SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    328401 5c5r:A (1.55) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26396691
    328402 5c5r:A (1.55) BS02 0E1 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26396691 BindingDB: IC50=1700nM
    328403 5c5r:B (1.55) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26396691
    328404 5c5r:B (1.55) BS02 0E1 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 26396691 BindingDB: IC50=1700nM
    328405 5c5t:A (1.598) BS01 AKG ? GO:0005506 ... Q84406 26368022 MOAD: Kd=681uM
    328406 5c5t:A (1.598) BS02 ZN ? GO:0005506 ... Q84406 26368022
    328407 5c5t:A (1.598) BS03 MN ? GO:0005506 ... Q84406 26368022
    328408 5c5t:B (1.598) BS01 AKG ? GO:0005506 ... Q84406 26368022 MOAD: Kd=681uM
    328409 5c5t:B (1.598) BS02 ZN ? GO:0005506 ... Q84406 26368022
    328410 5c5u:A (1.7) BS01 MN ? GO:0005506 ... Q84406 26368022
    328411 5c5u:B (1.7) BS01 MN ? GO:0005506 ... Q84406 26368022
    328412 5c5v:A (2.35) BS01 2PN 3.6.1.1 GO:0000287 ... Q384W5 26494625
    328413 5c5v:A (2.35) BS02 MG 3.6.1.1 GO:0000287 ... Q384W5 26494625
    328414 5c5v:A (2.35) BS03 MG 3.6.1.1 GO:0000287 ... Q384W5 26494625
    328415 5c5v:B (2.35) BS01 2PN 3.6.1.1 GO:0000287 ... Q384W5 26494625
    328416 5c5v:B (2.35) BS02 MG 3.6.1.1 GO:0000287 ... Q384W5 26494625
    328417 5c5v:B (2.35) BS03 MG 3.6.1.1 GO:0000287 ... Q384W5 26494625
    328418 5c5x:A (2.6) BS01 PS6 ? GO:0005515 ... P55064 26569106
    328419 5c5x:B (2.6) BS01 PS6 ? GO:0005515 ... P55064 26569106
    328420 5c5x:C (2.6) BS01 PS6 ? GO:0005515 ... P55064 26569106
    328421 5c5x:D (2.6) BS01 PS6 ? GO:0005515 ... P55064 26569106
    328422 5c5x:E (2.6) BS01 PS6 ? GO:0005515 ... P55064 26569106
    328423 5c5x:H (2.6) BS01 PS6 ? GO:0005515 ... P55064 26569106
    328424 5c65:A (2.65) BS01 37X ? GO:0005353 ... P11169 N/A
    328425 5c65:A (2.65) BS02 37X ? GO:0005353 ... P11169 N/A
    328426 5c65:A (2.65) BS03 37X ? GO:0005353 ... P11169 N/A
    328427 5c65:A (2.65) BS04 Y01 ? GO:0005353 ... P11169 N/A
    328428 5c65:A (2.65) BS05 37X ? GO:0005353 ... P11169 N/A
    328429 5c65:B (2.65) BS01 37X ? GO:0005353 ... P11169 N/A
    328430 5c65:B (2.65) BS02 37X ? GO:0005353 ... P11169 N/A
    328431 5c65:B (2.65) BS03 37X ? GO:0005353 ... P11169 N/A
    328432 5c65:B (2.65) BS04 Y01 ? GO:0005353 ... P11169 N/A
    328433 5c66:A (2.03) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 27189921
    328434 5c66:A (2.03) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 27189921
    328435 5c66:A (2.03) BS03 ZN 3.1.3.1 GO:0000287 ... P00634 27189921
    328436 5c66:A (2.03) BS04 WO4 3.1.3.1 GO:0000287 ... P00634 27189921
    328437 5c66:B (2.03) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 27189921
    328438 5c66:B (2.03) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 27189921
    328439 5c66:B (2.03) BS03 ZN 3.1.3.1 GO:0000287 ... P00634 27189921
    328440 5c66:B (2.03) BS04 WO4 3.1.3.1 GO:0000287 ... P00634 27189921
    328441 5c6a:A (1.85) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    328442 5c6a:A (1.85) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    328443 5c6c:A (2.05) BS01 CMP 2.7.11.12 GO:0005952 ... Q13237 26769964 MOAD: Kd=418nM
    328444 5c6c:A (2.05) BS02 CO 2.7.11.12 GO:0005952 ... Q13237 26769964
    328445 5c6c:A (2.05) BS03 CA 2.7.11.12 GO:0005952 ... Q13237 26769964
    328446 5c6c:B (2.05) BS01 CMP 2.7.11.12 GO:0005952 ... Q13237 26769964 MOAD: Kd=418nM
    328447 5c6c:B (2.05) BS02 CA 2.7.11.12 GO:0005952 ... Q13237 26769964
