SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    327401 5bw2:D (2.27) BS01 4VU ? GO:0004888 ... Q8WSF8 N/A
    327402 5bw2:E (2.27) BS01 4VU ? GO:0004888 ... Q8WSF8 N/A
    327403 5bw4:A (2.1) BS01 SAM ? N/A C7Q5P8 26609134 MOAD: Kd=68uM
    327404 5bw4:B (2.1) BS01 SAM ? N/A C7Q5P8 26609134 MOAD: Kd=68uM
    327405 5bw6:A (1.82) BS01 F6F 4.2.1.20 GO:0000162 ... P00929 26708480
    327406 5bw6:B (1.82) BS01 PLP 4.2.1.20 GO:0000162 ... P0A2K1 26708480
    327407 5bw7:A (3.0) BS01 GAL ? N/A P01857 26444434
    327408 5bw7:B (3.0) BS01 BMA ? N/A P01857 26444434
    327409 5bw8:B (2.8) BS01 peptide 3.6.-.- GO:0000750 ... Q12154 26451041
    327410 5bw8:B (2.8) BS02 ZN 3.6.-.- GO:0000750 ... Q12154 26451041
    327411 5bwa:A (3.2) BS01 PLP 4.1.1.17 GO:0001822 ... P11926 26443277
    327412 5bwb:A (2.57) BS01 4VV 3.1.1.7 GO:0001507 ... P04058 26327369
    327413 5bwc:A (2.45) BS01 HBP 3.1.1.7 GO:0001507 ... P04058 26327369 MOAD: Ki=0.061uM
    327414 5bwd:A (2.0) BS01 FUM 4.1.99.11 GO:0003824 ... O68395 26224635
    327415 5bwe:A (3.3) BS01 FUM 4.1.99.11 GO:0003824 ... O68395 26224635
    327416 5bwe:A (3.3) BS02 MBN 4.1.99.11 GO:0003824 ... O68395 26224635
    327417 5bwe:B (3.3) BS01 SF4 ? GO:0046872 ... O68396 26224635
    327418 5bwe:D (3.3) BS01 FUM 4.1.99.11 GO:0003824 ... O68395 26224635
    327419 5bwe:D (3.3) BS02 MBN 4.1.99.11 GO:0003824 ... O68395 26224635
    327420 5bwe:F (3.3) BS01 SF4 ? GO:0046872 ... O68396 26224635
    327421 5bwg:A (1.75) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327422 5bwg:B (1.75) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327423 5bwg:B (1.75) BS02 CA ? GO:0046872 ... Q45135 26485328
    327424 5bwg:C (1.75) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327425 5bwg:D (1.75) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327426 5bwh:A (1.46) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327427 5bwh:B (1.46) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327428 5bwh:B (1.46) BS02 CA ? GO:0046872 ... Q45135 26485328
    327429 5bwh:C (1.46) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327430 5bwh:C (1.46) BS02 DHY ? GO:0046872 ... Q45135 26485328
    327431 5bwh:D (1.46) BS01 FE2 ? GO:0046872 ... Q45135 26485328
    327432 5bwh:D (1.46) BS02 DHY ? GO:0046872 ... Q45135 26485328
    327433 5bwk:N (6.0) BS01 ZN 3.6.-.- GO:0000750 ... Q12154 26451041
    327434 5bwl:A (1.548) BS01 peptide 2.3.1.- GO:0036054 ... Q9NXA8 N/A
    327435 5bwl:A (1.548) BS02 ZN 2.3.1.- GO:0036054 ... Q9NXA8 N/A
    327436 5bwl:A (1.548) BS03 MCM 2.3.1.- GO:0036054 ... Q9NXA8 N/A
    327437 5bwm:A (2.5) BS01 GDP 3.6.5.2 GO:0000902 ... P61586 26067270
    327438 5bwm:A (2.5) BS02 MG 3.6.5.2 GO:0000902 ... P61586 26067270
    327439 5bwm:B (2.5) BS01 NAI ? GO:0000166 ... Q8KNY0 26067270
    327440 5bwn:A (1.942) BS01 peptide 2.3.1.286 GO:0017136 ... Q9NTG7 27501476
    327441 5bwn:A (1.942) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 27501476
    327442 5bwo:A (2.376) BS01 peptide 2.3.1.286 GO:0017136 ... Q9NTG7 27501476
    327443 5bwo:A (2.376) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 27501476
    327444 5bwr:A (2.2) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327445 5bwr:A (2.2) BS02 4VT 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=25uM
    BindingDB: IC50=25119nM
    327446 5bwr:B (2.2) BS01 4VT 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=25uM
    BindingDB: IC50=25119nM
    327447 5bwr:B (2.2) BS02 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327448 5bwr:B (2.2) BS03 4VT 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=25uM
    BindingDB: IC50=25119nM
    327449 5bwt:A (2.2) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327450 5bwt:A (2.2) BS02 4VS 2.6.1.42 GO:0003824 ... O15382 26090771 BindingDB: IC50=<630957nM
    327451 5bwt:B (2.2) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327452 5bwt:B (2.2) BS02 4VS 2.6.1.42 GO:0003824 ... O15382 26090771 BindingDB: IC50=<630957nM
