SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    324401 5ayy:C (3.09) BS01 NTM 2.4.2.19 GO:0004514 ... Q15274 26805589
    324402 5ayy:D (3.09) BS01 NTM 2.4.2.19 GO:0004514 ... Q15274 26805589
    324403 5ayy:E (3.09) BS01 NTM 2.4.2.19 GO:0004514 ... Q15274 26805589
    324404 5ayy:F (3.09) BS01 NTM 2.4.2.19 GO:0004514 ... Q15274 26805589
    324405 5ayy:G (3.09) BS01 NTM 2.4.2.19 GO:0004514 ... Q15274 26805589
    324406 5ayy:H (3.09) BS01 NTM 2.4.2.19 GO:0004514 ... Q15274 26805589
    324407 5ayy:I (3.09) BS01 NTM 2.4.2.19 GO:0004514 ... Q15274 26805589
    324408 5ayz:A (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324409 5ayz:B (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324410 5ayz:C (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324411 5ayz:D (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324412 5ayz:E (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324413 5ayz:F (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324414 5ayz:G (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324415 5ayz:H (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324416 5ayz:I (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324417 5ayz:J (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324418 5ayz:K (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324419 5ayz:L (2.6) BS01 NCN 2.4.2.19 GO:0004514 ... Q15274 26805589
    324420 5az0:A (2.2) BS01 CA N/A GO:0016491 ... N/A 27103441
    324421 5az1:A (2.3) BS01 CA N/A GO:0016491 ... N/A 27103441
    324422 5az1:A (2.3) BS02 NDP N/A GO:0016491 ... N/A 27103441
    324423 5az3:A (1.423) BS01 HEM ? N/A Q8NTB8 N/A
    324424 5az5:A (2.4) BS01 MAN ? GO:0002224 ... Q9NR97 N/A
    324425 5az5:A (2.4) BS02 MBL ? GO:0002224 ... Q9NR97 N/A
    324426 5az5:A (2.4) BS03 MBL ? GO:0002224 ... Q9NR97 N/A
    324427 5az5:B (2.4) BS01 MAN ? GO:0002224 ... Q9NR97 N/A
    324428 5az5:B (2.4) BS02 MBL ? GO:0002224 ... Q9NR97 N/A
    324429 5az5:B (2.4) BS03 MBL ? GO:0002224 ... Q9NR97 N/A
    324430 5az5:C (2.4) BS01 MBL ? GO:0002224 ... Q9NR97 N/A
    324431 5az5:C (2.4) BS02 MBL ? GO:0002224 ... Q9NR97 N/A
    324432 5az5:D (2.4) BS01 MBL ? GO:0002224 ... Q9NR97 N/A
    324433 5az5:D (2.4) BS02 MBL ? GO:0002224 ... Q9NR97 N/A
    324434 5az6:A (2.56) BS01 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324435 5az6:A (2.56) BS02 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324436 5az6:B (2.56) BS01 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324437 5az6:B (2.56) BS02 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324438 5az7:A (1.96) BS01 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324439 5az7:A (1.96) BS02 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324440 5az8:A (1.7) BS01 peptide ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324441 5az8:A (1.7) BS02 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324442 5az8:A (1.7) BS03 GLC ? GO:0005515 ... P0AEX9
    Q62760
    26694222
    324443 5aza:A (2.08) BS01 GLC ?
    2.4.99.21
    GO:0005515 ... I6V0B8
    P0AEX9
    26694222
    324444 5aza:A (2.08) BS02 GLC ?
    2.4.99.21
    GO:0005515 ... I6V0B8
    P0AEX9
    26694222
    324445 5aza:A (2.08) BS03 CA ?
