SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    32001 1m32:F (2.2) BS02 PLP 2.6.1.37 GO:0019700 ... P96060 12403617
    32002 1m33:A (1.7) BS01 3OH 3.1.1.85 GO:0005515 ... P13001 12732651
    32003 1m34:A (2.3) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 12501184
    32004 1m34:A (2.3) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 12501184
    32005 1m34:B (2.3) BS01 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32006 1m34:B (2.3) BS02 CLF 1.18.6.1 GO:0009399 ... P07329 12501184
    32007 1m34:B (2.3) BS03 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32008 1m34:C (2.3) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 12501184
    32009 1m34:C (2.3) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 12501184
    32010 1m34:D (2.3) BS01 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32011 1m34:D (2.3) BS02 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32012 1m34:D (2.3) BS03 CLF 1.18.6.1 GO:0009399 ... P07329 12501184
    32013 1m34:E (2.3) BS01 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32014 1m34:E (2.3) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32015 1m34:E (2.3) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32016 1m34:E (2.3) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32017 1m34:F (2.3) BS01 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32018 1m34:F (2.3) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32019 1m34:F (2.3) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32020 1m34:F (2.3) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32021 1m34:F (2.3) BS05 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32022 1m34:G (2.3) BS01 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32023 1m34:G (2.3) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32024 1m34:G (2.3) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32025 1m34:G (2.3) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32026 1m34:H (2.3) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32027 1m34:H (2.3) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32028 1m34:H (2.3) BS03 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32029 1m34:H (2.3) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32030 1m34:I (2.3) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 12501184
    32031 1m34:I (2.3) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 12501184
    32032 1m34:J (2.3) BS01 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32033 1m34:J (2.3) BS02 CLF 1.18.6.1 GO:0009399 ... P07329 12501184
    32034 1m34:J (2.3) BS03 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32035 1m34:K (2.3) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 12501184
    32036 1m34:K (2.3) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 12501184
    32037 1m34:L (2.3) BS01 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32038 1m34:L (2.3) BS02 CA 1.18.6.1 GO:0009399 ... P07329 12501184
    32039 1m34:L (2.3) BS03 CLF 1.18.6.1 GO:0009399 ... P07329 12501184
    32040 1m34:M (2.3) BS01 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32041 1m34:M (2.3) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32042 1m34:M (2.3) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32043 1m34:M (2.3) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32044 1m34:N (2.3) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32045 1m34:N (2.3) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32046 1m34:N (2.3) BS03 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32047 1m34:N (2.3) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32048 1m34:O (2.3) BS01 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32049 1m34:O (2.3) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32050 1m34:O (2.3) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32051 1m34:O (2.3) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32052 1m34:P (2.3) BS01 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32053 1m34:P (2.3) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 12501184
