SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    322001 5adv:B (2.1) BS03 DBS ? GO:0006826 ... Q0P8Q4 27162326
    322002 5adv:C (2.1) BS01 FE ? GO:0006826 ... Q0P8Q4 27162326
    322003 5adv:C (2.1) BS02 DBS ? GO:0006826 ... Q0P8Q4 27162326
    322004 5adv:C (2.1) BS03 DBS ? GO:0006826 ... Q0P8Q4 27162326
    322005 5adw:A (1.9) BS01 FE ? GO:0006826 ... Q0P8Q4 27162326
    322006 5adw:A (1.9) BS02 EHS ? GO:0006826 ... Q0P8Q4 27162326 MOAD: Kd=10.1nM
    322007 5adw:B (1.9) BS01 FE ? GO:0006826 ... Q0P8Q4 27162326
    322008 5adw:B (1.9) BS02 EHS ? GO:0006826 ... Q0P8Q4 27162326 MOAD: Kd=10.1nM
    322009 5adw:C (1.9) BS01 FE ? GO:0006826 ... Q0P8Q4 27162326
    322010 5adx:F (4.0) BS01 peptide ? N/A F2Z5G5 25814576
    322011 5ady:0 (4.5) BS01 rna ? GO:0000027 ... P0A7N4 26458047
    322012 5ady:1 (4.5) BS01 rna ? GO:0000027 ... P0A7N9 26458047
    322013 5ady:2 (4.5) BS01 rna ? GO:0002181 ... P0A7P5 26458047
    322014 5ady:3 (4.5) BS01 rna ? GO:0002181 ... P0A7Q1 26458047
    322015 5ady:4 (4.5) BS01 rna ? GO:0002181 ... P0A7Q6 26458047
    322016 5ady:5 (4.5) BS01 rna ? GO:0000027 ... P0A7L0 26458047
    322017 5ady:6 (4.5) BS01 rna ? GO:0003924 ... P25519 26458047
    322018 5ady:6 (4.5) BS02 GNP ? GO:0003924 ... P25519 26458047
    322019 5ady:6 (4.5) BS03 MG ? GO:0003924 ... P25519 26458047
    322020 5ady:7 (4.5) BS01 rna ? GO:0002181 ... P0A7J3 26458047
    322021 5ady:C (4.5) BS01 rna ? GO:0000027 ... P60422 26458047
    322022 5ady:D (4.5) BS01 rna ? GO:0000027 ... P60438 26458047
    322023 5ady:E (4.5) BS01 rna ? GO:0001070 ... P60723 26458047
    322024 5ady:F (4.5) BS01 rna ? GO:0000027 ... P62399 26458047
    322025 5ady:F (4.5) BS02 rna ? GO:0000027 ... P62399 26458047
    322026 5ady:G (4.5) BS01 rna ? GO:0000027 ... P0AG55 26458047
    322027 5ady:H (4.5) BS01 rna ? GO:0002181 ... P0A7R1 26458047
    322028 5ady:I (4.5) BS01 rna ? GO:0000027 ... P0A7J7 26458047
    322029 5ady:J (4.5) BS01 rna ? GO:0002181 ... P0AA10 26458047
    322030 5ady:K (4.5) BS01 rna ? GO:0002181 ... P0ADY3 26458047
    322031 5ady:L (4.5) BS01 rna ? GO:0002181 ... P02413 26458047
    322032 5ady:M (4.5) BS01 rna ? GO:0000027 ... P0ADY7 26458047
    322033 5ady:M (4.5) BS02 rna ? GO:0000027 ... P0ADY7 26458047
    322034 5ady:N (4.5) BS01 rna ? GO:0000027 ... P0AG44 26458047
    322035 5ady:O (4.5) BS01 rna ? GO:0002181 ... P0C018 26458047
    322036 5ady:O (4.5) BS02 rna ? GO:0002181 ... P0C018 26458047
    322037 5ady:P (4.5) BS01 rna ? GO:0000027 ... P0A7K6 26458047
    322038 5ady:Q (4.5) BS01 rna ? GO:0000027 ... P0A7L3 26458047
    322039 5ady:R (4.5) BS01 rna ? GO:0002181 ... P0AG48 26458047
    322040 5ady:S (4.5) BS01 rna ? GO:0002181 ... P61175 26458047
    322041 5ady:T (4.5) BS01 rna ? GO:0000027 ... P0ADZ0 26458047
    322042 5ady:U (4.5) BS01 rna ? GO:0000027 ... P60624 26458047
    322043 5ady:V (4.5) BS01 rna ? GO:0000027 ... P68919 26458047
    322044 5ady:W (4.5) BS01 rna ? GO:0000027 ... P0A7L8 26458047
    322045 5ady:X (4.5) BS01 rna ? GO:0000027 ... P0A7M2 26458047
    322046 5ady:Y (4.5) BS01 rna ? GO:0000027 ... P0A7M6 26458047
    322047 5ady:Z (4.5) BS01 rna ? GO:0000027 ... P0AG51 26458047
    322048 5ady:Z (4.5) BS02 rna ? GO:0000027 ... P0AG51 26458047
    322049 5adz:A (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322050 5adz:A (2.2) BS02 KQS 2.5.1.26 GO:0003824 ... P97275 26322624
    322051 5adz:B (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322052 5adz:B (2.2) BS02 KQS 2.5.1.26 GO:0003824 ... P97275 26322624