    2.4.99.21
    GO:0005515 ... I6V0B8
    P0AEX9
    26694222
    324446 5azb:A (1.6) BS01 PLM 2.5.1.145 GO:0005886 ... P60955 26729647
    324447 5azb:A (1.6) BS02 PLM 2.5.1.145 GO:0005886 ... P60955 26729647
    324448 5azb:A (1.6) BS03 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324449 5azb:A (1.6) BS04 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324450 5azb:A (1.6) BS05 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324451 5azc:A (1.902) BS01 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324452 5azc:A (1.902) BS02 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324453 5azc:A (1.902) BS03 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324454 5azc:A (1.902) BS04 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324455 5azc:A (1.902) BS05 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324456 5azc:A (1.902) BS06 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324457 5azc:A (1.902) BS07 PGT 2.5.1.145 GO:0005886 ... P60955 26729647
    324458 5aze:H (2.2) BS01 CA N/A N/A N/A 26496237
    324459 5azf:A (1.6) BS01 peptide ? GO:0000045 ... Q09490 26687600
    324460 5azf:B (1.6) BS01 peptide ? GO:0000045 ... Q09490 26687600
    324461 5azg:A (1.81) BS01 peptide ? GO:0000045 ... Q09490 26687600
    324462 5azg:A (1.81) BS02 peptide ? GO:0000045 ... Q09490 26687600
    324463 5azg:B (1.81) BS01 peptide ? GO:0000045 ... Q09490 26687600
    324464 5azi:A (2.45) BS01 4NP 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324465 5azi:A (2.45) BS02 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324466 5azi:B (2.45) BS01 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324467 5azi:C (2.45) BS01 4NP 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324468 5azi:C (2.45) BS02 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324469 5azi:D (2.45) BS01 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324470 5azj:A (2.61) BS01 4NP 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324471 5azj:A (2.61) BS02 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324472 5azj:B (2.61) BS01 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324473 5azj:C (2.61) BS01 4NP 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324474 5azj:C (2.61) BS02 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324475 5azj:D (2.61) BS01 GOL 2.7.1.30 GO:0004370 ... D3KVM3 28778484
    324476 5azp:A (1.69) BS01 OYA ? GO:0009279 ... Q9I0Y7 26914226
    324477 5azp:C (1.69) BS01 3PK ? GO:0009279 ... Q9I0Y7 26914226
    324478 5azq:A (1.4) BS01 J1R 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26760442
    324479 5azq:A (1.4) BS02 J1S 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26760442
    324480 5azq:A (1.4) BS03 CYN 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26760442
    324481 5azr:A (1.2) BS01 J1R 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26760442
    324482 5azr:A (1.2) BS02 J1S 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26760442
    324483 5azt:A (3.45) BS01 peptide ? GO:0003677 ... Q07869 27337155
    324484 5azt:A (3.45) BS02 4M5 ? GO:0003677 ... Q07869 27337155
    324485 5azt:B (3.45) BS01 4M5 ? GO:0003677 ... Q07869 27337155
    324486 5azu:A (1.9) BS01 CU ? GO:0005507 ... P00282 1942029
    324487 5azu:B (1.9) BS01 CU ? GO:0005507 ... P00282 1942029
    324488 5azu:C (1.9) BS01 CU ? GO:0005507 ... P00282 1942029
    324489 5azu:D (1.9) BS01 CU ? GO:0005507 ... P00282 1942029
    324490 5azv:A (2.7) BS01 4M5 ? GO:0003677 ... P37231 27337155
    324491 5azv:B (2.7) BS01 4M5 ? GO:0003677 ... P37231 27337155
    324492 5b00:A (2.95) BS01 GPP ? N/A A0A010 26954060
    324493 5b00:B (2.95) BS01 GPP ? N/A A0A010 26954060
    324494 5b00:C (2.95) BS01 GPP ? N/A A0A010 26954060
    324495 5b03:A (2.6) BS01 GPP ? GO:0003677 ... A0A010