    32054 1m34:P (2.3) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32055 1m34:P (2.3) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 12501184
    32056 1m34:P (2.3) BS05 ADP 1.18.6.1 GO:0005524 ... P00459 12501184
    32057 1m35:A (2.4) BS01 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32058 1m35:A (2.4) BS02 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32059 1m35:B (2.4) BS01 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32060 1m35:B (2.4) BS02 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32061 1m35:C (2.4) BS01 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32062 1m35:C (2.4) BS02 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32063 1m35:D (2.4) BS01 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32064 1m35:D (2.4) BS02 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32065 1m35:E (2.4) BS01 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32066 1m35:E (2.4) BS02 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32067 1m35:F (2.4) BS01 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32068 1m35:F (2.4) BS02 MN 3.4.11.9 GO:0004177 ... P15034 12777807
    32069 1m36:A (-1.00) BS01 ZN 2.3.1.48 GO:0004402 ... Q92794 N/A
    32070 1m38:A (1.8) BS01 CO 3.6.1.1 GO:0000287 ... P00817 N/A
    32071 1m38:A (1.8) BS02 CO 3.6.1.1 GO:0000287 ... P00817 N/A
    32072 1m38:B (1.8) BS01 CO 3.6.1.1 GO:0000287 ... P00817 N/A
    32073 1m3h:A (2.05) BS01 dna 3.2.2.-
    4.2.99.18
    GO:0000978 ... O15527 15610848
    32074 1m3h:A (2.05) BS02 dna 3.2.2.-
    4.2.99.18
    GO:0000978 ... O15527 15610848
    32075 1m3h:A (2.05) BS03 dna 3.2.2.-
    4.2.99.18
    GO:0000978 ... O15527 15610848
    32076 1m3q:A (1.9) BS01 dna 3.2.2.-
    4.2.99.18
    GO:0000978 ... O15527 15610848
    32077 1m3q:A (1.9) BS02 dna 3.2.2.-
    4.2.99.18
    GO:0000978 ... O15527 15610848
    32078 1m3q:A (1.9) BS03 ANG 3.2.2.-
    4.2.99.18
    GO:0000978 ... O15527 15610848
    32079 1m3u:A (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32080 1m3u:A (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32081 1m3u:B (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32082 1m3u:B (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32083 1m3u:C (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32084 1m3u:C (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32085 1m3u:D (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32086 1m3u:D (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32087 1m3u:E (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32088 1m3u:E (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32089 1m3u:F (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32090 1m3u:F (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32091 1m3u:G (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32092 1m3u:G (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32093 1m3u:H (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32094 1m3u:H (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32095 1m3u:I (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32096 1m3u:I (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32097 1m3u:J (1.8) BS01 MG 2.1.2.11 GO:0000287 ... P31057 12906829
    32098 1m3u:J (1.8) BS02 KPL 2.1.2.11 GO:0000287 ... P31057 12906829