    328448 5c6d:A (2.292) BS01 peptide 3.4.19.12 N/A Q93009 26299963
    328449 5c6d:B (2.292) BS01 peptide 3.4.19.12 N/A Q93009 26299963
    328450 5c6e:A (1.7) BS01 HEM ? GO:0004601 ... P01958 27377386
    328451 5c6e:B (1.7) BS01 HEM ? GO:0004601 ... P02062 27377386
    328452 5c6f:A (2.0) BS01 FE 1.16.3.2 GO:0004322 ... Q9ZLI1 27777002
    328453 5c6f:B (2.0) BS01 FE 1.16.3.2 GO:0004322 ... Q9ZLI1 27777002
    328454 5c6f:J (2.0) BS01 FE 1.16.3.2 GO:0004322 ... Q9ZLI1 27777002
    328455 5c6f:K (2.0) BS01 FE 1.16.3.2 GO:0004322 ... Q9ZLI1 27777002
    328456 5c6h:A (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328457 5c6h:C (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328458 5c6h:C (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328459 5c6h:E (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328460 5c6h:E (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328461 5c6h:G (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328462 5c6h:G (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328463 5c6h:I (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328464 5c6h:I (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328465 5c6h:K (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328466 5c6h:K (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328467 5c6h:M (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328468 5c6h:M (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328469 5c6h:O (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328470 5c6h:O (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328471 5c6h:Q (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328472 5c6h:Q (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328473 5c6h:Q (2.05) BS03 peptide ? GO:0042981 ... Q07820 N/A
    328474 5c6h:S (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328475 5c6h:U (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328476 5c6h:U (2.05) BS02 peptide ? GO:0042981 ... Q07820 N/A
    328477 5c6h:W (2.05) BS01 peptide ? GO:0042981 ... Q07820 N/A
    328478 5c6i:A (1.9) BS01 DO3 3.2.1.17 GO:0003796 ... P00698 26594370
    328479 5c6j:A (2.1) BS01 DO3 3.2.1.17 GO:0003796 ... P00698 26594370
    328480 5c6l:A (2.1) BS01 DO3 3.2.1.17 GO:0003796 ... P00698 26594370
    328481 5c6o:A (3.0) BS01 4YH ? GO:0005886 ... Q9KAX3 26246409
    328482 5c6p:A (3.0) BS01 4YH ? GO:0005886 ... Q5F9J8 26246409
    328483 5c6q:A (3.251) BS01 ZN ? GO:0006355 ... Q5NBT9 26601214
    328484 5c6s:A (1.3) BS01 4K8 ? N/A P55201 N/A
    328485 5c6u:A (1.83) BS01 PLP 2.6.1.1 GO:0004069 ... O69689 N/A
    328486 5c6v:A (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328487 5c6v:B (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328488 5c6v:C (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328489 5c6v:D (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328490 5c6x:A (1.5) BS01 CO ? N/A D1A230 N/A
    328491 5c6y:A (1.793) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 26458300
    328492 5c71:A (2.62) BS01 CBW 3.2.1.31 GO:0004553 ... A7XS03 29146597
    328493 5c71:A (2.62) BS02 GCU 3.2.1.31 GO:0004553 ... A7XS03 29146597
    328494 5c71:C (2.62) BS01 CBW 3.2.1.31 GO:0004553 ... A7XS03 29146597
    328495 5c71:C (2.62) BS02 GCU 3.2.1.31 GO:0004553 ... A7XS03 29146597
    328496 5c77:A (2.5) BS01 SAH 2.1.1.- GO:0005575 ... Q12314 27462434
    328497 5c77:B (2.5) BS01 SAH 2.1.1.- GO:0005575 ... Q12314 27462434
    328498 5c79:A (1.6) BS01 PBU ? GO:0005096 ... Q9QWY8 26365802 MOAD: Kd=7uM
    328499 5c79:B (1.6) BS01 PBU ? GO:0005096 ... Q9QWY8 26365802 MOAD: Kd=7uM
