SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    330001 5clp:A (1.684) BS05 42J 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: IC50=700000nM
    330002 5clp:A (1.684) BS06 42J 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: IC50=700000nM
    330003 5clp:B (1.684) BS01 42J 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: IC50=700000nM
    330004 5clp:B (1.684) BS02 42J 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: IC50=700000nM
    330005 5clp:B (1.684) BS03 42J 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: IC50=700000nM
    330006 5clp:B (1.684) BS04 42J 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: IC50=700000nM
    330007 5clp:B (1.684) BS05 42J 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: IC50=700000nM
    330008 5clq:A (3.2) BS01 GNP 3.6.5.- GO:0000054 ... P62826 26272610
    330009 5clq:A (3.2) BS02 MG 3.6.5.- GO:0000054 ... P62826 26272610
    330010 5clq:C (3.2) BS01 GNP 3.6.5.- GO:0000054 ... P62826 26272610
    330011 5clq:C (3.2) BS02 MG 3.6.5.- GO:0000054 ... P62826 26272610
    330012 5cls:A (1.75) BS01 CO 3.4.11.18 GO:0006508 ... P50579 26686773
    330013 5cls:A (1.75) BS02 52T 3.4.11.18 GO:0006508 ... P50579 26686773
    330014 5clt:A (2.79) BS01 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330015 5clt:A (2.79) BS02 AC1 2.4.1.18 GO:0003824 ... Q04446 N/A
    330016 5clt:B (2.79) BS01 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330017 5clt:B (2.79) BS02 AC1 2.4.1.18 GO:0003824 ... Q04446 N/A
    330018 5clt:C (2.79) BS01 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330019 5clt:C (2.79) BS02 AC1 2.4.1.18 GO:0003824 ... Q04446 N/A
    330020 5clu:A (1.55) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26507456
    330021 5clu:A (1.55) BS02 S8A 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26507456 MOAD: Ki=78uM
    BindingDB: Ki=78000nM
    330022 5clv:A (2.5) BS01 dna ? GO:0003677 ... P03052 27016739
    330023 5clv:A (2.5) BS02 dna ? GO:0003677 ... P03052 27016739
    330024 5clv:B (2.5) BS01 dna ? GO:0003677 ... P03052 27016739
    330025 5clv:B (2.5) BS02 dna ? GO:0003677 ... P03052 27016739
    330026 5clv:E (2.5) BS01 dna ? N/A P03052 27016739
    330027 5clv:E (2.5) BS02 dna ? N/A P03052 27016739
    330028 5clv:E (2.5) BS03 dna ? N/A P03052 27016739
    330029 5clv:F (2.5) BS01 dna ? N/A P03052 27016739
    330030 5clv:F (2.5) BS02 dna ? N/A P03052 27016739
    330031 5clv:I (2.5) BS01 dna ? N/A P03052 27016739
    330032 5clv:I (2.5) BS02 dna ? N/A P03052 27016739
    330033 5clv:J (2.5) BS01 dna ? N/A P03052 27016739
    330034 5clv:J (2.5) BS02 dna ? N/A P03052 27016739
    330035 5clv:M (2.5) BS01 dna ? N/A P03052 27016739
    330036 5clv:M (2.5) BS02 dna ? N/A P03052 27016739
    330037 5clv:N (2.5) BS01 dna ? N/A P03052 27016739
    330038 5clv:N (2.5) BS02 dna ? N/A P03052 27016739
    330039 5clw:A (2.8) BS01 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330040 5clw:A (2.8) BS02 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330041 5clw:A (2.8) BS03 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330042 5clw:A (2.8) BS04 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330043 5clw:A (2.8) BS05 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330044 5clw:A (2.8) BS06 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330045 5clw:B (2.8) BS01 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330046 5clw:B (2.8) BS02 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330047 5clw:B (2.8) BS03 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330048 5clw:B (2.8) BS04 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330049 5clw:C (2.8) BS01 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330050 5clw:C (2.8) BS02 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330051 5clw:C (2.8) BS03 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330052 5clw:C (2.8) BS04 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330053 5clw:C (2.8) BS05 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330054 5clw:C (2.8) BS06 GLC 2.4.1.18 GO:0003824 ... Q04446 N/A
    330055 5cm0:A (1.9) BS01 PLP 2.6.1.42 GO:0003824 ... A0A0A7GJ30 30733943
    330056 5cm0:B (1.9) BS01 PLP 2.6.1.42 GO:0003824 ... A0A0A7GJ30 30733943
    330057 5cm0:C (1.9) BS01 PLP 2.6.1.42 GO:0003824 ... A0A0A7GJ30 30733943
    330058 5cm2:M (2.5) BS01 ZN ? GO:0000470 ... Q6C4P5 26438534
    330059 5cm3:A (2.302) BS01 dna ? GO:0003677 ... P03052 27016739
    330060 5cm3:A (2.302) BS02 dna ? GO:0003677 ... P03052 27016739
    330061 5cm3:B (2.302) BS01 dna ? GO:0003677 ... P03052 27016739
    330062 5cm3:B (2.302) BS02 dna ? GO:0003677 ... P03052 27016739
    330063 5cm6:A (1.83) BS01 PYR N/A GO:0031317 ... N/A N/A
    330064 5cm6:B (1.83) BS01 PYR N/A GO:0031317 ... N/A N/A
