SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    330201 5cnt:F (3.25) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330202 5cnt:G (3.25) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330203 5cnt:H (3.25) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330204 5cnu:A (3.4) BS01 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330205 5cnu:A (3.4) BS02 ADP 1.17.4.1 GO:0004748 ... P00452 26754917
    330206 5cnu:A (3.4) BS03 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330207 5cnu:A (3.4) BS04 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330208 5cnu:B (3.4) BS01 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330209 5cnu:B (3.4) BS02 ADP 1.17.4.1 GO:0004748 ... P00452 26754917
    330210 5cnu:B (3.4) BS03 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330211 5cnu:B (3.4) BS04 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330212 5cnu:C (3.4) BS01 ADP 1.17.4.1 GO:0004748 ... P00452 26754917
    330213 5cnu:C (3.4) BS02 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330214 5cnu:C (3.4) BS03 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330215 5cnu:C (3.4) BS04 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330216 5cnu:D (3.4) BS01 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330217 5cnu:D (3.4) BS02 ADP 1.17.4.1 GO:0004748 ... P00452 26754917
    330218 5cnu:D (3.4) BS03 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330219 5cnu:D (3.4) BS04 DGT 1.17.4.1 GO:0004748 ... P00452 26754917
    330220 5cnu:E (3.4) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330221 5cnu:F (3.4) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330222 5cnu:G (3.4) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330223 5cnu:H (3.4) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330224 5cnv:A (3.2) BS01 GDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330225 5cnv:A (3.2) BS02 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330226 5cnv:A (3.2) BS03 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330227 5cnv:A (3.2) BS04 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330228 5cnv:A (3.2) BS05 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330229 5cnv:B (3.2) BS01 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330230 5cnv:B (3.2) BS02 GDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330231 5cnv:B (3.2) BS03 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330232 5cnv:B (3.2) BS04 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330233 5cnv:B (3.2) BS05 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330234 5cnv:C (3.2) BS01 GDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330235 5cnv:C (3.2) BS02 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330236 5cnv:C (3.2) BS03 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330237 5cnv:C (3.2) BS04 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330238 5cnv:C (3.2) BS05 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330239 5cnv:D (3.2) BS01 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330240 5cnv:D (3.2) BS02 GDP 1.17.4.1 GO:0004748 ... P00452 26754917
    330241 5cnv:D (3.2) BS03 DAT 1.17.4.1 GO:0004748 ... P00452 26754917
    330242 5cnv:D (3.2) BS04 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330243 5cnv:D (3.2) BS05 TTP 1.17.4.1 GO:0004748 ... P00452 26754917
    330244 5cnv:E (3.2) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330245 5cnv:F (3.2) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330246 5cnv:G (3.2) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330247 5cnv:H (3.2) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 26754917
    330248 5cnx:A (2.6) BS01 ZN 3.4.11.- GO:0004177 ... P76524 30536999
    330249 5cnx:A (2.6) BS02 ZN 3.4.11.- GO:0004177 ... P76524 30536999