    327453 5bwu:A (2.17) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327454 5bwu:A (2.17) BS02 4VR 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=0.63uM
    BindingDB: IC50=794nM
    327455 5bwu:B (2.17) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327456 5bwu:B (2.17) BS02 4VR 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=0.63uM
    BindingDB: IC50=794nM
    327457 5bwv:A (1.86) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327458 5bwv:A (1.86) BS02 775 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=79nM
    BindingDB: IC50=79nM
    327459 5bwv:B (1.86) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327460 5bwv:B (1.86) BS02 775 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=79nM
    BindingDB: IC50=79nM
    327461 5bww:A (1.82) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327462 5bww:A (1.82) BS02 4W6 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=0.5uM
    BindingDB: IC50=<10000nM
    327463 5bww:B (1.82) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327464 5bww:B (1.82) BS02 4W6 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=0.5uM
    BindingDB: IC50=<10000nM
    327465 5bwx:A (1.703) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327466 5bwx:A (1.703) BS02 4W4 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=16nM
    BindingDB: IC50=16nM
    327467 5bwx:B (1.703) BS01 PLP 2.6.1.42 GO:0003824 ... O15382 26090771
    327468 5bwx:B (1.703) BS02 4W4 2.6.1.42 GO:0003824 ... O15382 26090771 MOAD: ic50=16nM
    BindingDB: IC50=16nM
    327469 5bwz:A (1.59) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q9BY41 31633931
    327470 5bwz:A (1.59) BS02 XCH 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q9BY41 31633931
    327471 5bwz:B (1.59) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q9BY41 31633931
    327472 5bwz:B (1.59) BS02 XCH 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q9BY41 31633931
    327473 5bx0:A (2.93) BS01 4W5 2.7.12.2 GO:0004672 ... Q02750 26637553
    327474 5bx1:A (1.9) BS01 4XA 3.1.3.48 GO:0004721 ... Q93096 N/A
    327475 5bx2:A (1.61) BS01 G2F 3.2.1.45 GO:0004348 ... F6BL85 27115290
    327476 5bx2:A (1.61) BS02 CA 3.2.1.45 GO:0004348 ... F6BL85 27115290
    327477 5bx3:A (1.96) BS01 NOJ 3.2.1.45 GO:0004348 ... F6BL85 27115290 MOAD: Ki=0.13uM
    327478 5bx3:A (1.96) BS02 CA 3.2.1.45 GO:0004348 ... F6BL85 27115290
    327479 5bx4:A (1.65) BS01 GIM 3.2.1.45 GO:0004348 ... F6BL85 27115290 MOAD: Ki=0.34uM
    327480 5bx4:A (1.65) BS02 CA 3.2.1.45 GO:0004348 ... F6BL85 27115290
    327481 5bx5:A (1.85) BS01 BGC 3.2.1.45 GO:0004348 ... F6BL85 27115290 MOAD: Ki=4mM
    327482 5bx5:A (1.85) BS02 CA 3.2.1.45 GO:0004348 ... F6BL85 27115290
    327483 5bx6:A (1.89) BS01 peptide 2.7.11.11 GO:0000287 ... P17612 N/A
    327484 5bx6:A (1.89) BS02 495 2.7.11.11 GO:0000287 ... P17612 N/A
    327485 5bx7:A (1.89) BS01 peptide 2.7.11.11 GO:0000287 ... P17612 N/A
    327486 5bx7:A (1.89) BS02 4W1 2.7.11.11 GO:0000287 ... P17612 N/A
    327487 5bxa:A (1.9) BS01 MAN ? GO:0000271 ... Q9I1N2 26424791
    327488 5bxa:A (1.9) BS02 MAN ? GO:0000271 ... Q9I1N2 26424791
    327489 5bxa:A (1.9) BS03 MAN ? GO:0000271 ... Q9I1N2 26424791
    327490 5bxc:A (1.4) BS01 DA8 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 26374898
    327491 5bxc:A (1.4) BS02 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 26374898
    327492 5bxc:A (1.4) BS03 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 26374898
    327493 5bxi:A (1.7) BS01 BCT 2.7.4.6 GO:0004550 ... B9Q287 30345257
    327494 5bxi:B (1.7) BS01 BCT 2.7.4.6 GO:0004550 ... B9Q287 30345257
    327495 5bxi:C (1.7) BS01 BCT 2.7.4.6 GO:0004550 ... B9Q287 30345257
    327496 5bxi:I (1.7) BS01 BCT 2.7.4.6 GO:0004550 ... B9Q287 30345257
    327497 5bxj:A (1.24) BS01 NPO 5.2.1.8 GO:0003755 ... Q13451 26780698 MOAD: Kd=0.000227M