    328500 5c79:B (1.6) BS02 PBU ? GO:0005096 ... Q9QWY8 26365802 MOAD: Kd=7uM
    328501 5c7a:A (2.36) BS01 ZN 2.3.2.27 N/A P98170 26218264
    328502 5c7a:A (2.36) BS02 4YE 2.3.2.27 N/A P98170 26218264
    328503 5c7b:A (2.68) BS01 ZN 2.3.2.27 N/A P98170 26218264
    328504 5c7b:A (2.68) BS02 4YD 2.3.2.27 N/A P98170 26218264
    328505 5c7c:A (2.32) BS01 ZN 2.3.2.27 N/A P98170 26218264
    328506 5c7c:A (2.32) BS02 4YC 2.3.2.27 N/A P98170 26218264 MOAD: ic50=5.5uM
    328507 5c7d:A (2.25) BS01 ZN 2.3.2.27 N/A P98170 26218264
    328508 5c7d:A (2.25) BS02 4YF 2.3.2.27 N/A P98170 26218264 MOAD: ic50=7.7uM
    328509 5c7e:A (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328510 5c7e:A (3.1) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328511 5c7e:B (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328512 5c7e:B (3.1) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328513 5c7e:C (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328514 5c7e:C (3.1) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328515 5c7e:D (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328516 5c7e:D (3.1) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328517 5c7e:E (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328518 5c7e:E (3.1) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328519 5c7e:F (3.1) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328520 5c7e:F (3.1) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328521 5c7f:A (2.7) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328522 5c7f:A (2.7) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328523 5c7f:B (2.7) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328524 5c7f:C (2.7) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328525 5c7f:D (2.7) BS01 peptide ? GO:0006355 ... Q5NBT9 26601214
    328526 5c7f:D (2.7) BS02 ZN ? GO:0006355 ... Q5NBT9 26601214
    328527 5c7h:A (1.3) BS01 NDP 1.1.1.- GO:0000166 ... Q92NR7 N/A
    328528 5c7k:A (4.6019) BS01 MAN ? N/A S6B291 26457433
    328529 5c7k:A (4.6019) BS02 MAN ? N/A S6B291 26457433
    328530 5c7k:B (4.6019) BS01 MAN N/A N/A N/A 26457433
    328531 5c7k:E (4.6019) BS01 BMA ? N/A P01857 26457433
    328532 5c7k:E (4.6019) BS02 MAN ? N/A P01857 26457433
    328533 5c7k:E (4.6019) BS03 MAN ? N/A P01857 26457433
    328534 5c7k:E (4.6019) BS04 MAN ? N/A P01857 26457433
    328535 5c7k:E (4.6019) BS05 MAN ? N/A P01857 26457433
    328536 5c7k:F (4.6019) BS01 BMA ? GO:0002250 ... P01834 26457433
    328537 5c7n:A (1.75) BS01 BMF ? N/A P55201 27167503 MOAD: Kd=0.27uM
    BindingDB: IC50=141nM
    328538 5c7o:O (1.729) BS01 NAD 1.2.1.12 GO:0006006 ... O14556 26921398
    328539 5c7o:P (1.729) BS01 NAD 1.2.1.12 GO:0006006 ... O14556 26921398
    328540 5c7r:A (1.94) BS01 GLC ? GO:0005515 ... P0AEX9 26371748
    328541 5c7r:A (1.94) BS02 GLC ? GO:0005515 ... P0AEX9 26371748
    328542 5c7r:A (1.94) BS03 GLC ? GO:0005515 ... P0AEX9 26371748
    328543 5c7r:B (1.94) BS01 GLC ? GO:0005515 ... P0AEX9 26371748
    328544 5c7r:B (1.94) BS02 GLC ? GO:0005515 ... P0AEX9 26371748
    328545 5c7r:B (1.94) BS03 GLC ? GO:0005515 ... P0AEX9 26371748
    328546 5c7s:A (2.1) BS01 MN 2.4.2.18 GO:0000162 ... P9WFX5 N/A
    328547 5c7s:A (2.1) BS02 MN 2.4.2.18 GO:0000162 ... P9WFX5 N/A
    328548 5c7s:A (2.1) BS03 PRP 2.4.2.18 GO:0000162 ... P9WFX5 N/A
    328549 5c7s:B (2.1) BS01 MN 2.4.2.18 GO:0000162 ... P9WFX5 N/A
    328550 5c7s:B (2.1) BS02 MN 2.4.2.18 GO:0000162 ... P9WFX5 N/A
    328551 5c7s:B (2.1) BS03 PRP 2.4.2.18 GO:0000162 ... P9WFX5 N/A