    322053 5adz:C (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322054 5adz:C (2.2) BS02 KQS 2.5.1.26 GO:0003824 ... P97275 26322624
    322055 5adz:D (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322056 5adz:D (2.2) BS02 KQS 2.5.1.26 GO:0003824 ... P97275 26322624
    322057 5ae1:A (2.1) BS01 B2Z 2.5.1.26 GO:0003824 ... P97275 26322624
    322058 5ae1:A (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322059 5ae1:B (2.1) BS01 B2Z 2.5.1.26 GO:0003824 ... P97275 26322624
    322060 5ae1:B (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322061 5ae1:C (2.1) BS01 B2Z 2.5.1.26 GO:0003824 ... P97275 26322624
    322062 5ae1:C (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322063 5ae1:D (2.1) BS01 B2Z 2.5.1.26 GO:0003824 ... P97275 26322624
    322064 5ae1:D (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322065 5ae2:A (2.0) BS01 FYC 2.5.1.26 GO:0003824 ... P97275 26322624
    322066 5ae2:A (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322067 5ae2:B (2.0) BS01 FYC 2.5.1.26 GO:0003824 ... P97275 26322624
    322068 5ae2:B (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322069 5ae2:C (2.0) BS01 FYC 2.5.1.26 GO:0003824 ... P97275 26322624
    322070 5ae2:C (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322071 5ae2:D (2.0) BS01 FYC 2.5.1.26 GO:0003824 ... P97275 26322624
    322072 5ae2:D (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322073 5ae3:A (2.18) BS01 AWB 2.5.1.26 GO:0003824 ... P97275 26322624
    322074 5ae3:A (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322075 5ae3:B (2.18) BS01 AWB 2.5.1.26 GO:0003824 ... P97275 26322624
    322076 5ae3:B (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322077 5ae3:C (2.18) BS01 AWB 2.5.1.26 GO:0003824 ... P97275 26322624
    322078 5ae3:C (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322079 5ae3:D (2.18) BS01 AWB 2.5.1.26 GO:0003824 ... P97275 26322624
    322080 5ae3:D (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    322081 5ae6:A (2.1) BS01 MAN 3.2.1.37 GO:0004553 ... Q92458 N/A
    322082 5ae6:A (2.1) BS02 TXB 3.2.1.37 GO:0004553 ... Q92458 N/A
    322083 5ae6:A (2.1) BS03 XYP 3.2.1.37 GO:0004553 ... Q92458 N/A
    322084 5ae6:A (2.1) BS04 ZN 3.2.1.37 GO:0004553 ... Q92458 N/A
    322085 5ae6:A (2.1) BS05 ZN 3.2.1.37 GO:0004553 ... Q92458 N/A
    322086 5ae6:B (2.1) BS01 TXB 3.2.1.37 GO:0004553 ... Q92458 N/A
    322087 5ae6:B (2.1) BS02 XYP 3.2.1.37 GO:0004553 ... Q92458 N/A
    322088 5ae6:B (2.1) BS03 ZN 3.2.1.37 GO:0004553 ... Q92458 N/A
    322089 5ae6:B (2.1) BS04 ZN 3.2.1.37 GO:0004553 ... Q92458 N/A
    322090 5ae6:B (2.1) BS05 ZN 3.2.1.37 GO:0004553 ... Q92458 N/A
    322091 5ae8:A (2.42) BS01 VVX 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 26301626 MOAD: Ki=0.126nM
    322092 5ae9:A (2.44) BS01 OKO 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 26301626 MOAD: Ki=0.0794nM
    322093 5aeb:A (2.1) BS01 ZN 3.5.2.6 GO:0046872 ... B5L5V5 28750094
    322094 5aeb:A (2.1) BS02 ZN 3.5.2.6 GO:0046872 ... B5L5V5 28750094
    322095 5aeb:A (2.1) BS03 CO 3.5.2.6 GO:0046872 ... B5L5V5 28750094
    322096 5aeb:B (2.1) BS01 CO 3.5.2.6 GO:0046872 ... B5L5V5 28750094
    322097 5aeb:B (2.1) BS02 ZN 3.5.2.6 GO:0046872 ... B5L5V5 28750094
    322098 5aeb:B (2.1) BS03 ZN 3.5.2.6 GO:0046872 ... B5L5V5 28750094
    322099 5aec:A (1.93) BS01 PIN 1.14.14.155 GO:0004497 ... D7UER1 26527149
    322100 5aec:B (1.93) BS01 PIN 1.14.14.155 GO:0004497 ... D7UER1 26527149
    322101 5aed:A (1.91) BS01 CA 3.2.1.199 GO:0003824 ... P32138 26878550
    322102 5aed:B (1.91) BS01 CA 3.2.1.199 GO:0003824 ... P32138 26878550