    330250 5cnx:B (2.6) BS01 ZN 3.4.11.- GO:0004177 ... P76524 30536999
    330251 5cnx:B (2.6) BS02 ZN 3.4.11.- GO:0004177 ... P76524 30536999
    330252 5cnx:C (2.6) BS01 ZN 3.4.11.- GO:0004177 ... P76524 30536999
    330253 5cnx:C (2.6) BS02 ZN 3.4.11.- GO:0004177 ... P76524 30536999
    330254 5cny:B (1.7) BS01 peptide ? GO:0005179 ... P01308 N/A
    330255 5cny:D (1.7) BS01 peptide ? GO:0005179 ... P01308 N/A
    330256 5co0:O (2.65) BS01 dna ? GO:0003690 ... Q99551 26523681
    330257 5co0:O (2.65) BS02 dna ? GO:0003690 ... Q99551 26523681
    330258 5co1:A (2.51) BS01 CA ? GO:0005509 ... F8W3X3 27787195
    330259 5co1:A (2.51) BS02 CA ? GO:0005509 ... F8W3X3 27787195
    330260 5co1:A (2.51) BS03 CA ? GO:0005509 ... F8W3X3 27787195
    330261 5co1:A (2.51) BS04 CA ? GO:0005509 ... F8W3X3 27787195
    330262 5co1:B (2.51) BS01 CA ? GO:0005509 ... F8W3X3 27787195
    330263 5co1:B (2.51) BS02 CA ? GO:0005509 ... F8W3X3 27787195
    330264 5co1:B (2.51) BS03 CA ? GO:0005509 ... F8W3X3 27787195
    330265 5co1:B (2.51) BS04 CA ? GO:0005509 ... F8W3X3 27787195
    330266 5co1:C (2.51) BS01 CA ? GO:0005509 ... F8W3X3 27787195
    330267 5co1:C (2.51) BS02 CA ? GO:0005509 ... F8W3X3 27787195
    330268 5co1:C (2.51) BS03 CA ? GO:0005509 ... F8W3X3 27787195
    330269 5co1:C (2.51) BS04 CA ? GO:0005509 ... F8W3X3 27787195
    330270 5co1:D (2.51) BS01 CA ? GO:0005509 ... F8W3X3 27787195
    330271 5co1:D (2.51) BS02 CA ? GO:0005509 ... F8W3X3 27787195
    330272 5co1:D (2.51) BS03 CA ? GO:0005509 ... F8W3X3 27787195
    330273 5co1:D (2.51) BS04 CA ? GO:0005509 ... F8W3X3 27787195
    330274 5co2:B (1.7) BS01 peptide ? GO:0005179 ... P01308 N/A
    330275 5co2:D (1.7) BS01 peptide ? GO:0005179 ... P01308 N/A
    330276 5co4:A (1.7) BS01 MTA 2.1.1.207 GO:0001510 ... Q72G96 N/A
    330277 5co4:B (1.7) BS01 MTA 2.1.1.207 GO:0001510 ... Q72G96 N/A
    330278 5co5:A (2.1) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    330279 5co5:A (2.1) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    330280 5co5:B (2.1) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    330281 5co5:B (2.1) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    330282 5co5:D (2.1) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    330283 5co5:D (2.1) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    330284 5co5:G (2.1) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    330285 5co5:G (2.1) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    330286 5co5:I (2.1) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    330287 5co5:I (2.1) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    330288 5co6:B (1.8) BS01 peptide ? GO:0005179 ... P01308 N/A
    330289 5co6:D (1.8) BS01 peptide ? GO:0005179 ... P01308 N/A
    330290 5co8:A (2.4) BS01 dna ? GO:0004518 ... G0RYN2 26686639
    330291 5co8:A (2.4) BS02 dna ? GO:0004518 ... G0RYN2 26686639
    330292 5co8:A (2.4) BS03 dna ? GO:0004518 ... G0RYN2 26686639
    330293 5co8:A (2.4) BS04 MG ? GO:0004518 ... G0RYN2 26686639
    330294 5co8:C (2.4) BS01 dna ? GO:0004518 ... G0RYN2 26686639
    330295 5co8:C (2.4) BS02 dna ? GO:0004518 ... G0RYN2 26686639
    330296 5co8:C (2.4) BS03 MG ? GO:0004518 ... G0RYN2 26686639
    330297 5co9:B (1.92) BS01 peptide ? GO:0005179 ... P01308 N/A
    330298 5co9:D (1.92) BS01 peptide ? GO:0005179 ... P01308 N/A
    330299 5cob:A (2.65) BS01 NAP 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330300 5cob:A (2.65) BS02 XOG 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330301 5cob:B (2.65) BS01 NAP 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330302 5cob:B (2.65) BS02 XOG 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330303 5cob:C (2.65) BS01 NAP 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330304 5cob:C (2.65) BS02 XOG 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330305 5cob:D (2.65) BS01 NAP 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330306 5cob:D (2.65) BS02 XOG 1.3.1.122 GO:0005737 ... K7WDL7 26868105
