SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    324601 5b1a:N (1.5) BS04 MG 7.1.1.9 GO:0004129 ... P00396 27605664
    324602 5b1a:O (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 27605664
    324603 5b1a:O (1.5) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 27605664
    324604 5b1a:P (1.5) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 27605664
    324605 5b1a:S (1.5) BS01 ZN ? GO:0005740 ... P00428 27605664
    324606 5b1a:W (1.5) BS01 DMU ? GO:0006123 ... P07470 27605664
    324607 5b1a:Z (1.5) BS01 DMU ? GO:0006123 ... P10175 27605664
    324608 5b1b:A (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324609 5b1b:A (1.6) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324610 5b1b:A (1.6) BS03 CU 7.1.1.9 GO:0004129 ... P00396 27605664
    324611 5b1b:A (1.6) BS04 MG 7.1.1.9 GO:0004129 ... P00396 27605664
    324612 5b1b:B (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 27605664
    324613 5b1b:B (1.6) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 27605664
    324614 5b1b:C (1.6) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 27605664
    324615 5b1b:F (1.6) BS01 ZN ? GO:0005740 ... P00428 27605664
    324616 5b1b:J (1.6) BS01 DMU ? GO:0006123 ... P07470 27605664
    324617 5b1b:K (1.6) BS01 DMU ? GO:0006123 ... P13183 27605664
    324618 5b1b:L (1.6) BS01 DMU ? GO:0006123 ... P00430 27605664
    324619 5b1b:M (1.6) BS01 DMU ? GO:0006123 ... P10175 27605664
    324620 5b1b:N (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324621 5b1b:N (1.6) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    324622 5b1b:N (1.6) BS03 CU 7.1.1.9 GO:0004129 ... P00396 27605664
    324623 5b1b:N (1.6) BS04 MG 7.1.1.9 GO:0004129 ... P00396 27605664
    324624 5b1b:O (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 27605664
    324625 5b1b:O (1.6) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 27605664
    324626 5b1b:O (1.6) BS03 DMU 7.1.1.9 GO:0004129 ... P68530 27605664
    324627 5b1b:P (1.6) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 27605664
    324628 5b1b:Q (1.6) BS01 DMU ? GO:0006123 ... P00423 27605664
    324629 5b1b:S (1.6) BS01 ZN ? GO:0005740 ... P00428 27605664
    324630 5b1b:W (1.6) BS01 DMU ? GO:0006123 ... P07470 27605664
    324631 5b1b:W (1.6) BS02 DMU ? GO:0006123 ... P07470 27605664
    324632 5b1b:X (1.6) BS01 DMU ? GO:0006123 ... P13183 27605664
    324633 5b1b:X (1.6) BS02 DMU ? GO:0006123 ... P13183 27605664
    324634 5b1b:Z (1.6) BS01 DMU ? GO:0006123 ... P10175 27605664
