... P00497 9271502
    3051 1ao0:C (2.8) BS03 5GP 2.4.2.14 GO:0000287 ... P00497 9271502
    3052 1ao0:C (2.8) BS04 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3053 1ao0:C (2.8) BS05 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3054 1ao0:D (2.8) BS01 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3055 1ao0:D (2.8) BS02 MG 2.4.2.14 GO:0000287 ... P00497 9271502
    3056 1ao0:D (2.8) BS03 SF4 2.4.2.14 GO:0000287 ... P00497 9271502
    3057 1ao0:D (2.8) BS04 5GP 2.4.2.14 GO:0000287 ... P00497 9271502
    3058 1ao0:D (2.8) BS05 ADP 2.4.2.14 GO:0000287 ... P00497 9271502
    3059 1ao7:A (2.6) BS01 peptide ? N/A P04439 8906788
    3060 1ao7:D (2.6) BS01 peptide ? GO:0005886 ... A0A075B6T6
    P01848
    8906788
    3061 1ao7:E (2.6) BS01 peptide ? N/A P01850 8906788
    3062 1ao8:A (-1.00) BS01 MTX 1.5.1.3 GO:0004146 ... P00381 9514736 BindingDB: IC50=16nM, Ki=0.004000nM
    3063 1aob:A (2.1) BS01 DDU 2.1.1.45 GO:0000287 ... P0A884 9687366
    3064 1aod:A (2.6) BS01 INS 4.6.1.13 GO:0004436 ... P34024 9367761
    3065 1aoe:A (1.6) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 9374515
    3066 1aoe:A (1.6) BS02 GW3 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: Ki=0.22nM
    BindingDB: IC50=4nM, Ki=0.22nM
    3067 1aoe:B (1.6) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 9374515
    3068 1aoe:B (1.6) BS02 GW3 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: Ki=0.22nM
    BindingDB: IC50=4nM, Ki=0.22nM
    3069 1aof:A (2.0) BS01 HEM 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3070 1aof:A (2.0) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3071 1aof:B (2.0) BS01 HEM 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3072 1aof:B (2.0) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3073 1aog:A (2.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8771196
    3074 1aog:B (2.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8771196
    3075 1aoi:A (2.8) BS01 dna ? GO:0000786 ... P02302 9305837
    3076 1aoi:A (2.8) BS02 dna ? GO:0000786 ... P02302 9305837
    3077 1aoi:B (2.8) BS01 dna ? GO:0003677 ... P62799 9305837
    3078 1aoi:B (2.8) BS02 dna ? GO:0003677 ... P62799 9305837
    3079 1aoi:C (2.8) BS01 dna ? GO:0000786 ... P06897 9305837
    3080 1aoi:C (2.8) BS02 dna ? GO:0000786 ... P06897 9305837
    3081 1aoi:D (2.8) BS01 dna ? GO:0000786 ... P02281 9305837
    3082 1aoi:D (2.8) BS02 dna ? GO:0000786 ... P02281 9305837
    3083 1aoi:E (2.8) BS01 dna ? GO:0000786 ... P02302 9305837
    3084 1aoi:E (2.8) BS02 dna ? GO:0000786 ... P02302 9305837
    3085 1aoi:F (2.8) BS01 dna ? GO:0003677 ... P62799 9305837
    3086 1aoi:F (2.8) BS02 dna ? GO:0003677 ... P62799 9305837
    3087 1aoi:G (2.8) BS01 dna ? GO:0000786 ... P06897 9305837
    3088 1aoi:G (2.8) BS02 dna ? GO:0000786 ... P06897 9305837
    3089 1aoi:H (2.8) BS01 dna ? GO:0000786 ... P02281 9305837
    3090 1aoi:H (2.8) BS02 dna ? GO:0000786 ... P02281 9305837
    3091 1aom:A (1.8) BS01 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3092 1aom:B (1.8) BS01 HEM 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3093 1aom:B (1.8) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3094 1aom:B (1.8) BS03 NO 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3095 1aon:A (3.0) BS01 ADP 5.6.1.7 GO:0000287 ... P0A6F5 9285585
    3096 1aon:B (3.0) BS01 ADP 5.6.1.7 GO:0000287 ... P0A6F5 9285585
    3097 1aon:C (3.0) BS01 ADP 5.6.1.7 GO:0000287 ... P0A6F5 9285585
    3098 1aon:D (3.0) BS01 ADP 5.6.1.7 GO:0000287 ... P0A6F5 9285585
    3099 1aon:E (3.0) BS01 ADP 5.6.1.7 GO:0000287 ... P0A6F5 9285585