    330065 5cm7:A (1.55) BS01 ADP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330066 5cm7:A (1.55) BS02 TPP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330067 5cm7:A (1.55) BS03 CA 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330068 5cm7:A (1.55) BS04 MG 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330069 5cm7:B (1.55) BS01 TPP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330070 5cm7:B (1.55) BS02 CA 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330071 5cm7:B (1.55) BS03 MG 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330072 5cm7:B (1.55) BS04 ADP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    330073 5cmb:A (1.34) BS01 GLY ? GO:0015276 ... A0A0R4I973 27791085 MOAD: Kd=28.3nM
    330074 5cmb:A (1.34) BS02 MG ? GO:0015276 ... A0A0R4I973 27791085
    330075 5cmb:B (1.34) BS01 MG ? GO:0015276 ... A0A0R4I973 27791085
    330076 5cmb:B (1.34) BS02 GLY ? GO:0015276 ... A0A0R4I973 27791085 MOAD: Kd=28.3nM
    330077 5cmc:A (1.28) BS01 GLY ? GO:0015276 ... A0A0R4I973 27791085 MOAD: Kd=2.48uM
    330078 5cmc:A (1.28) BS02 MG ? GO:0015276 ... A0A0R4I973 27791085
    330079 5cmc:B (1.28) BS01 GLY ? GO:0015276 ... A0A0R4I973 27791085 MOAD: Kd=2.48uM
    330080 5cmc:B (1.28) BS02 MG ? GO:0015276 ... A0A0R4I973 27791085
    330081 5cmk:A (1.801) BS01 GLU ? GO:0015276 ... P42260 27580033
    330082 5cmk:B (1.801) BS01 LY5 ? GO:0015276 ... P42260 27580033 MOAD: ic50=30nM
    330083 5cmm:A (1.271) BS01 SYM ? GO:0015276 ... P42260
    Q13002
    27580033
    330084 5cmn:E (3.605) BS01 CA ? N/A Q9HAR2 26235030
    330085 5cmn:F (3.605) BS01 CA ? N/A Q9HAR2 26235030
    330086 5cmn:G (3.605) BS01 CA ? N/A Q9HAR2 26235030
    330087 5cmn:H (3.605) BS01 CA ? N/A Q9HAR2 26235030
    330088 5cmq:A (1.935) BS01 ZN 1.16.3.1 GO:0004322 ... P02794 26305584
    330089 5cmq:A (1.935) BS02 ZN 1.16.3.1 GO:0004322 ... P02794 26305584
    330090 5cmr:A (3.792) BS01 ZN 1.16.3.1 GO:0004322 ... P02794 26305584
    330091 5cms:A (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330092 5cms:B (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330093 5cms:C (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330094 5cms:D (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330095 5cms:E (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330096 5cms:F (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330097 5cms:G (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330098 5cms:H (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330099 5cms:I (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330100 5cms:J (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330101 5cms:K (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330102 5cms:L (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330103 5cms:M (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330104 5cms:N (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330105 5cms:O (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330106 5cms:P (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330107 5cms:Q (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330108 5cms:R (2.98) BS01 APR 3.1.1.106 GO:0001883 ... P0A8D6 26481419
    330109 5cmv:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330110 5cmx:H (2.98) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 26673709
    330111 5cmx:H (2.98) BS02 dna 3.4.21.5 GO:0004252 ... P00734 26673709
    330112 5cmx:H (2.98) BS03 0G6 3.4.21.5 GO:0004252 ... P00734 26673709
    330113 5cn4:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330114 5cn5:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330115 5cn6:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330116 5cn7:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330117 5cn8:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330118 5cn9:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330119 5cna:A (2.0) BS01 MMA ? GO:0030246 ... P02866 15299352
    330120 5cna:A (2.0) BS02 MN ? GO:0030246 ... P02866 15299352
    330121 5cna:A (2.0) BS03 CA ? GO:0030246 ... P02866 15299352
    330122 5cna:B (2.0) BS01 MMA ? GO:0030246 ... P02866 15299352
    330123 5cna:B (2.0) BS02 MN ? GO:0030246 ... P02866 15299352
    330124 5cna:B (2.0) BS03 CA ? GO:0030246 ... P02866 15299352
    330125 5cna:C (2.0) BS01 MMA ? GO:0030246 ... P02866 15299352
    330126 5cna:C (2.0) BS02 MN ? GO:0030246 ... P02866 15299352
    330127 5cna:C (2.0) BS03 CA ? GO:0030246 ... P02866 15299352
    330128 5cna:D (2.0) BS01 MMA ? GO:0030246 ... P02866 15299352
    330129 5cna:D (2.0) BS02 MN ? GO:0030246 ... P02866 15299352
    330130 5cna:D (2.0) BS03 CA ? GO:0030246 ... P02866 15299352
    330131 5cnb:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330132 5cnc:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330133 5cnd:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330134 5cne:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330135 5cnf:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330136 5cng:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 26359336