    330307 5coc:A (2.6691) BS01 CA ? GO:0005509 ... P0DP23
    P38507
    26980593
    330308 5coc:A (2.6691) BS02 CA ? GO:0005509 ... P0DP23
    P38507
    26980593
    330309 5cof:A (1.35) BS01 CA ? GO:0046872 ... Q1R1X2 26804569
    330310 5cof:A (1.35) BS02 CA ? GO:0046872 ... Q1R1X2 26804569
    330311 5coi:A (1.62) BS01 55K ? N/A O60885 26731490 MOAD: ic50=2.58uM
    BindingDB: IC50=2580nM
    330312 5coj:A (1.9) BS01 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330313 5coj:A (1.9) BS02 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330314 5coj:A (1.9) BS03 MG 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330315 5coj:B (1.9) BS01 MG 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330316 5coj:B (1.9) BS02 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330317 5coj:C (1.9) BS01 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330318 5coj:C (1.9) BS02 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330319 5coj:C (1.9) BS03 MG 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330320 5coj:E (1.9) BS01 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330321 5coj:E (1.9) BS02 MG 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330322 5coj:F (1.9) BS01 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330323 5coj:H (1.9) BS01 TZE 2.7.1.50 GO:0000287 ... Q6GEY3 26960569
    330324 5cok:A (1.801) BS01 52U ? GO:0004190 ... G0X8E8 26581995
    330325 5cok:B (1.801) BS01 52U ? GO:0004190 ... G0X8E8 26581995
    330326 5con:A (1.8) BS01 52W ? GO:0004190 ... G0X8E8 26581995
    330327 5con:B (1.8) BS01 52W ? GO:0004190 ... G0X8E8 26581995
    330328 5coo:A (1.8) BS01 52Z ? GO:0004190 ... G0X8E8 26581995
    330329 5coo:B (1.8) BS01 52Z ? GO:0004190 ... G0X8E8 26581995
    330330 5cop:A (2.0) BS01 53F ? GO:0004190 ... G0X8E8 26581995
    330331 5cop:B (2.0) BS01 53F ? GO:0004190 ... G0X8E8 26581995
    330332 5coq:A (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330333 5coq:A (2.3) BS02 TCU 1.3.1.9 GO:0004318 ... P9WGR1 26147157 MOAD: Ki=427.5nM
    BindingDB: Ki=913nM, IC50=51nM
    330334 5coq:B (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330335 5coq:B (2.3) BS02 TCU 1.3.1.9 GO:0004318 ... P9WGR1 26147157 MOAD: Ki=427.5nM
    BindingDB: Ki=913nM, IC50=51nM
    330336 5coq:C (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330337 5coq:C (2.3) BS02 TCU 1.3.1.9 GO:0004318 ... P9WGR1 26147157 MOAD: Ki=427.5nM
    BindingDB: Ki=913nM, IC50=51nM
    330338 5coq:D (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330339 5coq:D (2.3) BS02 TCU 1.3.1.9 GO:0004318 ... P9WGR1 26147157 MOAD: Ki=427.5nM
    BindingDB: Ki=913nM, IC50=51nM
    330340 5cot:A (1.69) BS01 AMP ? GO:0005524 ... D2W2Z5 26512110
    330341 5cou:A (1.9) BS01 ATP ? GO:0005524 ... D2W2Z5 26512110
    330342 5cox:A (3.0) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 8967954
    330343 5cox:B (3.0) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 8967954
    330344 5cox:C (3.0) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 8967954
    330345 5cox:D (3.0) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 8967954
    330346 5coy:A (1.443) BS01 GLC ? GO:0002407 ... P13501 27091995
    330347 5coy:A (1.443) BS02 Z9N ? GO:0002407 ... P13501 27091995
    330348 5cp0:A (2.0) BS01 peptide 3.5.1.88 GO:0042586 ... Q5H3Z2 N/A
    330349 5cp2:B (2.36) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    330350 5cp2:B (2.36) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 26836966
