SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    333201 5da5:G (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333202 5da5:G (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333203 5da5:H (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333204 5da5:H (2.064) BS02 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333205 5da5:H (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333206 5da5:I (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333207 5da5:I (2.064) BS02 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333208 5da5:J (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333209 5da5:J (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333210 5da5:J (2.064) BS03 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333211 5da5:K (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333212 5da5:K (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333213 5da5:K (2.064) BS03 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333214 5da5:L (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333215 5da5:L (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333216 5da5:L (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333217 5da5:L (2.064) BS04 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333218 5da5:M (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333219 5da5:M (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333220 5da5:M (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333221 5da5:M (2.064) BS04 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333222 5da5:N (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333223 5da5:N (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333224 5da5:N (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333225 5da5:O (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333226 5da5:O (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333227 5da5:O (2.064) BS03 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333228 5da5:P (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333229 5da5:P (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333230 5da5:P (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333231 5da5:Q (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333232 5da5:Q (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333233 5da5:Q (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333234 5da5:R (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333235 5da5:R (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333236 5da5:R (2.064) BS03 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333237 5da5:S (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333238 5da5:S (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333239 5da5:S (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333240 5da5:T (2.064) BS01 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333241 5da5:T (2.064) BS02 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333242 5da5:T (2.064) BS03 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333243 5da5:U (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333244 5da5:U (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333245 5da5:U (2.064) BS03 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333246 5da5:V (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333247 5da5:V (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333248 5da5:V (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333249 5da5:W (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333250 5da5:W (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333251 5da5:W (2.064) BS03 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333252 5da5:X (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333253 5da5:X (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333254 5da5:X (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333255 5da5:Y (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333256 5da5:Y (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333257 5da5:Y (2.064) BS03 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333258 5da5:Z (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333259 5da5:Z (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333260 5da5:Z (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333261 5da5:a (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333262 5da5:a (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333263 5da5:a (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333264 5da5:b (2.064) BS01 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333265 5da5:b (2.064) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333266 5da5:b (2.064) BS03 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333267 5da5:c (2.064) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333268 5da5:c (2.064) BS02 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333269 5da5:c (2.064) BS03 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333270 5da5:d (2.064) BS01 CA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333271 5da5:d (2.064) BS02 FE 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333272 5da5:d (2.064) BS03 GOA 1.16.3.1 GO:0004322 ... Q2RVS1 27529188