    327498 5bxl:G (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P21243 29654304
    327499 5bxl:H (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P25043 29654304
    327500 5bxl:I (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P25451 29654304
    327501 5bxl:K (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 29654304
    327502 5bxl:N (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P38624 29654304
    327503 5bxl:V (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P25043 29654304
    327504 5bxl:W (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P25451 29654304
    327505 5bxl:Y (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 29654304
    327506 5bxl:Z (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P23724 29654304
    327507 5bxn:G (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P21243 29654304
    327508 5bxn:H (2.8) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 29654304
    327509 5bxn:H (2.8) BS02 MG 3.4.25.1 GO:0004298 ... P25043 29654304
    327510 5bxn:I (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P25451 29654304
    327511 5bxn:K (2.8) BS01 BO2 3.4.25.1 GO:0004298 ... P30656 29654304
    327512 5bxn:K (2.8) BS02 MG 3.4.25.1 GO:0004298 ... P30656 29654304
    327513 5bxn:N (2.8) BS01 BO2 3.4.25.1 GO:0000502 ... P38624 29654304
    327514 5bxn:N (2.8) BS02 MG 3.4.25.1 GO:0000502 ... P38624 29654304
    327515 5bxn:V (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P25043 29654304
    327516 5bxn:V (2.8) BS02 BO2 3.4.25.1 GO:0004298 ... P25043 29654304
    327517 5bxn:Y (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 29654304
    327518 5bxn:Y (2.8) BS02 BO2 3.4.25.1 GO:0004298 ... P30656 29654304
    327519 5bxn:b (2.8) BS01 BO2 3.4.25.1 GO:0000502 ... P38624 29654304
    327520 5bxo:A (1.334) BS01 peptide 2.4.2.-
    2.4.2.30
    N/A Q9H2K2 N/A
    327521 5bxo:B (1.334) BS01 peptide 2.4.2.-
    2.4.2.30
    N/A Q9H2K2 N/A
    327522 5bxp:A (1.7) BS01 LOG 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327523 5bxp:A (1.7) BS02 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327524 5bxp:B (1.7) BS01 LOG 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327525 5bxp:B (1.7) BS02 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327526 5bxq:C (2.5) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9533885
    327527 5bxq:D (2.5) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9533885
    327528 5bxq:E (2.5) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9533885
    327529 5bxr:A (1.6) BS01 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327530 5bxr:A (1.6) BS02 NOK 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327531 5bxr:B (1.6) BS01 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327532 5bxr:B (1.6) BS02 NOK 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327533 5bxs:A (2.2) BS01 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327534 5bxs:A (2.2) BS02 GC2 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327535 5bxs:B (2.2) BS01 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327536 5bxs:B (2.2) BS02 GC2 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327537 5bxt:A (1.8) BS01 4WS 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327538 5bxt:A (1.8) BS02 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327539 5bxt:B (1.8) BS01 4WS 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327540 5bxt:B (1.8) BS02 GAL 3.2.1.140 GO:0004553 ... B3TLD6 26312778
    327541 5bxu:A (1.35) BS01 peptide 2.4.2.-
    2.4.2.30
    N/A Q9H2K2 N/A
    327542 5bxv:A (2.1) BS01 MGP ? GO:0003723 ... P63073 26170285 BindingDB: Kd=10nM
    327543 5bxv:C (2.1) BS01 MGP ? GO:0003723 ... P63073 26170285 BindingDB: Kd=10nM
    327544 5bxy:A (1.75) BS01 SAH 2.1.1.- GO:0008168 ... Q2S3S9 N/A
    327545 5bxy:B (1.75) BS01 SAH 2.1.1.- GO:0008168 ... Q2S3S9 N/A