    P39476
    26954060
    324496 5b03:B (2.6) BS01 GPP ? GO:0003677 ... A0A010
    P39476
    26954060
    324497 5b03:C (2.6) BS01 GPP ? GO:0003677 ... A0A010
    P39476
    26954060
    324498 5b03:D (2.6) BS01 GPP ? GO:0003677 ... A0A010
    P39476
    26954060
    324499 5b09:A (1.7) BS01 4MX 4.4.1.26 GO:0005737 ... I6WU39 26783002
    324500 5b0h:A (1.94) BS01 ZN ? GO:0001501 ... O14960 27334921
    324501 5b0h:B (1.94) BS01 ZN ? GO:0001501 ... O14960 27334921
    324502 5b0k:A (2.75) BS01 DMU ? GO:0003677 ... A0A010
    P39476
    26954060
    324503 5b0k:A (2.75) BS02 DMU ? GO:0003677 ... A0A010
    P39476
    26954060
    324504 5b0k:B (2.75) BS01 DMU ? GO:0003677 ... A0A010
    P39476
    26954060
    324505 5b0k:B (2.75) BS02 DMU ? GO:0003677 ... A0A010
    P39476
    26954060
    324506 5b0k:C (2.75) BS01 DMU ? GO:0003677 ... A0A010
    P39476
    26954060
    324507 5b0k:D (2.75) BS01 DMU ? GO:0003677 ... A0A010
    P39476
    26954060
    324508 5b0k:D (2.75) BS02 DMU ? GO:0003677 ... A0A010
    P39476
    26954060
    324509 5b0o:A (3.0) BS01 ADP 7.1.2.2 GO:0005515 ... P26465 26984495
    324510 5b0o:B (3.0) BS01 ADP 7.1.2.2 GO:0005515 ... P26465 26984495
    324511 5b0o:C (3.0) BS01 ADP 7.1.2.2 GO:0005515 ... P26465 26984495
    324512 5b0o:D (3.0) BS01 ADP 7.1.2.2 GO:0005515 ... P26465 26984495
    324513 5b0q:A (2.3) BS01 MAN 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324514 5b0q:B (2.3) BS01 MAN 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324515 5b0r:A (1.8) BS01 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324516 5b0r:A (1.8) BS02 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324517 5b0r:B (1.8) BS01 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324518 5b0r:B (1.8) BS02 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324519 5b0s:A (2.1) BS01 MAN 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324520 5b0s:A (2.1) BS02 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324521 5b0s:A (2.1) BS03 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324522 5b0s:B (2.1) BS01 MAN 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324523 5b0s:B (2.1) BS02 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324524 5b0s:B (2.1) BS03 BMA 2.4.1.339 GO:0016757 ... Q92DF6 26632508
    324525 5b0w:A (1.7) BS01 RET N/A GO:0005216 ... N/A 27352034
    324526 5b0w:A (1.7) BS02 22B N/A GO:0005216 ... N/A 27352034
    324527 5b0w:A (1.7) BS03 ILE N/A GO:0005216 ... N/A 27352034
    324528 5b0w:A (1.7) BS04 RET N/A GO:0005216 ... N/A 27352034
    324529 5b0w:B (1.7) BS01 22B N/A GO:0005216 ... N/A 27352034
    324530 5b0w:B (1.7) BS02 RET N/A GO:0005216 ... N/A 27352034
    324531 5b0w:B (1.7) BS03 RET N/A GO:0005216 ... N/A 27352034
    324532 5b0w:D (1.7) BS01 RET N/A GO:0005216 ... N/A 27352034
    324533 5b0w:D (1.7) BS02 RET N/A GO:0005216 ... N/A 27352034
    324534 5b0w:E (1.7) BS01 RET N/A GO:0005216 ... N/A 27352034
    324535 5b0w:E (1.7) BS02 22B N/A GO:0005216 ... N/A 27352034
    324536 5b0w:E (1.7) BS03 RET N/A GO:0005216 ... N/A 27352034
    324537 5b0w:F (1.7) BS01 22B N/A GO:0005216 ... N/A 27352034
    324538 5b0w:F (1.7) BS02 RET N/A GO:0005216 ... N/A 27352034
    324539 5b0w:F (1.7) BS03 RET N/A GO:0005216 ... N/A 27352034
    324540 5b0w:G (1.7) BS01 RET N/A GO:0005216 ... N/A 27352034
    324541 5b0w:G (1.7) BS02 RET N/A GO:0005216 ... N/A 27352034
    324542 5b0x:A (2.3) BS01 HCK 2.7.11.1 GO:0004672 ... P68400 26850376 MOAD: ic50=0.02uM
    BindingDB: IC50=20nM
    324543 5b0y:A (2.557) BS01 dna ? GO:0000786 ... Q71DI3 26694698
    324544 5b0y:A (2.557) BS02 dna ? GO:0000786 ... Q71DI3 26694698
    324545 5b0y:B (2.557) BS01 dna ? GO:0000781 ... P62805 26694698
    324546 5b0y:B (2.557) BS02 dna ? GO:0000781 ... P62805 26694698