    333273 5da8:M (3.0) BS01 MG 5.6.1.7 GO:0005524 ... Q8KF02 N/A
    333274 5da8:Q (3.0) BS01 MG 5.6.1.7 GO:0005524 ... Q8KF02 N/A
    333275 5da8:V (3.0) BS01 MG 5.6.1.7 GO:0005524 ... Q8KF02 N/A
    333276 5da9:A (3.0) BS01 MG 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333277 5da9:A (3.0) BS02 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333278 5da9:A (3.0) BS03 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333279 5da9:B (3.0) BS01 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333280 5da9:B (3.0) BS02 MG 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333281 5da9:B (3.0) BS03 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333282 5daa:A (2.9) BS01 PLP 2.6.1.21 GO:0003824 ... P19938 9930994
    333283 5daa:B (2.9) BS01 PLP 2.6.1.21 GO:0003824 ... P19938 9930994
    333284 5dab:A (2.1) BS01 FE2 1.14.11.-
    1.14.11.53
    GO:0001659 ... Q9C0B1 N/A
    333285 5dab:A (2.1) BS02 AKG 1.14.11.-
    1.14.11.53
    GO:0001659 ... Q9C0B1 N/A
    333286 5dab:A (2.1) BS03 58W 1.14.11.-
    1.14.11.53
    GO:0001659 ... Q9C0B1 N/A BindingDB: Kd=13000nM, IC50=4950nM
    333287 5dac:A (2.503) BS01 dna 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333288 5dac:A (2.503) BS02 MG 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333289 5dac:A (2.503) BS03 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333290 5dac:A (2.503) BS04 AES 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333291 5dac:A (2.503) BS05 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333292 5dac:B (2.503) BS01 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333293 5dac:B (2.503) BS02 MG 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333294 5dac:B (2.503) BS03 AGS 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333295 5dac:B (2.503) BS04 AES 3.6.-.- GO:0006302 ... G0SHW7 26896444
    333296 5dad:A (2.61) BS01 TX6 ? N/A Q14145 27474998
    333297 5daf:A (2.37) BS01 58E ? N/A Q14145 27474998
    333298 5dag:A (1.6) BS01 ZN ? N/A P55197 26439302
    333299 5dag:A (1.6) BS02 ZN ? N/A P55197 26439302
    333300 5dag:A (1.6) BS03 ZN ? N/A P55197 26439302
    333301 5dag:A (1.6) BS04 ZN ? N/A P55197 26439302
    333302 5dag:A (1.6) BS05 ZN ? N/A P55197 26439302
    333303 5dah:A (2.611) BS01 peptide ? N/A P55197 26439302
    333304 5dah:A (2.611) BS02 ZN ? N/A P55197 26439302
    333305 5dah:A (2.611) BS03 ZN ? N/A P55197 26439302
    333306 5dah:A (2.611) BS04 ZN ? N/A P55197 26439302
    333307 5dah:A (2.611) BS05 ZN ? N/A P55197 26439302
    333308 5dah:A (2.611) BS06 ZN ? N/A P55197 26439302
    333309 5dah:B (2.611) BS01 peptide ? N/A P55197 26439302
    333310 5dah:B (2.611) BS02 ZN ? N/A P55197 26439302
    333311 5dah:B (2.611) BS03 ZN ? N/A P55197 26439302
    333312 5dah:B (2.611) BS04 ZN ? N/A P55197 26439302
    333313 5dah:B (2.611) BS05 ZN ? N/A P55197 26439302
    333314 5dah:B (2.611) BS06 ZN ? N/A P55197 26439302
    333315 5dai:A (2.0) BS01 peptide ? GO:0003677 ... Q5JF32 27141962
    333316 5dal:A (1.5) BS01 5AU 2.5.1.18 GO:0000302 ... P09211 N/A
    333317 5dal:A (1.5) BS02 GSH 2.5.1.18 GO:0000302 ... P09211 N/A
    333318 5dal:B (1.5) BS01 5AU 2.5.1.18 GO:0000302 ... P09211 N/A
    333319 5dal:B (1.5) BS02 GSH 2.5.1.18 GO:0000302 ... P09211 N/A
    333320 5dan:A (2.0) BS01 NAP 1.1.1.- GO:0000166 ... Q9X265 N/A
    333321 5dap:A (1.7) BS01 AKG 1.14.11.81 N/A Q5AR53 26553478
    333322 5daq:A (1.7) BS01 AKG 1.14.11.81 N/A Q5AR53 26553478
    333323 5daq:A (1.7) BS02 58D 1.14.11.81 N/A Q5AR53 26553478
    333324 5dar:B (2.9) BS01 rna ? N/A P54049 N/A
    333325 5dar:C (2.9) BS01 rna ? GO:0003735 ... P54030 N/A
    333326 5dar:E (2.9) BS01 rna ? N/A P54049 N/A
    333327 5dar:F (2.9) BS01 rna ? GO:0003735 ... P54030 N/A
    333328 5das:A (2.2) BS01 NAP 2.7.7.18 GO:0000309 ... P9WJJ5 N/A
    333329 5das:B (2.2) BS01 NAP 2.7.7.18 GO:0000309 ... P9WJJ5 N/A
