SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    330601 5cr9:A (1.7) BS01 GLU ? GO:0046872 ... C7MWN7 N/A
    330602 5cra:A (2.64) BS01 GVE ? GO:0016579 ... Q6RCR0 26598703
    330603 5cra:B (2.64) BS01 GVE ? GO:0016579 ... Q6RCR0 26598703
    330604 5crd:A (2.08) BS01 CA ? GO:0005509 ... P31415 26416891
    330605 5crd:A (2.08) BS02 CA ? GO:0005509 ... P31415 26416891
    330606 5crd:A (2.08) BS03 CA ? GO:0005509 ... P31415 26416891
    330607 5cre:A (3.315) BS01 CA ? GO:0005509 ... P31415 26416891
    330608 5cre:A (3.315) BS02 CA ? GO:0005509 ... P31415 26416891
    330609 5crg:A (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    330610 5crg:A (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    330611 5crg:A (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    330612 5crg:A (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    330613 5crg:A (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    330614 5crg:A (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    330615 5crg:A (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    330616 5crg:A (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    330617 5crg:A (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    330618 5crg:A (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    330619 5crg:A (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    330620 5crg:A (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    330621 5crg:A (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    330622 5crg:B (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    330623 5crg:B (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    330624 5crg:B (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    330625 5crg:B (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    330626 5crg:B (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    330627 5crg:B (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    330628 5crg:B (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    330629 5crg:B (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    330630 5crg:B (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    330631 5crg:B (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    330632 5crg:B (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    330633 5crg:B (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    330634 5crg:B (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    330635 5crg:B (1.97) BS14 CA ? GO:0005509 ... P31415 26416891
    330636 5crg:C (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    330637 5crg:C (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    330638 5crg:C (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    330639 5crg:C (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    330640 5crg:C (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    330641 5crg:C (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    330642 5crg:C (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    330643 5crg:C (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    330644 5crg:C (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    330645 5crg:C (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    330646 5crg:C (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    330647 5crg:C (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    330648 5crg:C (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    330649 5crg:D (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    330650 5crg:D (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    330651 5crg:D (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    330652 5crg:D (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    330653 5crg:D (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    