    328552 5c7t:A (2.06) BS01 APR 3.6.1.13 GO:0005829 ... Q6MIH8 26524597
    328553 5c7t:A (2.06) BS02 APR 3.6.1.13 GO:0005829 ... Q6MIH8 26524597
    328554 5c7t:B (2.06) BS01 APR 3.6.1.13 GO:0005829 ... Q6MIH8 26524597
    328555 5c7t:B (2.06) BS02 APR 3.6.1.13 GO:0005829 ... Q6MIH8 26524597
    328556 5c7v:A (2.504) BS01 MG 2.3.3.9 GO:0000287 ... P9WK17 27738104
    328557 5c7v:A (2.504) BS02 PYC 2.3.3.9 GO:0000287 ... P9WK17 27738104
    328558 5c7y:A (1.75) BS01 ZFR ? GO:0009636 ... Q8NKB0 N/A
    328559 5c7y:B (1.75) BS01 ZFR ? GO:0009636 ... Q8NKB0 N/A
    328560 5c7z:A (2.77) BS01 peptide ? GO:0006886 ... P84092 N/A
    328561 5c80:A (2.243) BS01 URI 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    328562 5c80:B (2.243) BS01 URI 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    328563 5c80:C (2.243) BS01 URI 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    328564 5c80:D (2.243) BS01 URI 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    328565 5c80:E (2.243) BS01 URI 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    328566 5c80:F (2.243) BS01 URI 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    328567 5c81:A (1.8) BS01 ZFR ? GO:0009636 ... Q8NKB0 N/A
    328568 5c81:B (1.8) BS01 ZFR ? GO:0009636 ... Q8NKB0 N/A
    328569 5c83:A (2.33) BS01 ZN 2.3.2.27 N/A P98170 26218264
    328570 5c83:A (2.33) BS02 4YN 2.3.2.27 N/A P98170 26218264 MOAD: ic50=0.16uM
    328571 5c84:A (2.36) BS01 ZN 2.3.2.27 N/A P98170 26218264
    328572 5c84:A (2.36) BS02 4YL 2.3.2.27 N/A P98170 26218264 MOAD: ic50=0.64uM
    328573 5c85:A (1.7) BS01 4YO ? N/A P55201 27167503 MOAD: Kd=105uM
    BindingDB: Kd=105000nM
    328574 5c87:A (1.55) BS01 4YS ? N/A P55201 27167503 BindingDB: Kd=>200000nM
    328575 5c88:A (2.49) BS01 COA 2.3.1.255
    2.3.1.258
    GO:0004596 ... Q980R9 26593285
    328576 5c88:B (2.49) BS01 COA 2.3.1.255
    2.3.1.258
    GO:0004596 ... Q980R9 26593285
    328577 5c89:A (1.65) BS01 4YT ? N/A P55201 N/A
    328578 5c8a:A (2.15) BS01 B12 ? GO:0031419 ... Q746J7 26416754
    328579 5c8a:B (2.15) BS01 B12 ? GO:0031419 ... Q746J7 26416754
    328580 5c8a:C (2.15) BS01 B12 ? GO:0031419 ... Q746J7 26416754
    328581 5c8a:D (2.15) BS01 B12 ? GO:0031419 ... Q746J7 26416754
    328582 5c8b:B (2.7) BS01 BGC 2.4.1.7 GO:0004645 ... A0ZZH6 26527586
    328583 5c8d:A (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328584 5c8d:B (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328585 5c8d:C (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328586 5c8d:D (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328587 5c8d:E (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328588 5c8d:F (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328589 5c8d:G (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328590 5c8d:H (2.8) BS01 B12 ? GO:0003677 ... Q746J7 26416754
    328591 5c8e:A (3.89) BS01 dna ? GO:0003677 ... Q746J7 26416754
    328592 5c8e:A (3.89) BS02 dna ? GO:0003677 ... Q746J7 26416754
    328593 5c8e:A (3.89) BS03 dna ? GO:0003677 ... Q746J7 26416754
    328594 5c8e:A (3.89) BS04 B12 ? GO:0003677 ... Q746J7 26416754
    328595 5c8e:B (3.89) BS01 dna ? GO:0003677 ... Q746J7 26416754
    328596 5c8e:B (3.89) BS02 dna ? GO:0003677 ... Q746J7 26416754
    328597 5c8e:B (3.89) BS03 B12 ? GO:0003677 ... Q746J7 26416754
    328598 5c8e:C (3.89) BS01 dna ? GO:0003677 ... Q746J7 26416754
    328599 5c8e:C (3.89) BS02 dna ? GO:0003677 ... Q746J7 26416754
    328600 5c8e:C (3.89) BS03 B12 ? GO:0003677 ... Q746J7 26416754

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).