    330137 5cni:A (2.69) BS01 GLU ? GO:0004930 ... Q14416 26313429
    330138 5cni:B (2.69) BS01 GLU ? GO:0004930 ... Q14416 26313429
    330139 5cnj:A (2.65) BS01 52Q ? GO:0004930 ... Q14416 26313429
    330140 5cnj:B (2.65) BS01 52Q ? GO:0004930 ... Q14416 26313429
    330141 5cnk:A (3.15) BS01 GLU ? GO:0004930 ... Q14832 26313429
    330142 5cnm:A (2.84) BS01 52Q ? GO:0004930 ... Q14832 26313429
    330143 5cnm:A (2.84) BS02 MG ? GO:0004930 ... Q14832 26313429
    330144 5cnn:A (1.9) BS01 ANP 2.7.10.1 GO:0004672 ... P00533 26124280
    330145 5cnn:A (1.9) BS02 MG 2.7.10.1 GO:0004672 ... P00533 26124280
    330146 5cnn:B (1.9) BS01 ANP 2.7.10.1 GO:0004672 ... P00533 26124280
    330147 5cnn:B (1.9) BS02 MG 2.7.10.1 GO:0004672 ... P00533 26124280
    330148 5cno:A (1.55) BS01 peptide 2.7.10.1 GO:0004672 ... P00533 26124280
    330149 5cno:A (1.55) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 26124280
    330150 5cno:A (1.55) BS03 MG 2.7.10.1 GO:0004672 ... P00533 26124280
    330151 5cno:B (1.55) BS01 peptide 2.7.10.1 GO:0004672 ... P00533 26124280
    330152 5cno:B (1.55) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 26124280
    330153 5cno:B (1.55) BS03 MG 2.7.10.1 GO:0004672 ... P00533 26124280
    330154 5cnp:B (2.38) BS01 MG 2.3.1.57 GO:0000287 ... Q9KL03 26410587
    330155 5cnp:D (2.38) BS01 MG 2.3.1.57 GO:0000287 ... Q9KL03 26410587
    330156 5cnp:F (2.38) BS01 MG 2.3.1.57 GO:0000287 ... Q9KL03 26410587
    330157 5cnq:A (2.602) BS01 dna ? GO:0004518 ... G0RYN2 26686639
    330158 5cnq:A (2.602) BS02 dna ? GO:0004518 ... G0RYN2 26686639
    330159 5cnq:A (2.602) BS03 MN ? GO:0004518 ... G0RYN2 26686639
    330160 5cns:A (2.975) BS01 CDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330161 5cns:A (2.975) BS02 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330162 5cns:A (2.975) BS03 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330163 5cns:A (2.975) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330164 5cns:B (2.975) BS01 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330165 5cns:B (2.975) BS02 CDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330166 5cns:B (2.975) BS03 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330167 5cns:B (2.975) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330168 5cns:C (2.975) BS01 CDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330169 5cns:C (2.975) BS02 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330170 5cns:C (2.975) BS03 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330171 5cns:C (2.975) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330172 5cns:D (2.975) BS01 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330173 5cns:D (2.975) BS02 CDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330174 5cns:D (2.975) BS03 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330175 5cns:D (2.975) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330176 5cns:E (2.975) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330177 5cns:F (2.975) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330178 5cns:G (2.975) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330179 5cns:H (2.975) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330180 5cnt:A (3.25) BS01 UDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330181 5cnt:A (3.25) BS02 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330182 5cnt:A (3.25) BS03 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330183 5cnt:A (3.25) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330184 5cnt:A (3.25) BS05 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330185 5cnt:B (3.25) BS01 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330186 5cnt:B (3.25) BS02 UDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330187 5cnt:B (3.25) BS03 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330188 5cnt:B (3.25) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330189 5cnt:B (3.25) BS05 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330190 5cnt:C (3.25) BS01 UDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330191 5cnt:C (3.25) BS02 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330192 5cnt:C (3.25) BS03 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330193 5cnt:C (3.25) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330194 5cnt:C (3.25) BS05 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330195 5cnt:D (3.25) BS01 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330196 5cnt:D (3.25) BS02 UDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330197 5cnt:D (3.25) BS03 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330198 5cnt:D (3.25) BS04 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330199 5cnt:D (3.25) BS05 DTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330200 5cnt:E (3.25) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).