330654 5crg:D (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    330655 5crg:D (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    330656 5crg:D (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    330657 5crg:D (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    330658 5crg:D (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    330659 5crg:D (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    330660 5crg:D (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    330661 5crg:D (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    330662 5crg:D (1.97) BS14 CA ? GO:0005509 ... P31415 26416891
    330663 5crh:A (2.03) BS01 CA ? GO:0005509 ... P31415 26416891
    330664 5crh:A (2.03) BS02 CA ? GO:0005509 ... P31415 26416891
    330665 5crh:A (2.03) BS03 CA ? GO:0005509 ... P31415 26416891
    330666 5crh:A (2.03) BS04 CA ? GO:0005509 ... P31415 26416891
    330667 5crh:A (2.03) BS05 CA ? GO:0005509 ... P31415 26416891
    330668 5crh:A (2.03) BS06 CA ? GO:0005509 ... P31415 26416891
    330669 5crh:A (2.03) BS07 CA ? GO:0005509 ... P31415 26416891
    330670 5crh:A (2.03) BS08 CA ? GO:0005509 ... P31415 26416891
    330671 5crh:B (2.03) BS01 CA ? GO:0005509 ... P31415 26416891
    330672 5crh:B (2.03) BS02 CA ? GO:0005509 ... P31415 26416891
    330673 5crh:B (2.03) BS03 CA ? GO:0005509 ... P31415 26416891
    330674 5crh:B (2.03) BS04 CA ? GO:0005509 ... P31415 26416891
    330675 5crh:B (2.03) BS05 CA ? GO:0005509 ... P31415 26416891
    330676 5crh:B (2.03) BS06 CA ? GO:0005509 ... P31415 26416891
    330677 5crh:B (2.03) BS07 CA ? GO:0005509 ... P31415 26416891
    330678 5crh:B (2.03) BS08 CA ? GO:0005509 ... P31415 26416891
    330679 5crj:O (2.59) BS01 dna ? GO:0003690 ... Q99551 26523681
    330680 5crj:O (2.59) BS02 dna ? GO:0003690 ... Q99551 26523681
    330681 5crk:O (2.48) BS01 dna ? GO:0003690 ... Q99551 26523681
    330682 5crk:O (2.48) BS02 dna ? GO:0003690 ... Q99551 26523681
    330683 5crl:B (2.8) BS01 HG ? GO:0003677 ... P0A183 27641146
    330684 5crm:A (1.99) BS01 EB5 ? N/A O60885 26731490 MOAD: ic50=1.09uM
    BindingDB: IC50=1090nM
    330685 5crv:A (2.001) BS01 peptide 3.1.3.48 N/A Q9H3S7 26866605
    330686 5crv:B (2.001) BS01 peptide 3.1.3.48 N/A Q9H3S7 26866605
    330687 5crw:A (1.6) BS01 peptide 5.3.4.1 GO:0003756 ... P55059 26350503
    330688 5crx:A (2.7) BS01 dna ? GO:0003677 ... P06956 10377382
    330689 5crx:A (2.7) BS02 dna ? GO:0003677 ... P06956 10377382
    330690 5crx:B (2.7) BS01 dna ? GO:0003677 ... P06956 10377382
    330691 5crx:B (2.7) BS02 dna ? GO:0003677 ... P06956 10377382
    330692 5cry:A (2.79) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    330693 5cry:A (2.79) BS02 BCT 3.4.21.- GO:0005576 ... P24627 N/A
    330694 5cry:B (2.79) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    330695 5cry:B (2.79) BS02 BCT 3.4.21.- GO:0005576 ... P24627 N/A
    330696 5crz:A (2.12) BS01 EB7 ? N/A O60885 26731490 MOAD: ic50=0.45uM
    BindingDB: IC50=450nM
    330697 5cs2:A (1.65) BS01 peptide 3.6.1.29 GO:0000166 ... Q8IL97 26472355
    330698 5cs3:B (2.5) BS01 EP1 ? N/A P14210 30090230
    330699 5cs5:B (1.9) BS01 PIN ? N/A P14210 30090230
    330700 5cs6:A (1.88) BS01 K82 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=630uM
    BindingDB: IC50=3000000nM
    330701 5cs6:A (1.88) BS02 K82 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=630uM
    BindingDB: IC50=3000000nM
    330702 5cs6:A (1.88) BS03 K82 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=630uM
    BindingDB: IC50=3000000nM
    330703 5cs6:A (1.88) BS04 K82 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=630uM
    BindingDB: IC50=3000000nM
    330704 5cs8:A (1.62) BS01 EB8 ? N/A O60885 26731490 MOAD: ic50=2.29uM
    BindingDB: IC50=2290nM