    32099 1m3v:A (-1.00) BS01 ZN ? N/A P70662 12727888
    32100 1m3v:A (-1.00) BS02 ZN ? N/A P70662 12727888
    32101 1m3x:L (2.55) BS01 BCL ? GO:0009772 ... P0C0Y8 12167672
    32102 1m3x:L (2.55) BS02 BCL ? GO:0009772 ... P0C0Y8 12167672
    32103 1m3x:L (2.55) BS03 BCL ? GO:0009772 ... P0C0Y8 12167672
    32104 1m3x:L (2.55) BS04 BPH ? GO:0009772 ... P0C0Y8 12167672
    32105 1m3x:L (2.55) BS05 U10 ? GO:0009772 ... P0C0Y8 12167672
    32106 1m3x:L (2.55) BS06 FE ? GO:0009772 ... P0C0Y8 12167672
    32107 1m3x:M (2.55) BS01 BCL ? GO:0009772 ... P0C0Y9 12167672
    32108 1m3x:M (2.55) BS02 BCL ? GO:0009772 ... P0C0Y9 12167672
    32109 1m3x:M (2.55) BS03 BPH ? GO:0009772 ... P0C0Y9 12167672
    32110 1m3x:M (2.55) BS04 FE ? GO:0009772 ... P0C0Y9 12167672
    32111 1m3x:M (2.55) BS05 BCL ? GO:0009772 ... P0C0Y9 12167672
    32112 1m3x:M (2.55) BS06 BPH ? GO:0009772 ... P0C0Y9 12167672
    32113 1m3x:M (2.55) BS07 U10 ? GO:0009772 ... P0C0Y9 12167672
    32114 1m3x:M (2.55) BS08 SPO ? GO:0009772 ... P0C0Y9 12167672
    32115 1m3x:M (2.55) BS09 CDL ? GO:0009772 ... P0C0Y9 12167672
    32116 1m3z:A (1.87) BS01 ACO 2.3.1.9 GO:0003985 ... P07097 12501183
    32117 1m3z:B (1.87) BS01 ACO 2.3.1.9 GO:0003985 ... P07097 12501183
    32118 1m3z:C (1.87) BS01 ACO 2.3.1.9 GO:0003985 ... P07097 12501183
    32119 1m3z:D (1.87) BS01 ACO 2.3.1.9 GO:0003985 ... P07097 12501183
    32120 1m40:A (0.85) BS01 CB4 3.5.2.6 GO:0005515 ... P62593 11996574
    32121 1m43:A (2.4) BS01 peptide 3.4.23.39 GO:0004190 ... P46925 N/A
    32122 1m43:B (2.4) BS01 peptide 3.4.23.39 GO:0004190 ... P46925 N/A
    32123 1m45:A (1.65) BS01 peptide ? GO:0000142 ... P53141 12554638
    32124 1m46:A (2.103) BS01 peptide ? GO:0000142 ... P53141 12554638
    32125 1m48:A (1.95) BS01 FRG ? GO:0002366 ... P60568 12582206 MOAD: Kd=8.2uM
    32126 1m48:B (1.95) BS01 FRG ? GO:0002366 ... P60568 12582206 MOAD: Kd=8.2uM
    32127 1m49:A (2.0) BS01 CMM ? GO:0002366 ... P60568 12582206
    32128 1m49:B (2.0) BS01 CMM ? GO:0002366 ... P60568 12582206
    32129 1m4a:A (2.18) BS01 MPE ? GO:0002366 ... P60568 12582206
    32130 1m4b:A (2.15) BS01 NMP ? GO:0002366 ... P60568 12582206
    32131 1m4d:A (1.8) BS01 TOY 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32132 1m4d:A (1.8) BS02 COA 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32133 1m4d:A (1.8) BS03 PAP 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32134 1m4d:B (1.8) BS01 TOY 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32135 1m4d:B (1.8) BS02 COA 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32136 1m4g:A (1.8) BS01 COA 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32137 1m4g:A (1.8) BS02 RIO 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32138 1m4g:B (1.8) BS01 COA 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32139 1m4g:B (1.8) BS02 RIO 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32140 1m4g:B (1.8) BS03 PAP 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32141 1m4h:A (2.1) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 12206667
    32142 1m4h:B (2.1) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 12206667
    32143 1m4i:A (1.5) BS01 COA 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32144 1m4i:A (1.5) BS02 KAN 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32145 1m4i:A (1.5) BS03 PAP 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32146 1m4i:B (1.5) BS01 COA 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32147 1m4i:B (1.5) BS02 KAN 2.3.1.- GO:0005886 ... P9WQG9 12161746
    32148 1m4l:A (1.25) BS01 ZN 3.4.17.1 GO:0004181 ... P00730 12554943
    32149 1m4m:A (2.8) BS01 ZN ? GO:0000086 ... O70201 10949038