    3100 1aon:F (3.0) BS01 ADP 5.6.1.7 GO:0000287 ... P0A6F5 9285585
    3101 1aon:G (3.0) BS01 ADP 5.6.1.7 GO:0000287 ... P0A6F5 9285585
    3102 1aoo:A (-1.00) BS01 AG N/A GO:0005507 ... P0CX80 8566237
    3103 1aoo:A (-1.00) BS02 AG N/A GO:0005507 ... P0CX80 8566237
    3104 1aoo:A (-1.00) BS03 AG N/A GO:0005507 ... P0CX80 8566237
    3105 1aoo:A (-1.00) BS04 AG N/A GO:0005507 ... P0CX80 8566237
    3106 1aoo:A (-1.00) BS05 AG N/A GO:0005507 ... P0CX80 8566237
    3107 1aoo:A (-1.00) BS06 AG N/A GO:0005507 ... P0CX80 8566237
    3108 1aoo:A (-1.00) BS07 AG N/A GO:0005507 ... P0CX80 8566237
    3109 1aop:A (1.6) BS01 PO4 1.8.1.2 GO:0004783 ... P17846 7569952
    3110 1aop:A (1.6) BS02 SF4 1.8.1.2 GO:0004783 ... P17846 7569952
    3111 1aop:A (1.6) BS03 SRM 1.8.1.2 GO:0004783 ... P17846 7569952
    3112 1aoq:A (1.8) BS01 HEM 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3113 1aoq:A (1.8) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3114 1aoq:B (1.8) BS01 HEM 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3115 1aoq:B (1.8) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 9311786
    3116 1aor:A (2.3) BS01 FE 1.2.7.5 GO:0009055 ... Q51739 7878465
    3117 1aor:A (2.3) BS02 SF4 1.2.7.5 GO:0009055 ... Q51739 7878465
    3118 1aor:A (2.3) BS03 PTE 1.2.7.5 GO:0009055 ... Q51739 7878465
    3119 1aor:B (2.3) BS01 FE 1.2.7.5 GO:0009055 ... Q51739 7878465
    3120 1aor:B (2.3) BS02 SF4 1.2.7.5 GO:0009055 ... Q51739 7878465
    3121 1aor:B (2.3) BS03 PTE 1.2.7.5 GO:0009055 ... Q51739 7878465
    3122 1aot:F (-1.00) BS01 peptide 2.7.10.2 N/A P06241 9351806
    3123 1aou:F (-1.00) BS01 peptide 2.7.10.2 N/A P06241 9351806
    3124 1aox:A (2.1) BS01 MG ? N/A P17301 9353312
    3125 1aox:B (2.1) BS01 MG ? N/A P17301 9353312
    3126 1aoz:A (1.9) BS01 CU 1.10.3.3 GO:0005507 ... P37064 1548698
    3127 1aoz:B (1.9) BS01 CU 1.10.3.3 GO:0005507 ... P37064 1548698
    3128 1ap4:A (-1.00) BS01 CA ? GO:0005509 ... P63316 9315850
    3129 1ap5:A (2.2) BS01 MN 1.15.1.1 GO:0004784 ... P04179 9537987
    3130 1ap5:B (2.2) BS01 MN 1.15.1.1 GO:0004784 ... P04179 9537987
    3131 1ap6:A (1.9) BS01 MN 1.15.1.1 GO:0004784 ... P04179 9537987
    3132 1ap6:B (1.9) BS01 MN 1.15.1.1 GO:0004784 ... P04179 9537987
    3133 1ap8:A (-1.00) BS01 M7G ? GO:0000184 ... P07260 9302999
    3134 1ap9:A (2.35) BS01 RET ? GO:0005216 ... P02945 9287223
    3135 1apb:A (1.76) BS01 FCA ? GO:0015407 ... P02924 2204627 MOAD: Kd=1.51uM
    3136 1apb:A (1.76) BS02 FCB ? GO:0015407 ... P02924 2204627 MOAD: Kd=1.51uM
    3137 1aph:B (2.0) BS01 peptide ? GO:0005179 ... P01317 1477273
    3138 1aph:B (2.0) BS02 DCE ? GO:0005179 ... P01317 1477273
    3139 1apl:C (2.7) BS01 dna ? GO:0003677 ... P0CY08 1682054
    3140 1apl:C (2.7) BS02 dna ? GO:0003677 ... P0CY08 1682054
    3141 1apl:D (2.7) BS01 dna ? GO:0003677 ... P0CY08 1682054
    3142 1apl:D (2.7) BS02 dna ? GO:0003677 ... P0CY08 1682054
    3143 1apm:E (2.0) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 15299526
    3144 1apt:E (1.8) BS01 peptide 3.4.23.20 GO:0004190 ... P00798 N/A
    3145 1apu:E (1.8) BS01 peptide 3.4.23.20 GO:0004190 ... P00798 N/A
    3146 1apv:E (1.8) BS01 peptide 3.4.23.20 GO:0004190 ... P00798 1567842
    3147 1apv:E (1.8) BS02 MAN 3.4.23.20 GO:0004190 ... P00798 1567842
    3148 1apw:E (1.8) BS01 peptide 3.4.23.20 GO:0004190 ... P00798 1567842
    3149 1apw:E (1.8) BS02 MAN 3.4.23.20 GO:0004190 ... P00798 1567842
    3150 1apx:A (2.2) BS01 HEM 1.11.1.11 GO:0000302 ... P48534 7703247
    3151 1apx:B (2.2) BS01 HEM 1.11.1.11 GO:0000302 ... P48534 7703247