    324635 5b1d:A (2.3) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    324636 5b1d:A (2.3) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    324637 5b1e:A (2.3) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    324638 5b1i:A (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324639 5b1i:B (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324640 5b1i:C (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324641 5b1i:D (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324642 5b1i:E (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324643 5b1i:F (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324644 5b1i:G (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324645 5b1i:H (3.3) BS01 AA5 4.2.1.22 GO:0004122 ... F9UT54 28127810
    324646 5b1j:A (3.0) BS01 CU 1.7.2.1 GO:0005507 ... O68601 N/A
    324647 5b1j:A (3.0) BS02 CU 1.7.2.1 GO:0005507 ... O68601 N/A
    324648 5b1j:B (3.0) BS01 CU 1.7.2.1 GO:0005507 ... O68601 N/A
    324649 5b1j:B (3.0) BS02 CU 1.7.2.1 GO:0005507 ... O68601 N/A
    324650 5b1j:C (3.0) BS01 CU ? GO:0005507 ... A7VL37 N/A
    324651 5b1k:A (1.35) BS01 CU 1.7.2.1 GO:0005507 ... O68601 N/A
    324652 5b1k:A (1.35) BS02 CU 1.7.2.1 GO:0005507 ... O68601 N/A
    324653 5b1l:A (2.35) BS01 dna ? GO:0000786 ... P68433 28099840
    324654 5b1l:A (2.35) BS02 dna ? GO:0000786 ... P68433 28099840
    324655 5b1l:B (2.35) BS01 dna ? GO:0000786 ... P62806 28099840
    324656 5b1l:B (2.35) BS02 dna ? GO:0000786 ... P62806 28099840
    324657 5b1l:C (2.35) BS01 dna ? GO:0000786 ... C0HKE1 28099840
    324658 5b1l:C (2.35) BS02 dna ? GO:0000786 ... C0HKE1 28099840
    324659 5b1l:D (2.35) BS01 dna ? GO:0000786 ... Q9D2U9 28099840
    324660 5b1l:D (2.35) BS02 dna ? GO:0000786 ... Q9D2U9 28099840
    324661 5b1l:E (2.35) BS01 dna ? GO:0000786 ... P68433 28099840
    324662 5b1l:E (2.35) BS02 dna ? GO:0000786 ... P68433 28099840
    324663 5b1l:F (2.35) BS01 dna ? GO:0000786 ... P62806 28099840
    324664 5b1l:F (2.35) BS02 dna ? GO:0000786 ... P62806 28099840
    324665 5b1l:G (2.35) BS01 dna ? GO:0000786 ... C0HKE1 28099840
    324666 5b1l:G (2.35) BS02 dna ? GO:0000786 ... C0HKE1 28099840
    324667 5b1l:H (2.35) BS01 dna ? GO:0000786 ... Q9D2U9 28099840
    324668 5b1l:H (2.35) BS02 dna ? GO:0000786 ... Q9D2U9 28099840
    324669 5b1m:A (2.34) BS01 dna ? GO:0000786 ... P68433 28099840
    324670 5b1m:A (2.34) BS02 dna ? GO:0000786 ... P68433 28099840
    324671 5b1m:B (2.34) BS01 dna ? GO:0000786 ... P62806 28099840
    324672 5b1m:B (2.34) BS02 dna ? GO:0000786 ... P62806 28099840
    324673 5b1m:C (2.34) BS01 dna ? GO:0000786 ... C0HKE1 28099840
    324674 5b1m:C (2.34) BS02 dna ? GO:0000786 ... C0HKE1 28099840
    324675 5b1m:D (2.34) BS01 dna ? GO:0000786 ... Q9D2U9 28099840
    324676 5b1m:D (2.34) BS02 dna ? GO:0000786 ... Q9D2U9 28099840
    324677 5b1m:E (2.34) BS01 dna ? GO:0000786 ... P68433 28099840
    324678 5b1m:E (2.34) BS02 dna ? GO:0000786 ... P68433 28099840
    324679 5b1m:F (2.34) BS01 dna ? GO:0000786 ... P62806 28099840