    330351 5cp3:A (1.99) BS01 YTZ N/A N/A N/A 30580515
    330352 5cp3:A (1.99) BS02 CA N/A N/A N/A 30580515
    330353 5cp3:H (1.99) BS01 YTZ N/A N/A N/A 30580515
    330354 5cp4:A (1.75) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 9649301
    330355 5cp4:A (1.75) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 9649301
    330356 5cp5:A (1.79) BS01 EB0 ? N/A O60885 26731490 MOAD: Kd=1.234uM
    BindingDB: IC50=1530nM, Kd=1234nM
    330357 5cp6:A (2.6) BS01 dna ? GO:0000786 ... P84233 27184539
    330358 5cp6:A (2.6) BS02 dna ? GO:0000786 ... P84233 27184539
    330359 5cp6:B (2.6) BS01 dna ? GO:0000786 ... P62799 27184539
    330360 5cp6:B (2.6) BS02 dna ? GO:0000786 ... P62799 27184539
    330361 5cp6:C (2.6) BS01 dna ? GO:0000786 ... P06897 27184539
    330362 5cp6:C (2.6) BS02 dna ? GO:0000786 ... P06897 27184539
    330363 5cp6:D (2.6) BS01 dna ? GO:0000786 ... P02281 27184539
    330364 5cp6:D (2.6) BS02 dna ? GO:0000786 ... P02281 27184539
    330365 5cp6:E (2.6) BS01 dna ? GO:0000786 ... P84233 27184539
    330366 5cp6:E (2.6) BS02 dna ? GO:0000786 ... P84233 27184539
    330367 5cp6:F (2.6) BS01 dna ? GO:0000786 ... P62799 27184539
    330368 5cp6:F (2.6) BS02 dna ? GO:0000786 ... P62799 27184539
    330369 5cp6:G (2.6) BS01 dna ? GO:0000786 ... P06897 27184539
    330370 5cp6:G (2.6) BS02 dna ? GO:0000786 ... P06897 27184539
    330371 5cp6:H (2.6) BS01 dna ? GO:0000786 ... P02281 27184539
    330372 5cp6:H (2.6) BS02 dna ? GO:0000786 ... P02281 27184539
    330373 5cp8:A (2.4) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330374 5cp8:A (2.4) BS02 TCU 1.3.1.9 GO:0004318 ... P9WGR1 26147157 MOAD: Ki=1570.6nM
    BindingDB: Ki=913nM, IC50=51nM
    330375 5cp9:B (1.9) BS01 6O5 ? N/A P14210 30090230
    330376 5cpa:A (1.54) BS01 ZN 3.4.17.1 GO:0004181 ... P00730 6887246
    330377 5cpb:A (1.997) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330378 5cpb:B (1.997) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330379 5cpb:C (1.997) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330380 5cpb:D (1.997) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330381 5cpb:E (1.997) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330382 5cpb:F (1.997) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 26147157
    330383 5cpd:A (2.2) BS01 MET 3.5.1.88 GO:0042586 ... Q5H3Z2 N/A
    330384 5cpd:A (2.2) BS02 ALA 3.5.1.88 GO:0042586 ... Q5H3Z2 N/A
    330385 5cpe:A (1.62) BS01 EB2 ? N/A O60885 26731490 MOAD: ic50=0.45uM
    BindingDB: IC50=450nM
    330386 5cpf:A (3.409) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330387 5cpf:A (3.409) BS02 53K 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330388 5cpf:B (3.409) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330389 5cpf:B (3.409) BS02 53K 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330390 5cpf:C (3.409) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330391 5cpf:C (3.409) BS02 53K 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330392 5cpf:D (3.409) BS01 53K 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330393 5cpf:D (3.409) BS02 NAD 1.3.1.9 GO:0004318 ... P9WGR0 26147157
    330394 5cph:A (1.2) BS01 EVO 5.6.2.2 GO:0003677 ... P0A0K8 26786695 BindingDB: IC50=840000nM
    330395 5cph:B (1.2) BS01 EVO 5.6.2.2 GO:0003677 ... P0A0K8 26786695 BindingDB: IC50=840000nM
    330396 5cpi:A (2.902) BS01 dna ? GO:0000786 ... P68431 26446621
    330397 5cpi:A (2.902) BS02 dna ? GO:0000786 ... P68431 26446621
    330398 5cpi:B (2.902) BS01 dna ? GO:0000781 ... P62805 26446621
    330399 5cpi:B (2.902) BS02 dna ? GO:0000781 ... P62805 26446621
    330400 5cpi:C (2.902) BS01 dna ? GO:0000786 ... P04908 26446621

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).