SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    329601 5cgz:A (2.103) BS01 ZN 4.2.1.83 GO:0009056 ... Q88JX8 26867578
    329602 5cgz:B (2.103) BS01 ZN 4.2.1.83 GO:0009056 ... Q88JX8 26867578
    329603 5ch5:A (1.53) BS01 DPF 3.1.1.- GO:0052689 ... Q25252 27210287
    329604 5ch7:A (2.2) BS01 SF4 ? GO:0016020 ... G8QM55 26940877
    329605 5ch7:A (2.2) BS02 MO ? GO:0016020 ... G8QM55 26940877
    329606 5ch7:A (2.2) BS03 MGD ? GO:0016020 ... G8QM55 26940877
    329607 5ch7:A (2.2) BS04 MD1 ? GO:0016020 ... G8QM55 26940877
    329608 5ch7:A (2.2) BS05 ZN ? GO:0016020 ... G8QM55 26940877
    329609 5ch7:A (2.2) BS06 SO3 ? GO:0016020 ... G8QM55 26940877
    329610 5ch7:B (2.2) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    329611 5ch7:B (2.2) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    329612 5ch7:B (2.2) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    329613 5ch7:B (2.2) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    329614 5ch7:C (2.2) BS01 SF4 ? GO:0016020 ... G8QM55 26940877
    329615 5ch7:C (2.2) BS02 MO ? GO:0016020 ... G8QM55 26940877
    329616 5ch7:C (2.2) BS03 MGD ? GO:0016020 ... G8QM55 26940877
    329617 5ch7:C (2.2) BS04 MD1 ? GO:0016020 ... G8QM55 26940877
    329618 5ch7:C (2.2) BS05 SO3 ? GO:0016020 ... G8QM55 26940877
    329619 5ch7:C (2.2) BS06 ZN ? GO:0016020 ... G8QM55 26940877
    329620 5ch7:D (2.2) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    329621 5ch7:D (2.2) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    329622 5ch7:D (2.2) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    329623 5ch7:D (2.2) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    329624 5ch7:E (2.2) BS01 SF4 ? GO:0016020 ... G8QM55 26940877
    329625 5ch7:E (2.2) BS02 MO ? GO:0016020 ... G8QM55 26940877
    329626 5ch7:E (2.2) BS03 MGD ? GO:0016020 ... G8QM55 26940877
    329627 5ch7:E (2.2) BS04 MD1 ? GO:0016020 ... G8QM55 26940877
    329628 5ch7:E (2.2) BS05 ZN ? GO:0016020 ... G8QM55 26940877
    329629 5ch7:F (2.2) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    329630 5ch7:F (2.2) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    329631 5ch7:F (2.2) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    329632 5ch7:F (2.2) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    329633 5ch8:A (1.62) BS01 ZN 3.1.1.- GO:0005576 ... P61869 N/A
    329634 5ch8:A (1.62) BS02 ZN 3.1.1.- GO:0005576 ... P61869 N/A
    329635 5ch9:A (1.9) BS01 CO 3.5.-.- GO:0008270 ... Q5KZU5 N/A
    329636 5ch9:A (1.9) BS02 CO 3.5.-.- GO:0008270 ... Q5KZU5 N/A
    329637 5ch9:B (1.9) BS01 CO 3.5.-.- GO:0008270 ... Q5KZU5 N/A
    329638 5ch9:B (1.9) BS02 CO 3.5.-.- GO:0008270 ... Q5KZU5 N/A
    329639 5cha:B (1.67) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 3980476
    329640 5cha:F (1.67) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 3980476
    329641 5cha:G (1.67) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 3980476
    329642 5chb:B (1.55) BS01 CL N/A N/A N/A 26136355
    329643 5chb:C (1.55) BS01 CL N/A N/A N/A 26136355
    329644 5chc:A (2.38) BS01 SF4 ? GO:0016020 ... G8QM55 26940877
    329645 5chc:A (2.38) BS02 MO ? GO:0016020 ... G8QM55 26940877
    329646 5chc:A (2.38) BS03 MGD ? GO:0016020 ... G8QM55 26940877
    329647 5chc:A (2.38) BS04 MD1 ? GO:0016020 ... G8QM55 26940877
    329648 5chc:A (2.38) BS05 BSY ? GO:0016020 ... G8QM55 26940877