    324680 5b1m:F (2.34) BS02 dna ? GO:0000786 ... P62806 28099840
    324681 5b1m:G (2.34) BS01 dna ? GO:0000786 ... C0HKE1 28099840
    324682 5b1m:G (2.34) BS02 dna ? GO:0000786 ... C0HKE1 28099840
    324683 5b1m:H (2.34) BS01 dna ? GO:0000786 ... Q9D2U9 28099840
    324684 5b1m:H (2.34) BS02 dna ? GO:0000786 ... Q9D2U9 28099840
    324685 5b1s:A (1.58) BS01 S4M 2.5.1.16 GO:0003824 ... Q4DA73 28751689
    324686 5b1s:A (1.58) BS02 BSX 2.5.1.16 GO:0003824 ... Q4DA73 28751689 MOAD: ic50=124uM
    324687 5b1s:B (1.58) BS01 S4M 2.5.1.16 GO:0003824 ... Q4DA73 28751689
    324688 5b1s:B (1.58) BS02 BSX 2.5.1.16 GO:0003824 ... Q4DA73 28751689 MOAD: ic50=124uM
    324689 5b1s:C (1.58) BS01 S4M 2.5.1.16 GO:0003824 ... Q4DA73 28751689
    324690 5b1s:C (1.58) BS02 BSX 2.5.1.16 GO:0003824 ... Q4DA73 28751689 MOAD: ic50=124uM
    324691 5b1s:D (1.58) BS01 S4M 2.5.1.16 GO:0003824 ... Q4DA73 28751689
    324692 5b1s:D (1.58) BS02 BSX 2.5.1.16 GO:0003824 ... Q4DA73 28751689 MOAD: ic50=124uM
    324693 5b1u:A (1.57) BS01 ZN 3.5.2.6 GO:0046872 ... G5ELM3 N/A
    324694 5b1u:A (1.57) BS02 ZN 3.5.2.6 GO:0046872 ... G5ELM3 N/A
    324695 5b1u:A (1.57) BS03 HIW 3.5.2.6 GO:0046872 ... G5ELM3 N/A
    324696 5b1w:A (3.05) BS01 CA ? N/A Q9UMR7 27015765
    324697 5b1w:A (3.05) BS02 CA ? N/A Q9UMR7 27015765
    324698 5b1w:B (3.05) BS01 CA ? N/A Q9UMR7 27015765
    324699 5b1w:B (3.05) BS02 CA ? N/A Q9UMR7 27015765
    324700 5b1w:C (3.05) BS01 CA ? N/A Q9UMR7 27015765
    324701 5b1w:C (3.05) BS02 CA ? N/A Q9UMR7 27015765
    324702 5b1w:D (3.05) BS01 CA ? N/A Q9UMR7 27015765
    324703 5b1w:D (3.05) BS02 CA ? N/A Q9UMR7 27015765
    324704 5b1x:A (2.902) BS01 MAN ? N/A Q9UMR7 27015765
    324705 5b1x:A (2.902) BS02 CA ? N/A Q9UMR7 27015765
    324706 5b1x:A (2.902) BS03 CA ? N/A Q9UMR7 27015765
    324707 5b1x:B (2.902) BS01 MAN ? N/A Q9UMR7 27015765
    324708 5b1x:B (2.902) BS02 CA ? N/A Q9UMR7 27015765
    324709 5b1x:B (2.902) BS03 CA ? N/A Q9UMR7 27015765
    324710 5b1x:C (2.902) BS01 MAN ? N/A Q9UMR7 27015765
    324711 5b1x:C (2.902) BS02 CA ? N/A Q9UMR7 27015765
    324712 5b1x:C (2.902) BS03 CA ? N/A Q9UMR7 27015765
    324713 5b1x:D (2.902) BS01 MAN ? N/A Q9UMR7 27015765
    324714 5b1x:D (2.902) BS02 CA ? N/A Q9UMR7 27015765
    324715 5b1x:D (2.902) BS03 CA ? N/A Q9UMR7 27015765
    324716 5b1y:A (2.09) BS01 NDP 1.1.1.100 GO:0000166 ... Q9Y8Y1 27444325
    324717 5b1y:B (2.09) BS01 NDP 1.1.1.100 GO:0000166 ... Q9Y8Y1 27444325
    324718 5b1z:A (2.15) BS01 peptide ? GO:0042981 ... Q07817 N/A
    324719 5b1z:B (2.15) BS01 peptide ? GO:0042981 ... Q07817 N/A
    324720 5b24:A (3.6) BS01 dna ? GO:0000786 ... P68431 26837048
    324721 5b24:A (3.6) BS02 dna ? GO:0000786 ... P68431 26837048
    324722 5b24:B (3.6) BS01 dna ? GO:0000781 ... P62805 26837048