    330705 5csd:A (1.45) BS01 ACD ? N/A A0A093VKV7 28111099 MOAD: Kd=0.000000064M
    330706 5csd:A (1.45) BS02 ACD ? N/A A0A093VKV7 28111099 MOAD: Kd=0.000000064M
    330707 5csd:B (1.45) BS01 ACD ? N/A A0A093VKV7 28111099 MOAD: Kd=0.000000064M
    330708 5csd:B (1.45) BS02 ACD ? N/A A0A093VKV7 28111099 MOAD: Kd=0.000000064M
    330709 5csd:C (1.45) BS01 ACD ? N/A A0A093VKV7 28111099 MOAD: Kd=0.000000064M
    330710 5csd:D (1.45) BS01 ACD ? N/A A0A093VKV7 28111099 MOAD: Kd=0.000000064M
    330711 5cse:A (1.792) BS01 SVP ? GO:0009374 ... P22629 29896353
    330712 5cse:B (1.792) BS01 SVP ? GO:0009374 ... P22629 29896353
    330713 5csf:A (2.4) BS01 peptide ? GO:0001726 ... P04271 26527685
    330714 5csf:A (2.4) BS02 CA ? GO:0001726 ... P04271 26527685
    330715 5csf:A (2.4) BS03 CA ? GO:0001726 ... P04271 26527685
    330716 5csf:B (2.4) BS01 peptide ? GO:0001726 ... P04271 26527685
    330717 5csf:B (2.4) BS02 CA ? GO:0001726 ... P04271 26527685
    330718 5csf:B (2.4) BS03 CA ? GO:0001726 ... P04271 26527685
    330719 5csh:A (1.59) BS01 54E 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=270uM
    BindingDB: IC50=500000nM
    330720 5csh:A (1.59) BS02 54E 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=270uM
    BindingDB: IC50=500000nM
    330721 5csh:A (1.59) BS03 ATP 2.7.11.1 GO:0004672 ... P68400 28451126
    330722 5csh:B (1.59) BS01 54E 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=270uM
    BindingDB: IC50=500000nM
    330723 5csh:B (1.59) BS02 54E 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=270uM
    BindingDB: IC50=500000nM
    330724 5csh:B (1.59) BS03 ATP 2.7.11.1 GO:0004672 ... P68400 28451126
    330725 5csi:A (2.13) BS01 peptide ? GO:0001726 ... P04271 26527685
    330726 5csi:A (2.13) BS02 CA ? GO:0001726 ... P04271 26527685
    330727 5csi:A (2.13) BS03 CA ? GO:0001726 ... P04271 26527685
    330728 5csi:B (2.13) BS01 peptide ? GO:0001726 ... P04271 26527685
    330729 5csi:B (2.13) BS02 CA ? GO:0001726 ... P04271 26527685
    330730 5csi:B (2.13) BS03 CA ? GO:0001726 ... P04271 26527685
    330731 5csj:A (2.7) BS01 peptide ? GO:0001726 ... P04271 26527685
    330732 5csj:A (2.7) BS02 CA ? GO:0001726 ... P04271 26527685
    330733 5csj:A (2.7) BS03 CA ? GO:0001726 ... P04271 26527685
    330734 5csj:B (2.7) BS01 peptide ? GO:0001726 ... P04271 26527685
    330735 5csj:B (2.7) BS02 CA ? GO:0001726 ... P04271 26527685
    330736 5csj:B (2.7) BS03 CA ? GO:0001726 ... P04271 26527685
    330737 5csl:A (3.2) BS01 BTI 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 26458104
    330738 5csl:A (3.2) BS02 COA 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 26458104
    330739 5csl:B (3.2) BS01 BTI 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 26458104
    330740 5csl:B (3.2) BS02 COA 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 26458104
    330741 5csm:A (2.0) BS01 TRP 5.4.99.5 GO:0004106 ... P32178 9384560
    330742 5csn:A (2.95) BS01 peptide ? GO:0001726 ... P04271 26527685
    330743 5csn:A (2.95) BS02 CA ? GO:0001726 ... P04271 26527685
    330744 5csn:A (2.95) BS03 CA ? GO:0001726 ... P04271 26527685
    330745 5csn:B (2.95) BS01 peptide ? GO:0001726 ... P04271 26527685
    330746 5csn:B (2.95) BS02 CA ? GO:0001726 ... P04271 26527685
    330747 5csn:B (2.95) BS03 CA ? GO:0001726 ... P04271 26527685
    330748 5cso:A (1.78) BS01 CTN 3.2.2.22 GO:0000166 ... D9J2T9 29124196
    330749 5csp:A (1.5) BS01 54G 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=58uM
    BindingDB: Kd=58000nM