    327546 5by0:A (1.8) BS01 MG 3.1.3.- GO:0005634 ... Q04371 N/A
    327547 5by6:A (1.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327548 5by6:A (1.9) BS02 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327549 5by6:B (1.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327550 5by6:B (1.9) BS02 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327551 5by6:C (1.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327552 5by6:C (1.9) BS02 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327553 5by6:D (1.9) BS01 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327554 5by6:D (1.9) BS02 UMP 2.1.1.45 GO:0004799 ... Q9NDD3 28826032
    327555 5bya:A (1.9) BS01 ADP 2.7.4.24 GO:0000829 ... O43314 26153667
    327556 5bya:A (1.9) BS02 4WZ 2.7.4.24 GO:0000829 ... O43314 26153667
    327557 5bya:A (1.9) BS03 MG 2.7.4.24 GO:0000829 ... O43314 26153667
    327558 5bya:A (1.9) BS04 MG 2.7.4.24 GO:0000829 ... O43314 26153667
    327559 5bya:A (1.9) BS05 MG 2.7.4.24 GO:0000829 ... O43314 26153667
    327560 5bya:A (1.9) BS06 ACT 2.7.4.24 GO:0000829 ... O43314 26153667
    327561 5byb:A (2.3) BS01 ADP 2.7.4.24 GO:0000829 ... O43314 26153667
    327562 5byb:A (2.3) BS02 4WY 2.7.4.24 GO:0000829 ... O43314 26153667
    327563 5byb:A (2.3) BS03 MG 2.7.4.24 GO:0000829 ... O43314 26153667
    327564 5byb:A (2.3) BS04 MG 2.7.4.24 GO:0000829 ... O43314 26153667
    327565 5byb:A (2.3) BS05 MG 2.7.4.24 GO:0000829 ... O43314 26153667
    327566 5byf:A (2.0) BS01 AMP 2.7.1.15 GO:0004747 ... Q9H477 N/A
    327567 5byf:B (2.0) BS01 AMP 2.7.1.15 GO:0004747 ... Q9H477 N/A
    327568 5byg:A (2.5) BS01 dna ? N/A Q89268 26370092
    327569 5byg:A (2.5) BS02 dna ? N/A Q89268 26370092
    327570 5byg:B (2.5) BS01 dna ? N/A Q89268 26370092
    327571 5byg:B (2.5) BS02 dna ? N/A Q89268 26370092
    327572 5byg:B (2.5) BS03 MG ? N/A Q89268 26370092
    327573 5byg:C (2.5) BS01 dna ? N/A Q89268 26370092
    327574 5byg:C (2.5) BS02 dna ? N/A Q89268 26370092
    327575 5byg:D (2.5) BS01 dna ? N/A Q89268 26370092
    327576 5byg:D (2.5) BS02 dna ? N/A Q89268 26370092
    327577 5byi:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26199669
    327578 5byi:A (1.15) BS02 HGB 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26199669
    327579 5byi:A (1.15) BS03 4WA 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26199669 MOAD: Ki=30.7nM
    BindingDB: Ki=106nM
    327580 5byj:A (1.8) BS01 A3P ? GO:0016740 ... G4VLE5 26485649
    327581 5byj:A (1.8) BS02 OQR ? GO:0016740 ... G4VLE5 26485649
    327582 5byk:A (1.28) BS01 A3P ? GO:0016740 ... G4VLE5 26485649
    327583 5byk:A (1.28) BS02 OAQ ? GO:0016740 ... G4VLE5 26485649
    327584 5byl:A (2.15) BS01 MG 2.3.1.-
    2.7.1.190
    N/A P0A0C1 27161980
    327585 5byl:B (2.15) BS01 MG 2.3.1.-
    2.7.1.190
    N/A P0A0C1 27161980
    327586 5byl:C (2.15) BS01 MG 2.3.1.-
    2.7.1.190
    N/A P0A0C1 27161980
    327587 5byl:D (2.15) BS01 MG 2.3.1.-
    2.7.1.190
    N/A P0A0C1 27161980
    327588 5bym:A (2.708) BS01 rna ? GO:0003723 ... P39016 26364903
    327589 5byn:A (2.651) BS01 CA ? GO:0005515 ... P81460 N/A
    327590 5byn:A (2.651) BS02 MN ? GO:0005515 ... P81460 N/A
    327591 5byn:A (2.651) BS03 4WM ? GO:0005515 ... P81460 N/A
    327592 5byn:B (2.651) BS01 4WM ? GO:0005515 ... P81460 N/A
    327593 5byn:B (2.651) BS02 4WM ? GO:0005515 ... P81460 N/A
    327594 5byn:B (2.651) BS03 CA ? GO:0005515 ... P81460 N/A
    327595 5byn:B (2.651) BS04 MN ? GO:0005515 ... P81460 N/A
    327596 5byq:A (1.73) BS01 SF4 1.12.7.2 GO:0005506 ... P29166 29896366
    327597 5byq:A (1.73) BS02 SF4 1.12.7.2 GO:0005506 ... P29166 29896366
    327598 5byq:A (1.73) BS03 SF4 1.12.7.2 GO:0005506 ... P29166 29896366
    327599 5byq:A (1.73) BS04 SF4 1.12.7.2 GO:0005506 ... P29166 29896366
    327600 5byq:A (1.73) BS05 FES 1.12.7.2 GO:0005506 ... P29166 29896366

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).