    322103 5aee:A (1.85) BS01 CA 3.2.1.199 GO:0003824 ... P32138 26878550
    322104 5aee:A (1.85) BS02 CA 3.2.1.199 GO:0003824 ... P32138 26878550
    322105 5aee:A (1.85) BS03 NSQ 3.2.1.199 GO:0003824 ... P32138 26878550
    322106 5aee:B (1.85) BS01 CA 3.2.1.199 GO:0003824 ... P32138 26878550
    322107 5aee:B (1.85) BS02 NSQ 3.2.1.199 GO:0003824 ... P32138 26878550
    322108 5aeg:A (1.85) BS01 CA 3.2.1.199 GO:0003824 ... P32138 26878550
    322109 5aeg:B (1.85) BS01 CA 3.2.1.199 GO:0003824 ... P32138 26878550
    322110 5aeg:B (1.85) BS02 B9D 3.2.1.199 GO:0003824 ... P32138 26878550
    322111 5aeh:A (1.85) BS01 8IR 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26706174 MOAD: ic50=0.037uM
    BindingDB: IC50=37nM
    322112 5aeh:A (1.85) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26706174
    322113 5aeh:B (1.85) BS01 8IR 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26706174 MOAD: ic50=0.037uM
    BindingDB: IC50=37nM
    322114 5aeh:B (1.85) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26706174
    322115 5aei:A (1.83) BS01 peptide N/A N/A N/A 26878586
    322116 5aei:A (1.83) BS02 CA N/A N/A N/A 26878586
    322117 5aei:A (1.83) BS03 CA N/A N/A N/A 26878586
    322118 5aei:A (1.83) BS04 CA N/A N/A N/A 26878586
    322119 5aei:B (1.83) BS01 peptide N/A N/A N/A 26878586
    322120 5aei:B (1.83) BS02 CA N/A N/A N/A 26878586
    322121 5aei:B (1.83) BS03 CA N/A N/A N/A 26878586
    322122 5aei:B (1.83) BS04 CA N/A N/A N/A 26878586
    322123 5aei:B (1.83) BS05 CA N/A N/A N/A 26878586
    322124 5aei:B (1.83) BS06 CA N/A N/A N/A 26878586
    322125 5aei:B (1.83) BS07 CA N/A N/A N/A 26878586
    322126 5aei:B (1.83) BS08 CA N/A N/A N/A 26878586
    322127 5aei:C (1.83) BS01 peptide N/A N/A N/A 26878586
    322128 5aei:C (1.83) BS02 CA N/A N/A N/A 26878586
    322129 5aei:C (1.83) BS03 CA N/A N/A N/A 26878586
    322130 5aei:C (1.83) BS04 CA N/A N/A N/A 26878586
    322131 5aei:C (1.83) BS05 CA N/A N/A N/A 26878586
    322132 5aei:C (1.83) BS06 CA N/A N/A N/A 26878586
    322133 5aei:C (1.83) BS07 CA N/A N/A N/A 26878586
    322134 5ael:A (2.6) BS01 QAF 2.5.1.10 GO:0004161 ... Q86C09 26392508
    322135 5ael:A (2.6) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 26392508
    322136 5ael:A (2.6) BS03 MG 2.5.1.10 GO:0004161 ... Q86C09 26392508
    322137 5ael:B (2.6) BS01 QAF 2.5.1.10 GO:0004161 ... Q86C09 26392508
    322138 5ael:B (2.6) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 26392508
    322139 5ael:B (2.6) BS03 MG 2.5.1.10 GO:0004161 ... Q86C09 26392508
    322140 5aen:A (1.864) BS01 DP8 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 25625859 MOAD: ic50=0.06uM
    BindingDB: Kd=270nM, IC50=60nM, Ki=160nM
    322141 5aen:A (1.864) BS02 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 25625859
    322142 5aep:A (1.95) BS01 QUP 2.7.10.2 GO:0004672 ... O60674 25882525 MOAD: ic50=0.068uM
    BindingDB: IC50=68nM
    322143 5aeq:A (1.95) BS01 CA ? GO:0000287 ... P62168 25979333
    322144 5aeq:A (1.95) BS02 CA ? GO:0000287 ... P62168 25979333
    322145 5aeq:A (1.95) BS03 CA ? GO:0000287 ... P62168 25979333
    322146 5aeq:B (1.95) BS01 CA ? GO:0000287 ... P62168 25979333
    322147 5aeq:B (1.95) BS02 CA ? GO:0000287 ... P62168 25979333
    322148 5aeq:B (1.95) BS03 CA ? GO:0000287 ... P62168 25979333
    322149 5aer:A (2.19) BS01 peptide ? GO:0000287 ... P62168 25979333
    322150 5aer:A (2.19) BS02 peptide ? GO:0000287 ... P62168 25979333
    322151 5aer:A (2.19) BS03 CA ? GO:0000287 ... P62168 25979333