    330750 5csr:A (1.94) BS01 GOL 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330751 5csr:B (1.94) BS01 GOL 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330752 5csr:C (1.94) BS01 GOL 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330753 5csr:D (1.94) BS01 GOL 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330754 5css:A (2.17) BS01 G3P 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330755 5css:B (2.17) BS01 G3P 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330756 5css:C (2.17) BS01 G3P 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330757 5css:D (2.17) BS01 G3P 5.3.1.1 GO:0004807 ... Q9HLB6 26709515
    330758 5cst:A (1.78) BS01 CDP 3.2.2.22 GO:0000166 ... D9J2T9 29124196
    330759 5csu:A (2.53) BS01 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330760 5csu:A (2.53) BS02 AGL 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330761 5csu:A (2.53) BS03 BGC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330762 5csu:A (2.53) BS04 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330763 5csu:A (2.53) BS05 AGL 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330764 5csu:A (2.53) BS06 HMC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330765 5csu:B (2.53) BS01 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330766 5csu:B (2.53) BS02 AGL 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330767 5csu:B (2.53) BS03 BGC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330768 5csu:B (2.53) BS04 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330769 5csu:B (2.53) BS05 AGL 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330770 5csu:B (2.53) BS06 HMC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330771 5csv:A (1.375) BS01 GAB 2.7.11.1 GO:0004672 ... P68400 28451126 BindingDB: Kd=>500000nM
    330772 5csw:A (2.66) BS01 P06 2.7.11.1 GO:0004672 ... P15056 26916115 BindingDB: IC50=1.000000nM, EC50=529nM
    330773 5csw:B (2.66) BS01 P06 2.7.11.1 GO:0004672 ... P15056 26916115 BindingDB: IC50=1.000000nM, EC50=529nM
    330774 5csx:A (2.51) BS01 54J 2.7.11.1 GO:0004672 ... P15056 26916115 BindingDB: IC50=0.400000nM, Kd=0.330000nM
    330775 5csx:A (2.51) BS02 GLC 2.7.11.1 GO:0004672 ... P15056 26916115
    330776 5csy:A (2.05) BS01 BGC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330777 5csy:A (2.05) BS02 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330778 5csy:A (2.05) BS03 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330779 5csy:A (2.05) BS04 BGC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330780 5csy:A (2.05) BS05 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330781 5csy:B (2.05) BS01 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330782 5csy:B (2.05) BS02 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330783 5csy:B (2.05) BS03 AC1 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330784 5csy:B (2.05) BS04 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330785 5csy:B (2.05) BS05 GLC 2.4.1.25 GO:0000025 ... Q9LV91 26504082
    330786 5csz:A (1.8) BS01 peptide N/A N/A N/A 21955818
    330787 5csz:B (1.8) BS01 peptide N/A N/A N/A 21955818
    330788 5csz:H (1.8) BS01 peptide N/A N/A N/A 21955818
    330789 5csz:L (1.8) BS01 peptide N/A N/A N/A 21955818
    330790 5ct0:A (2.008) BS01 54P 2.7.11.1 GO:0004672 ... P68400 28495381
    330791 5ct0:B (2.008) BS01 54P 2.7.11.1 GO:0004672 ... P68400 28495381
    330792 5ct3:B (2.0) BS01 54O ? N/A P14210 30090230
    330793 5ct4:A (1.49) BS01 BM0 3.1.1.3 GO:0004806 ... P37957 26388426
    330794 5ct4:A (1.49) BS02 CL 3.1.1.3 GO:0004806 ... P37957 26388426
    330795 5ct5:A (1.747) BS01 CL 3.1.1.3 GO:0004806 ... P37957 26388426
    330796 5ct6:A (1.902) BS01 CL 3.1.1.3 GO:0004806 ... P37957 26388426
    330797 5ct6:A (1.902) BS02 BM0 3.1.1.3 GO:0004806 ... P37957 26388426
    330798 5ct6:A (1.902) BS03 BM0 3.1.1.3 GO:0004806 ... P37957 26388426
    330799 5ct6:A (1.902) BS04 BM0 3.1.1.3 GO:0004806 ... P37957 26388426
    330800 5ct6:A (1.902) BS05 BM0 3.1.1.3 GO:0004806 ... P37957 26388426

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).