    329649 5chc:B (2.38) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    329650 5chc:B (2.38) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    329651 5chc:B (2.38) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    329652 5chc:B (2.38) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    329653 5chc:C (2.38) BS01 SF4 ? GO:0016020 ... G8QM55 26940877
    329654 5chc:C (2.38) BS02 MO ? GO:0016020 ... G8QM55 26940877
    329655 5chc:C (2.38) BS03 MGD ? GO:0016020 ... G8QM55 26940877
    329656 5chc:C (2.38) BS04 MD1 ? GO:0016020 ... G8QM55 26940877
    329657 5chc:C (2.38) BS05 BSY ? GO:0016020 ... G8QM55 26940877
    329658 5chc:D (2.38) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    329659 5chc:D (2.38) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    329660 5chc:D (2.38) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    329661 5chc:D (2.38) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    329662 5chc:E (2.38) BS01 SF4 ? GO:0016020 ... G8QM55 26940877
    329663 5chc:E (2.38) BS02 MO ? GO:0016020 ... G8QM55 26940877
    329664 5chc:E (2.38) BS03 MGD ? GO:0016020 ... G8QM55 26940877
    329665 5chc:E (2.38) BS04 MD1 ? GO:0016020 ... G8QM55 26940877
    329666 5chc:E (2.38) BS05 BSY ? GO:0016020 ... G8QM55 26940877
    329667 5chc:F (2.38) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    329668 5chc:F (2.38) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    329669 5chc:F (2.38) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    329670 5chc:F (2.38) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    329671 5chg:A (2.9) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    329672 5chg:A (2.9) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    329673 5chg:A (2.9) BS03 MG 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    329674 5chg:B (2.9) BS01 MG 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    329675 5chg:B (2.9) BS02 DGT 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    329676 5chi:A (2.472) BS01 dna ? GO:0046872 ... Q8TZE9 N/A
    329677 5chi:A (2.472) BS02 MG ? GO:0046872 ... Q8TZE9 N/A
    329678 5chi:A (2.472) BS03 MG ? GO:0046872 ... Q8TZE9 N/A
    329679 5chi:B (2.472) BS01 dna ? GO:0046872 ... Q8TZE9 N/A
    329680 5chi:B (2.472) BS02 MG ? GO:0046872 ... Q8TZE9 N/A
    329681 5chi:B (2.472) BS03 MG ? GO:0046872 ... Q8TZE9 N/A
    329682 5chi:C (2.472) BS01 dna ? GO:0046872 ... Q8TZE9 N/A
    329683 5chj:A (1.358) BS01 SM2 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329684 5chj:A (1.358) BS02 ZN 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329685 5chj:A (1.358) BS03 ZN 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329686 5chj:B (1.358) BS01 SM2 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329687 5chj:B (1.358) BS02 ZN 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329688 5chj:B (1.358) BS03 ZN 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329689 5chk:A (2.2) BS01 55R ? GO:0005576 ... P02701 N/A
    329690 5chm:A (1.9) BS01 CB4 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329691 5chm:A (1.9) BS02 ZN 3.5.2.6 GO:0008800 ... Q9L387 32349291
    329692 5cho:A (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329693 5cho:A (2.37) BS02 FAD ? GO:0000166 ... M9QXS1 N/A
    329694 5cho:B (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329695 5cho:C (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329696 5cho:C (2.37) BS02 FAD ? GO:0000166 ... M9QXS1 N/A
    329697 5cho:D (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329698 5cho:D (2.37) BS02 FAD ? GO:0000166 ... M9QXS1 N/A