    324547 5b0y:C (2.557) BS01 dna ? GO:0000786 ... P04908 26694698
    324548 5b0y:C (2.557) BS02 dna ? GO:0000786 ... P04908 26694698
    324549 5b0y:D (2.557) BS01 dna ? GO:0000786 ... P06899 26694698
    324550 5b0y:D (2.557) BS02 dna ? GO:0000786 ... P06899 26694698
    324551 5b0y:E (2.557) BS01 dna ? GO:0000786 ... Q71DI3 26694698
    324552 5b0y:E (2.557) BS02 dna ? GO:0000786 ... Q71DI3 26694698
    324553 5b0y:F (2.557) BS01 dna ? GO:0000781 ... P62805 26694698
    324554 5b0y:F (2.557) BS02 dna ? GO:0000781 ... P62805 26694698
    324555 5b0y:G (2.557) BS01 dna ? GO:0000786 ... P04908 26694698
    324556 5b0y:G (2.557) BS02 dna ? GO:0000786 ... P04908 26694698
    324557 5b0y:H (2.557) BS01 dna ? GO:0000786 ... P06899 26694698
    324558 5b0y:H (2.557) BS02 dna ? GO:0000786 ... P06899 26694698
    324559 5b0z:A (1.987) BS01 dna ? GO:0000786 ... Q71DI3 26694698
    324560 5b0z:A (1.987) BS02 dna ? GO:0000786 ... Q71DI3 26694698
    324561 5b0z:B (1.987) BS01 dna ? GO:0000781 ... P62805 26694698
    324562 5b0z:B (1.987) BS02 dna ? GO:0000781 ... P62805 26694698
    324563 5b0z:C (1.987) BS01 dna ? GO:0000786 ... P04908 26694698
    324564 5b0z:C (1.987) BS02 dna ? GO:0000786 ... P04908 26694698
    324565 5b0z:D (1.987) BS01 dna ? GO:0000786 ... P06899 26694698
    324566 5b0z:D (1.987) BS02 dna ? GO:0000786 ... P06899 26694698
    324567 5b0z:E (1.987) BS01 dna ? GO:0000786 ... Q71DI3 26694698
    324568 5b0z:E (1.987) BS02 dna ? GO:0000786 ... Q71DI3 26694698
    324569 5b0z:F (1.987) BS01 dna ? GO:0000781 ... P62805 26694698
    324570 5b0z:F (1.987) BS02 dna ? GO:0000781 ... P62805 26694698
    324571 5b0z:G (1.987) BS01 dna ? GO:0000786 ... P04908 26694698
    324572 5b0z:G (1.987) BS02 dna ? GO:0000786 ... P04908 26694698
    324573 5b0z:H (1.987) BS01 dna ? GO:0000786 ... P06899 26694698
    324574 5b0z:H (1.987) BS02 dna ? GO:0000786 ... P06899 26694698
    324575 5b13:G (2.094) BS01 PUB ? GO:0009507 ... F2ZAL7 N/A
    324576 5b13:H (2.094) BS01 PUB ? GO:0009507 ... F2ZAL7 N/A
    324577 5b13:I (2.094) BS01 PUB ? GO:0009507 ... F2ZAL7 N/A
    324578 5b13:J (2.094) BS01 PUB ? GO:0009507 ... F2ZAL7 N/A
    324579 5b13:K (2.094) BS01 PUB ? GO:0009507 ... F2ZAL7 N/A
    324580 5b13:L (2.094) BS01 PUB ? GO:0009507 ... F2ZAL7 N/A
    324581 5b15:A (1.39) BS01 ZN 3.5.2.6 GO:0046872 ... G5ELM3 N/A
    324582 5b15:A (1.39) BS02 ZN 3.5.2.6 GO:0046872 ... G5ELM3 N/A
    324583 5b15:A (1.39) BS03 DQM 3.5.2.6 GO:0046872 ... G5ELM3 N/A
    324584 5b16:A (3.2) BS01 peptide 3.1.26.3 GO:0003723 ... Q9NRR4 26748718
    324585 5b16:A (3.2) BS02 peptide 3.1.26.3 GO:0003723 ... Q9NRR4 26748718
    324586 5b16:A (3.2) BS03 ZN 3.1.26.3 GO:0003723 ... Q9NRR4 26748718
    324587 5b16:A (3.2) BS04 ZN 3.1.26.3 GO:0003723 ... Q9NRR4 26748718
    324588 5b1a:A (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324589 5b1a:A (1.5) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324590 5b1a:A (1.5) BS03 CU 7.1.1.9 GO:0004129 ... P00396 27605664
    324591 5b1a:A (1.5) BS04 MG 7.1.1.9 GO:0004129 ... P00396 27605664
    324592 5b1a:B (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 27605664
    324593 5b1a:B (1.5) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 27605664
    324594 5b1a:C (1.5) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 27605664
    324595 5b1a:F (1.5) BS01 ZN ? GO:0005740 ... P00428 27605664
    324596 5b1a:J (1.5) BS01 DMU ? GO:0006123 ... P07470 27605664
    324597 5b1a:M (1.5) BS01 DMU ? GO:0006123 ... P10175 27605664
    324598 5b1a:N (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324599 5b1a:N (1.5) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324600 5b1a:N (1.5) BS03 CU 7.1.1.9 GO:0004129 ... P00396 27605664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).