    32150 1m4m:A (2.8) BS02 ZN ? GO:0000086 ... O70201 10949038
    32151 1m4n:A (2.01) BS01 PLP 1.4.-.-
    4.4.1.14
    GO:0003824 ... P37821 12686108
    32152 1m4n:A (2.01) BS02 AAD 1.4.-.-
    4.4.1.14
    GO:0003824 ... P37821 12686108
    32153 1m4p:A (-1.00) BS01 peptide ? GO:0015031 ... Q99816 12379843
    32154 1m4q:A (-1.00) BS01 peptide ? GO:0015031 ... Q99816 12379843
    32155 1m51:A (2.25) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P35558 14552798
    32156 1m51:A (2.25) BS02 TSX 2.7.11.-
    4.1.1.32
    GO:0000287 ... P35558 14552798 MOAD: ic50=18.8uM
    32157 1m52:A (2.6) BS01 P17 2.7.10.2 GO:0004672 ... P00520 12154025
    32158 1m52:B (2.6) BS01 P17 2.7.10.2 GO:0004672 ... P00520 12154025
    32159 1m54:A (2.9) BS01 PLP 4.2.1.22 GO:0004122 ... P35520 12173932
    32160 1m54:A (2.9) BS02 HEM 4.2.1.22 GO:0004122 ... P35520 12173932
    32161 1m54:B (2.9) BS01 PLP 4.2.1.22 GO:0004122 ... P35520 12173932
    32162 1m54:B (2.9) BS02 HEM 4.2.1.22 GO:0004122 ... P35520 12173932
    32163 1m54:C (2.9) BS01 PLP 4.2.1.22 GO:0004122 ... P35520 12173932
    32164 1m54:C (2.9) BS02 HEM 4.2.1.22 GO:0004122 ... P35520 12173932
    32165 1m54:D (2.9) BS01 PLP 4.2.1.22 GO:0004122 ... P35520 12173932
    32166 1m54:D (2.9) BS02 HEM 4.2.1.22 GO:0004122 ... P35520 12173932
    32167 1m54:E (2.9) BS01 PLP 4.2.1.22 GO:0004122 ... P35520 12173932
    32168 1m54:E (2.9) BS02 HEM 4.2.1.22 GO:0004122 ... P35520 12173932
    32169 1m54:F (2.9) BS01 PLP 4.2.1.22 GO:0004122 ... P35520 12173932
    32170 1m54:F (2.9) BS02 HEM 4.2.1.22 GO:0004122 ... P35520 12173932
    32171 1m55:A (1.4) BS01 ZN ? N/A Q9YJC1 12191478
    32172 1m55:A (1.4) BS02 ZN ? N/A Q9YJC1 12191478
    32173 1m55:B (1.4) BS01 ZN ? N/A Q9YJC1 12191478
    32174 1m55:B (1.4) BS02 ZN ? N/A Q9YJC1 12191478
    32175 1m56:A (2.3) BS01 CU 7.1.1.9 GO:0004129 ... P33517 12144789
    32176 1m56:A (2.3) BS02 MG 7.1.1.9 GO:0004129 ... P33517 12144789
    32177 1m56:A (2.3) BS03 CA 7.1.1.9 GO:0004129 ... P33517 12144789
    32178 1m56:A (2.3) BS04 HEA 7.1.1.9 GO:0004129 ... P33517 12144789
    32179 1m56:A (2.3) BS05 HEA 7.1.1.9 GO:0004129 ... P33517 12144789
    32180 1m56:B (2.3) BS01 CU 7.1.1.9 GO:0004129 ... Q03736 12144789
    32181 1m56:B (2.3) BS02 CU 7.1.1.9 GO:0004129 ... Q03736 12144789
    32182 1m56:G (2.3) BS01 CU 7.1.1.9 GO:0004129 ... P33517 12144789
    32183 1m56:G (2.3) BS02 MG 7.1.1.9 GO:0004129 ... P33517 12144789
    32184 1m56:G (2.3) BS03 CA 7.1.1.9 GO:0004129 ... P33517 12144789
    32185 1m56:G (2.3) BS04 HEA 7.1.1.9 GO:0004129 ... P33517 12144789
    32186 1m56:G (2.3) BS05 HEA 7.1.1.9 GO:0004129 ... P33517 12144789
    32187 1m56:H (2.3) BS01 CU 7.1.1.9 GO:0004129 ... Q03736 12144789
    32188 1m56:H (2.3) BS02 CU 7.1.1.9 GO:0004129 ... Q03736 12144789
    32189 1m57:A (3.0) BS01 CU 7.1.1.9 GO:0004129 ... P33517 12144789
    32190 1m57:A (3.0) BS02 MG 7.1.1.9 GO:0004129 ... P33517 12144789
    32191 1m57:A (3.0) BS03 CA 7.1.1.9 GO:0004129 ... P33517 12144789
    32192 1m57:A (3.0) BS04 HEA 7.1.1.9 GO:0004129 ... P33517 12144789
    32193 1m57:A (3.0) BS05 HEA 7.1.1.9 GO:0004129 ... P33517 12144789
    32194 1m57:B (3.0) BS01 CU 7.1.1.9 GO:0004129 ... Q03736 12144789
    32195 1m57:B (3.0) BS02 CU 7.1.1.9 GO:0004129 ... Q03736 12144789
    32196 1m57:G (3.0) BS01 CU 7.1.1.9 GO:0004129 ... P33517 12144789
    32197 1m57:G (3.0) BS02 MG 7.1.1.9 GO:0004129 ... P33517 12144789
    32198 1m57:G (3.0) BS03 CA 7.1.1.9 GO:0004129 ... P33517 12144789
    32199 1m57:G (3.0) BS04 HEA 7.1.1.9 GO:0004129 ... P33517 12144789
    32200 1m57:G (3.0) BS05 HEA 7.1.1.9 GO:0004129 ... P33517 12144789

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).