    324723 5b24:B (3.6) BS02 dna ? GO:0000781 ... P62805 26837048
    324724 5b24:C (3.6) BS01 dna ? GO:0000786 ... P04908 26837048
    324725 5b24:C (3.6) BS02 dna ? GO:0000786 ... P04908 26837048
    324726 5b24:D (3.6) BS01 dna ? GO:0000786 ... P06899 26837048
    324727 5b24:D (3.6) BS02 dna ? GO:0000786 ... P06899 26837048
    324728 5b24:E (3.6) BS01 dna ? GO:0000786 ... P68431 26837048
    324729 5b24:E (3.6) BS02 dna ? GO:0000786 ... P68431 26837048
    324730 5b24:F (3.6) BS01 dna ? GO:0000781 ... P62805 26837048
    324731 5b24:F (3.6) BS02 dna ? GO:0000781 ... P62805 26837048
    324732 5b24:G (3.6) BS01 dna ? GO:0000786 ... P04908 26837048
    324733 5b24:G (3.6) BS02 dna ? GO:0000786 ... P04908 26837048
    324734 5b24:H (3.6) BS01 dna ? GO:0000786 ... P06899 26837048
    324735 5b24:H (3.6) BS02 dna ? GO:0000786 ... P06899 26837048
    324736 5b25:A (1.9) BS01 ZN 3.1.4.17 GO:0004114 ... Q01064 26789933
    324737 5b25:A (1.9) BS02 4QJ 3.1.4.17 GO:0004114 ... Q01064 26789933 MOAD: Ki=0.058nM
    BindingDB: IC50=0.058000nM
    324738 5b25:B (1.9) BS01 ZN 3.1.4.17 GO:0004114 ... Q01064 26789933
    324739 5b25:B (1.9) BS02 4QJ 3.1.4.17 GO:0004114 ... Q01064 26789933 MOAD: Ki=0.058nM
    BindingDB: IC50=0.058000nM
    324740 5b25:C (1.9) BS01 ZN 3.1.4.17 GO:0004114 ... Q01064 26789933
    324741 5b25:C (1.9) BS02 4QJ 3.1.4.17 GO:0004114 ... Q01064 26789933 MOAD: Ki=0.058nM
    BindingDB: IC50=0.058000nM
    324742 5b25:D (1.9) BS01 4QJ 3.1.4.17 GO:0004114 ... Q01064 26789933 MOAD: Ki=0.058nM
    BindingDB: IC50=0.058000nM
    324743 5b25:D (1.9) BS02 ZN 3.1.4.17 GO:0004114 ... Q01064 26789933
    324744 5b25:D (1.9) BS03 4QJ 3.1.4.17 GO:0004114 ... Q01064 26789933 MOAD: Ki=0.058nM
    BindingDB: IC50=0.058000nM
    324745 5b2d:A (2.177) BS01 GLC 3.2.1.18 GO:0004308 ... Q9WAF5 27671656
    324746 5b2d:A (2.177) BS02 SIA 3.2.1.18 GO:0004308 ... Q9WAF5 27671656
    324747 5b2d:B (2.177) BS01 GLC 3.2.1.18 GO:0004308 ... Q9WAF5 27671656
    324748 5b2d:B (2.177) BS02 SIA 3.2.1.18 GO:0004308 ... Q9WAF5 27671656
    324749 5b2e:A (1.8) BS01 ZN ? GO:0016811 ... O58235 27456364
    324750 5b2e:A (1.8) BS02 MQG ? GO:0016811 ... O58235 27456364
    324751 5b2e:B (1.8) BS01 ZN ? GO:0016811 ... O58235 27456364
    324752 5b2e:B (1.8) BS02 MQG ? GO:0016811 ... O58235 27456364
    324753 5b2e:C (1.8) BS01 ZN ? GO:0016811 ... O58235 27456364
    324754 5b2e:C (1.8) BS02 MQG ? GO:0016811 ... O58235 27456364
    324755 5b2f:A (1.9) BS01 ZN ? GO:0016811 ... O58235 27456364
    324756 5b2f:A (1.9) BS02 MQG ? GO:0016811 ... O58235 27456364
    324757 5b2f:B (1.9) BS01 ZN ? GO:0016811 ... O58235 27456364
    324758 5b2f:B (1.9) BS02 MQG ? GO:0016811 ... O58235 27456364
    324759 5b2f:C (1.9) BS01 ZN ? GO:0016811 ... O58235 27456364