    333330 5das:C (2.2) BS01 NAP 2.7.7.18 GO:0000309 ... P9WJJ5 N/A
    333331 5das:D (2.2) BS01 NAP 2.7.7.18 GO:0000309 ... P9WJJ5 N/A
    333332 5dat:C0 (3.15) BS01 rna ? GO:0000054 ... Q08745 N/A
    333333 5dat:C1 (3.15) BS01 rna ? GO:0000028 ... P0CX47 N/A
    333334 5dat:C2 (3.15) BS01 rna ? GO:0003735 ... P48589 N/A
    333335 5dat:C3 (3.15) BS01 rna ? GO:0000462 ... P05756 N/A
    333336 5dat:C3 (3.15) BS02 rna ? GO:0000462 ... P05756 N/A
    333337 5dat:C3 (3.15) BS03 OHX ? GO:0000462 ... P05756 N/A
    333338 5dat:C4 (3.15) BS01 rna ? GO:0000028 ... P06367 N/A
    333339 5dat:C5 (3.15) BS01 rna ? GO:0000028 ... Q01855 N/A
    333340 5dat:C5 (3.15) BS02 OHX ? GO:0000028 ... Q01855 N/A
    333341 5dat:C6 (3.15) BS01 rna ? GO:0000462 ... P0CX51 N/A
    333342 5dat:C7 (3.15) BS01 rna ? GO:0000028 ... P02407 N/A
    333343 5dat:C8 (3.15) BS01 rna ? GO:0000054 ... P0CX55 N/A
    333344 5dat:C8 (3.15) BS02 MG ? GO:0000054 ... P0CX55 N/A
    333345 5dat:C9 (3.15) BS01 rna ? GO:0000028 ... P07280 N/A
    333346 5dat:D0 (3.15) BS01 rna ? GO:0000462 ... P38701 N/A
    333347 5dat:D2 (3.15) BS01 rna ? GO:0002181 ... P0C0W1 N/A
    333348 5dat:D3 (3.15) BS01 rna ? GO:0000462 ... P0CX29 N/A
    333349 5dat:D4 (3.15) BS01 rna ? GO:0000462 ... P0CX31 N/A
    333350 5dat:D5 (3.15) BS01 rna ? GO:0002181 ... Q3E792 N/A
    333351 5dat:D6 (3.15) BS01 rna ? GO:0003735 ... P39939 N/A
    333352 5dat:D6 (3.15) BS02 ZN ? GO:0003735 ... P39939 N/A
    333353 5dat:D7 (3.15) BS01 rna ? GO:0000028 ... P35997 N/A
    333354 5dat:D8 (3.15) BS01 rna ? GO:0000028 ... Q3E7X9 N/A
    333355 5dat:D9 (3.15) BS01 rna ? GO:0002181 ... P41057 N/A
    333356 5dat:D9 (3.15) BS02 MG ? GO:0002181 ... P41057 N/A
    333357 5dat:D9 (3.15) BS03 ZN ? GO:0002181 ... P41057 N/A
    333358 5dat:D9 (3.15) BS04 MG ? GO:0002181 ... P41057 N/A
    333359 5dat:D9 (3.15) BS05 OHX ? GO:0002181 ... P41057 N/A
    333360 5dat:E0 (3.15) BS01 rna ? GO:0002181 ... P0CX33 N/A
    333361 5dat:E1 (3.15) BS01 rna ? GO:0003735 ... P05759 N/A
    333362 5dat:E1 (3.15) BS02 ZN ? GO:0003735 ... P05759 N/A
    333363 5dat:L2 (3.15) BS01 rna ? GO:0002181 ... P0CX45 N/A
    333364 5dat:L2 (3.15) BS02 rna ? GO:0002181 ... P0CX45 N/A
    333365 5dat:L2 (3.15) BS03 MG ? GO:0002181 ... P0CX45 N/A
    333366 5dat:L3 (3.15) BS01 rna ? GO:0000027 ... P14126 N/A
    333367 5dat:L3 (3.15) BS02 OHX ? GO:0000027 ... P14126 N/A
    333368 5dat:L4 (3.15) BS01 rna ? GO:0002181 ... P10664 N/A
    333369 5dat:L4 (3.15) BS02 rna ? GO:0002181 ... P10664 N/A
    333370 5dat:L4 (3.15) BS03 OHX ? GO:0002181 ... P10664 N/A
    333371 5dat:L5 (3.15) BS01 rna ? GO:0000027 ... P26321 N/A
    333372 5dat:L5 (3.15) BS02 rna ? GO:0000027 ... P26321 N/A
    333373 5dat:L5 (3.15) BS03 OHX ? GO:0000027 ... P26321 N/A
    333374 5dat:L6 (3.15) BS01 rna ? GO:0000027 ... Q02326 N/A
    333375 5dat:L7 (3.15) BS01 rna ? GO:0000463 ... P05737 N/A
    333376 5dat:L7 (3.15) BS02 rna ? GO:0000463 ... P05737 N/A
    333377 5dat:L7 (3.15) BS03 MG ? GO:0000463 ... P05737 N/A
    333378 5dat:L8 (3.15) BS01 rna ? GO:0000470 ... P17076 N/A
    333379 5dat:L8 (3.15) BS02 rna ? GO:0000470 ... P17076 N/A
    333380 5dat:L9 (3.15) BS01 rna ? GO:0002181 ... P05738 N/A
    333381 5dat:M0 (3.15) BS01 rna ? GO:0000027 ... P41805 N/A
    333382 5dat:M0 (3.15) BS02 rna ? GO:0000027 ... P41805 N/A
    333383 5dat:M0 (3.15) BS03 OHX ? GO:0000027 ... P41805 N/A
    333384 5dat:M1 (3.15) BS01 rna ? GO:0000027 ... Q3E757 N/A
    333385 5dat:M1 (3.15) BS02 rna ? GO:0000027 ... Q3E757 N/A
    333386 5dat:M3 (3.15) BS01 rna ? GO:0002181 ... Q12690 N/A
    333387 5dat:M3 (3.15) BS02 rna ? GO:0002181 ... Q12690 N/A
    333388 5dat:M4 (3.15) BS01 rna ? GO:0000027 ... P36105 N/A
    333389 5dat:M5 (3.15) BS01 rna ? GO:0003735 ... P05748 N/A
    333390 5dat:M5 (3.15) BS02 rna ? GO:0003735 ... P05748 N/A
    333391 5dat:M5 (3.15) BS03 OHX ? GO:0003735 ... P05748 N/A
    333392 5dat:M6 (3.15) BS01 rna ? GO:0000470 ... P26784 N/A
    333393 5dat:M6 (3.15) BS02 MG ? GO:0000470 ... P26784 N/A
    333394 5dat:M7 (3.15) BS01 rna ? GO:0000448 ... P05740 N/A
    333395 5dat:M7 (3.15) BS02 rna ? GO:0000448 ... P05740 N/A
    333396 5dat:M7 (3.15) BS03 MG ? GO:0000448 ... P05740 N/A
    333397 5dat:M7 (3.15) BS04 MG ? GO:0000448 ... P05740 N/A
    333398 5dat:M7 (3.15) BS05 OHX ? GO:0000448 ... P05740 N/A
    333399 5dat:M8 (3.15) BS01 rna ? GO:0002181 ... P0CX49 N/A
    333400 5dat:M9 (3.15) BS01 rna ? GO:0002181 ... P0CX82 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).