    3152 1apx:C (2.2) BS01 HEM 1.11.1.11 GO:0000302 ... P48534 7703247
    3153 1apx:D (2.2) BS01 HEM 1.11.1.11 GO:0000302 ... P48534 7703247
    3154 1apz:B (2.3) BS01 ASP 3.5.1.26 GO:0016787 ... P20933 8846222 BindingDB: Ki=600000nM
    3155 1apz:D (2.3) BS01 ASP 3.5.1.26 GO:0016787 ... P20933 8846222 BindingDB: Ki=600000nM
    3156 1aq1:A (2.0) BS01 STU 2.7.11.22 GO:0000082 ... P24941 9334743
    3157 1aq2:A (1.9) BS01 MN 4.1.1.49 GO:0000287 ... P22259 9406547
    3158 1aq2:A (1.9) BS02 ATP 4.1.1.49 GO:0000287 ... P22259 9406547
    3159 1aq2:A (1.9) BS03 PYR 4.1.1.49 GO:0000287 ... P22259 9406547
    3160 1aq3:A (2.8) BS01 rna ? GO:0003723 ... P03612 9469847
    3161 1aq3:C (2.8) BS01 rna ? GO:0003723 ... P03612 9469847
    3162 1aq4:A (3.0) BS01 rna ? GO:0003723 ... P03612 9469847
    3163 1aq4:C (3.0) BS01 rna ? GO:0003723 ... P03612 9469847
    3164 1aq7:A (2.2) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 N/A
    3165 1aq8:A (2.0) BS01 CU 1.7.2.1 GO:0005507 ... P38501 9353305
    3166 1aq8:A (2.0) BS02 CU 1.7.2.1 GO:0005507 ... P38501 9353305
    3167 1aq8:B (2.0) BS01 CU 1.7.2.1 GO:0005507 ... P38501 9353305
    3168 1aq8:B (2.0) BS02 CU 1.7.2.1 GO:0005507 ... P38501 9353305
    3169 1aq8:C (2.0) BS01 CU 1.7.2.1 GO:0005507 ... P38501 9353305
    3170 1aq8:C (2.0) BS02 CU 1.7.2.1 GO:0005507 ... P38501 9353305
    3171 1aqa:A (-1.00) BS01 HEM ? GO:0020037 ... P00173 9363779
    3172 1aqb:A (1.65) BS01 CD ? GO:0005501 ... P27485 9757135
    3173 1aqb:A (1.65) BS02 RTL ? GO:0005501 ... P27485 9757135
    3174 1aqc:A (2.3) BS01 peptide ? N/A Q02410 9321393
    3175 1aqc:B (2.3) BS01 peptide ? N/A Q02410 9321393
    3176 1aqd:A (2.45) BS01 peptide ? GO:0006955 ... P01903 9351812
    3177 1aqd:B (2.45) BS01 peptide ? GO:0006955 ... P01911 9351812
    3178 1aqd:D (2.45) BS01 peptide ? GO:0006955 ... P01903 9351812
    3179 1aqd:E (2.45) BS01 peptide ? GO:0006955 ... P01911 9351812
    3180 1aqd:G (2.45) BS01 peptide ? GO:0006955 ... P01903 9351812
    3181 1aqd:H (2.45) BS01 peptide ? GO:0006955 ... P01911 9351812
    3182 1aqd:J (2.45) BS01 peptide ? GO:0006955 ... P01903 9351812
    3183 1aqd:K (2.45) BS01 peptide ? GO:0006955 ... P01911 9351812
    3184 1aqe:A (2.2) BS01 HEM ? GO:0009055 ... P38554 9485359
    3185 1aqe:A (2.2) BS02 HEM ? GO:0009055 ... P38554 9485359
    3186 1aqe:A (2.2) BS03 HEM ? GO:0009055 ... P38554 9485359
    3187 1aqe:A (2.2) BS04 HEM ? GO:0009055 ... P38554 9485359
    3188 1aqf:A (2.7) BS01 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3189 1aqf:A (2.7) BS02 PEQ 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3190 1aqf:B (2.7) BS01 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3191 1aqf:B (2.7) BS02 PEQ 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3192 1aqf:C (2.7) BS01 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3193 1aqf:C (2.7) BS02 PEQ 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3194 1aqf:D (2.7) BS01 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3195 1aqf:D (2.7) BS02 PEQ 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3196 1aqf:E (2.7) BS01 PEQ 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3197 1aqf:F (2.7) BS01 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3198 1aqf:F (2.7) BS02 PEQ 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3199 1aqf:G (2.7) BS01 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890
    3200 1aqf:G (2.7) BS02 PEQ 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P11974 9308890

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).