    324760 5b2f:C (1.9) BS02 MQG ? GO:0016811 ... O58235 27456364
    324761 5b2i:A (3.0) BS01 dna ? GO:0000786 ... P68431 27419055
    324762 5b2i:A (3.0) BS02 dna ? GO:0000786 ... P68431 27419055
    324763 5b2i:B (3.0) BS01 dna ? GO:0000781 ... P62805 27419055
    324764 5b2i:C (3.0) BS01 dna ? GO:0000786 ... P04908 27419055
    324765 5b2i:C (3.0) BS02 dna ? GO:0000786 ... P04908 27419055
    324766 5b2i:D (3.0) BS01 dna ? GO:0000786 ... P06899 27419055
    324767 5b2i:D (3.0) BS02 dna ? GO:0000786 ... P06899 27419055
    324768 5b2i:E (3.0) BS01 dna ? GO:0000786 ... P68431 27419055
    324769 5b2i:E (3.0) BS02 dna ? GO:0000786 ... P68431 27419055
    324770 5b2i:F (3.0) BS01 dna ? GO:0000781 ... P62805 27419055
    324771 5b2i:F (3.0) BS02 dna ? GO:0000781 ... P62805 27419055
    324772 5b2i:G (3.0) BS01 dna ? GO:0000786 ... P04908 27419055
    324773 5b2i:G (3.0) BS02 dna ? GO:0000786 ... P04908 27419055
    324774 5b2i:H (3.0) BS01 dna ? GO:0000786 ... P06899 27419055
    324775 5b2i:H (3.0) BS02 dna ? GO:0000786 ... P06899 27419055
    324776 5b2j:A (2.6) BS01 dna ? GO:0000786 ... P68431 27419055
    324777 5b2j:A (2.6) BS02 dna ? GO:0000786 ... P68431 27419055
    324778 5b2j:B (2.6) BS01 dna ? GO:0000781 ... P62805 27419055
    324779 5b2j:B (2.6) BS02 dna ? GO:0000781 ... P62805 27419055
    324780 5b2j:C (2.6) BS01 dna ? GO:0000786 ... P04908 27419055
    324781 5b2j:C (2.6) BS02 dna ? GO:0000786 ... P04908 27419055
    324782 5b2j:D (2.6) BS01 dna ? GO:0000786 ... P06899 27419055
    324783 5b2j:D (2.6) BS02 dna ? GO:0000786 ... P06899 27419055
    324784 5b2j:E (2.6) BS01 dna ? GO:0000786 ... P68431 27419055
    324785 5b2j:E (2.6) BS02 dna ? GO:0000786 ... P68431 27419055
    324786 5b2j:F (2.6) BS01 dna ? GO:0000781 ... P62805 27419055
    324787 5b2j:F (2.6) BS02 dna ? GO:0000781 ... P62805 27419055
    324788 5b2j:G (2.6) BS01 dna ? GO:0000786 ... P04908 27419055
    324789 5b2j:G (2.6) BS02 dna ? GO:0000786 ... P04908 27419055
    324790 5b2j:H (2.6) BS01 dna ? GO:0000786 ... P06899 27419055
    324791 5b2j:H (2.6) BS02 dna ? GO:0000786 ... P06899 27419055
    324792 5b2n:A (1.581) BS01 RET ? GO:0007602 ... W8VZW3 27365396
    324793 5b2n:A (1.581) BS02 CL ? GO:0007602 ... W8VZW3 27365396
    324794 5b2o:A (1.7) BS01 rna 3.1.-.- GO:0003677 ... A0Q5Y3 26875867
    324795 5b2o:A (1.7) BS02 dna 3.1.-.- GO:0003677 ... A0Q5Y3 26875867
    324796 5b2o:A (1.7) BS03 dna 3.1.-.- GO:0003677 ... A0Q5Y3 26875867
    324797 5b2o:A (1.7) BS04 ZN 3.1.-.- GO:0003677 ... A0Q5Y3 26875867
    324798 5b2o:A (1.7) BS05 CA 3.1.-.- GO:0003677 ... A0Q5Y3 26875867
    324799 5b2o:A (1.7) BS06 CA 3.1.-.- GO:0003677 ... A0Q5Y3 26875867
    324800 5b2o:A (1.7) BS07 CA 3.1.-.- GO:0003677 ... A0Q5Y3 26875867

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).