    329699 5cho:E (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329700 5cho:F (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329701 5cho:G (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329702 5cho:H (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    329703 5chp:A (1.7) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 N/A
    329704 5chp:A (1.7) BS02 51Q 2.1.1.148 GO:0004799 ... Q9WYT0 N/A
    329705 5chq:A (1.87) BS01 HEM ? GO:0004601 ... Q9NAV7 27070125
    329706 5chq:A (1.87) BS02 NPO ? GO:0004601 ... Q9NAV7 27070125 MOAD: Kd=262uM
    329707 5chq:B (1.87) BS01 HEM ? GO:0004601 ... Q9NAV7 27070125
    329708 5chq:B (1.87) BS02 NPO ? GO:0004601 ... Q9NAV7 27070125 MOAD: Kd=262uM
    329709 5chr:A (1.98) BS01 HEM ? GO:0004601 ... Q9NAV7 27070125
    329710 5chr:A (1.98) BS02 4NC ? GO:0004601 ... Q9NAV7 27070125 MOAD: Kd=40uM
    329711 5chr:B (1.98) BS01 HEM ? GO:0004601 ... Q9NAV7 27070125
    329712 5chr:B (1.98) BS02 4NC ? GO:0004601 ... Q9NAV7 27070125 MOAD: Kd=40uM
    329713 5cht:A (2.8) BS01 ZN 3.4.19.12 GO:0004843 ... Q9WTV6 28165509
    329714 5cht:A (2.8) BS02 ZN 3.4.19.12 GO:0004843 ... Q9WTV6 28165509
    329715 5cht:B (2.8) BS01 ZN 3.4.19.12 GO:0004843 ... Q9WTV6 28165509
    329716 5cht:B (2.8) BS02 ZN 3.4.19.12 GO:0004843 ... Q9WTV6 28165509
    329717 5chu:B (1.1) BS01 ZN 3.5.2.6 GO:0008800 ... Q9L387 N/A
    329718 5chv:A (3.005) BS01 ZN 3.4.19.12 GO:0004843 ... Q9WTV6 28165509
    329719 5chv:B (3.005) BS01 ZN 3.4.19.12 GO:0004843 ... Q9WTV6 28165509
    329720 5chy:A (2.0) BS01 CA ? GO:0000156 ... P0AE67 9030562
    329721 5chz:A (1.83) BS01 dna 3.2.2.- GO:0003677 ... O95243 N/A
    329722 5chz:A (1.83) BS02 dna 3.2.2.- GO:0003677 ... O95243 N/A
    329723 5chz:A (1.83) BS03 dna 3.2.2.- GO:0003677 ... O95243 N/A
    329724 5chz:A (1.83) BS04 MG 3.2.2.- GO:0003677 ... O95243 N/A
    329725 5ci0:A (2.25) BS01 FEO N/A GO:0009263 ... N/A 27276098
    329726 5ci1:A (1.95) BS01 FEO N/A GO:0009263 ... N/A 27276098
    329727 5ci2:A (2.25) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 27276098
    329728 5ci3:A (2.401) BS01 FEO 1.17.4.1 GO:0004748 ... P69925 27276098
    329729 5ci4:A (2.05) BS01 FEO N/A GO:0009263 ... N/A 27276098
    329730 5ci5:A (1.61) BS01 T6T ? N/A A8F7X5 N/A
    329731 5ci5:B (1.61) BS01 T6T ? N/A A8F7X5 N/A
    329732 5ci7:A (1.74) BS01 51W 2.7.11.1 GO:0004672 ... O75385 26275681 MOAD: ic50=120nM
    BindingDB: IC50=120nM
    329733 5ci8:A (2.328) BS01 53Y ? GO:0003714 ... P50616 26518565
    329734 5ci9:A (2.3) BS01 549 ? GO:0003714 ... P50616 26518565
    329735 5ci9:A (2.3) BS02 549 ? GO:0003714 ... P50616 26518565
    329736 5cib:A (3.011) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329737 5cib:A (3.011) BS02 51S 1.11.1.5 GO:0004601 ... P00431 27499202
    329738 5cib:B (3.011) BS01 HEC ? GO:0005515 ... P00044 27499202
    329739 5cib:C (3.011) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329740 5cib:C (3.011) BS02 51S 1.11.1.5 GO:0004601 ... P00431 27499202
    329741 5cib:D (3.011) BS01 HEC ? GO:0005515 ... P00044 27499202
    329742 5cic:A (2.103) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329743 5cic:A (2.103) BS02 51R 1.11.1.5 GO:0004601 ... P00431 27499202
    329744 5cic:B (2.103) BS01 HEC ? GO:0005515 ... P00044 27499202
    329745 5cic:C (2.103) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329746 5cic:C (2.103) BS02 51R 1.11.1.5 GO:0004601 ... P00431 27499202
    329747 5cic:D (2.103) BS01 HEC ? GO:0005515 ... P00044 27499202
    329748 5cid:A (2.763) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329749 5cid:A (2.763) BS02 51V 1.11.1.5 GO:0004601 ... P00431 27499202
    329750 5cid:B (2.763) BS01 HEC ? GO:0005515 ... P00044 27499202