    322152 5aer:A (2.19) BS04 CA ? GO:0000287 ... P62168 25979333
    322153 5aer:A (2.19) BS05 CA ? GO:0000287 ... P62168 25979333
    322154 5aes:A (2.751) BS01 MG 3.1.3.16
    3.1.3.74
    GO:0000287 ... P60487 25783190
    322155 5aes:A (2.751) BS02 5B0 3.1.3.16
    3.1.3.74
    GO:0000287 ... P60487 25783190 BindingDB: IC50=1300000nM
    322156 5aes:B (2.751) BS01 MG 3.1.3.16
    3.1.3.74
    GO:0000287 ... P60487 25783190
    322157 5aes:B (2.751) BS02 5B0 3.1.3.16
    3.1.3.74
    GO:0000287 ... P60487 25783190 BindingDB: IC50=1300000nM
    322158 5aeu:A (2.49) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322159 5aeu:A (2.49) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322160 5aeu:C (2.49) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322161 5aeu:C (2.49) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322162 5aeu:E (2.49) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322163 5aeu:E (2.49) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322164 5aeu:G (2.49) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322165 5aeu:G (2.49) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322166 5aew:A (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322167 5aew:A (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322168 5aew:C (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322169 5aew:C (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322170 5aew:C (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322171 5aew:E (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322172 5aew:E (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322173 5aew:E (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322174 5aew:G (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322175 5aew:G (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322176 5aew:I (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322177 5aew:I (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322178 5aew:I (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322179 5aew:K (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322180 5aew:K (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322181 5aew:K (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322182 5aew:M (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322183 5aew:M (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322184 5aew:M (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322185 5aew:O (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322186 5aew:O (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322187 5aew:O (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322188 5aew:Q (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322189 5aew:Q (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322190 5aew:Q (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322191 5aew:S (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322192 5aew:S (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322193 5aew:S (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322194 5aew:U (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322195 5aew:U (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322196 5aew:W (1.88) BS01 FES 1.14.12.18 GO:0005506 ... P37333 26953337
    322197 5aew:W (1.88) BS02 FE2 1.14.12.18 GO:0005506 ... P37333 26953337
    322198 5aew:W (1.88) BS03 BNL 1.14.12.18 GO:0005506 ... P37333 26953337
    322199 5aey:A (4.3) BS01 ANP ? GO:0030541 ... P11904 25915019
    322200 5aey:B (4.3) BS01 ANP ? GO:0030541 ... P11904 25915019

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).