    329751 5cid:C (2.763) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329752 5cid:C (2.763) BS02 51V 1.11.1.5 GO:0004601 ... P00431 27499202
    329753 5cid:D (2.763) BS01 HEC ? GO:0005515 ... P00044 27499202
    329754 5cie:A (2.6) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329755 5cie:A (2.6) BS02 ANL 1.11.1.5 GO:0004601 ... P00431 27499202
    329756 5cie:B (2.6) BS01 HEC ? GO:0005515 ... P00044 27499202
    329757 5cie:C (2.6) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329758 5cie:C (2.6) BS02 ANL 1.11.1.5 GO:0004601 ... P00431 27499202
    329759 5cie:D (2.6) BS01 HEC ? GO:0005515 ... P00044 27499202
    329760 5cif:A (2.01) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329761 5cif:B (2.01) BS01 HEC ? GO:0005515 ... P00044 27499202
    329762 5cif:C (2.01) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329763 5cif:C (2.01) BS02 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329764 5cif:D (2.01) BS01 HEC ? GO:0005515 ... P00044 27499202
    329765 5cig:A (2.06) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329766 5cig:B (2.06) BS01 HEC ? GO:0005515 ... P00044 27499202
    329767 5cig:C (2.06) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329768 5cig:D (2.06) BS01 HEC ? GO:0005515 ... P00044 27499202
    329769 5cih:A (2.6) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329770 5cih:A (2.6) BS02 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329771 5cih:B (2.6) BS01 HEC ? GO:0005515 ... P00044 27499202
    329772 5cih:C (2.6) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 27499202
    329773 5cih:D (2.6) BS01 HEC ? GO:0005515 ... P00044 27499202
    329774 5cil:H (1.81) BS01 peptide N/A N/A N/A 26378169
    329775 5cil:L (1.81) BS01 peptide N/A N/A N/A 26378169
    329776 5cim:B (3.32) BS01 GLC 2.4.99.16 GO:0004553 ... G7CL00 26616850
    329777 5cim:B (3.32) BS02 GLC 2.4.99.16 GO:0004553 ... G7CL00 26616850
    329778 5cin:H (1.7) BS01 peptide N/A N/A N/A 26378169
    329779 5cin:L (1.7) BS01 peptide N/A N/A N/A 26378169
    329780 5cio:A (2.5) BS01 ZN ? GO:0004222 ... A0A1A9TAI5 27231346
    329781 5cio:B (2.5) BS01 ZN ? GO:0004222 ... A0A1A9TAI5 27231346
    329782 5ciq:A (1.65) BS01 GDP 3.6.5.- GO:0000054 ... P62826 26272610
    329783 5ciq:B (1.65) BS01 GDP 3.6.5.- GO:0000054 ... P62826 26272610
    329784 5cis:A (2.58) BS01 CA 3.4.21.104 GO:0005509 ... Q9JJS8 28111019
    329785 5cis:A (2.58) BS02 CA 3.4.21.104 GO:0005509 ... Q9JJS8 28111019
    329786 5cis:A (2.58) BS03 CA 3.4.21.104 GO:0005509 ... Q9JJS8 28111019
    329787 5cit:A (1.75) BS01 GDP 3.6.5.- GO:0000054 ... P62826 26272610
    329788 5cit:B (1.75) BS01 GDP 3.6.5.- GO:0000054 ... P62826 26272610
    329789 5ciu:A (2.24) BS01 peptide 2.1.1.37 N/A Q9UBC3 26993463
    329790 5ciu:A (2.24) BS02 peptide 2.1.1.37 N/A Q9UBC3 26993463
    329791 5ciu:B (2.24) BS01 peptide 2.1.1.37 N/A Q9UBC3 26993463
    329792 5ciw:A (1.75) BS01 GDP 3.6.5.- GO:0000054 ... P62826 26272610
    329793 5ciw:B (1.75) BS01 GDP 3.6.5.- GO:0000054 ... P62826 26272610
    329794 5cix:A (1.88) BS01 211 3.2.2.22 GO:0000166 ... D9J2T9 N/A
    329795 5ciy:A (1.594) BS01 dna 2.1.1.37 GO:0003677 ... P05102 26993463
    329796 5ciy:A (1.594) BS02 dna 2.1.1.37 GO:0003677 ... P05102 26993463
    329797 5ciy:A (1.594) BS03 SAH 2.1.1.37 GO:0003677 ... P05102 26993463
    329798 5ciz:A (5.0098) BS01 dna ? GO:0003677 ... P0ACJ8 N/A
    329799 5ciz:A (5.0098) BS02 dna ? GO:0003677 ... P0ACJ8 N/A
    329800 5ciz:A (5.0098) BS03 CMP ? GO:0003677 ... P0ACJ8 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).