SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1672 1673 1674 1675 1676 1677 1678 1679 1680 1681 1682 1683 1684 1685 1686 1687 1688 1689 1690 1691 1692 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    336201 5dox:1b (3.1) BS01 rna ? GO:0003735 ... P80371 26028538
    336202 5dox:1b (3.1) BS02 MG ? GO:0003735 ... P80371 26028538
    336203 5dox:1c (3.1) BS01 rna ? GO:0003676 ... P80372 26028538
    336204 5dox:1d (3.1) BS01 rna ? GO:0003723 ... P80373 26028538
    336205 5dox:1d (3.1) BS02 SF4 ? GO:0003723 ... P80373 26028538
    336206 5dox:1e (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 26028538
    336207 5dox:1f (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 26028538
    336208 5dox:1g (3.1) BS01 rna ? GO:0000049 ... P17291 26028538
    336209 5dox:1g (3.1) BS02 MG ? GO:0000049 ... P17291 26028538
    336210 5dox:1h (3.1) BS01 rna N/A GO:0003735 ... N/A 26028538
    336211 5dox:1i (3.1) BS01 rna ? GO:0000049 ... P80374 26028538
    336212 5dox:1j (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 26028538
    336213 5dox:1k (3.1) BS01 rna ? GO:0003735 ... P80376 26028538
    336214 5dox:1l (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 26028538
    336215 5dox:1l (3.1) BS02 MG ? GO:0000049 ... Q5SHN3 26028538
    336216 5dox:1m (3.1) BS01 rna ? GO:0000049 ... P80377 26028538
    336217 5dox:1m (3.1) BS02 rna ? GO:0000049 ... P80377 26028538
    336218 5dox:1n (3.1) BS01 rna N/A GO:0003735 ... N/A 26028538
    336219 5dox:1n (3.1) BS02 ZN N/A GO:0003735 ... N/A 26028538
    336220 5dox:1o (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 26028538
    336221 5dox:1o (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 26028538
    336222 5dox:1p (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 26028538
    336223 5dox:1q (3.1) BS01 rna N/A GO:0003735 ... N/A 26028538
    336224 5dox:1r (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 26028538
    336225 5dox:1r (3.1) BS02 MG ? GO:0003735 ... Q5SLQ0 26028538
    336226 5dox:1s (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 26028538
    336227 5dox:1t (3.1) BS01 rna ? GO:0003723 ... P80380 26028538
    336228 5dox:20 (3.1) BS01 rna ? GO:0003735 ... P60493 26028538
    336229 5dox:20 (3.1) BS02 rna ? GO:0003735 ... P60493 26028538
    336230 5dox:21 (3.1) BS01 rna ? GO:0003735 ... P60494 26028538
    336231 5dox:22 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 26028538
    336232 5dox:23 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 26028538
    336233 5dox:23 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 26028538
    336234 5dox:24 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 26028538
    336235 5dox:24 (3.1) BS02 ZN ? GO:0003735 ... Q5SJE1 26028538
    336236 5dox:25 (3.1) BS01 rna ? GO:0003735 ... P80339 26028538
    336237 5dox:25 (3.1) BS02 ZN ? GO:0003735 ... P80339 26028538
    336238 5dox:26 (3.1) BS01 rna ? GO:0000049 ... P35871 26028538
    336239 5dox:26 (3.1) BS02 ZN ? GO:0000049 ... P35871 26028538
    336240 5dox:27 (3.1) BS01 rna ? GO:0003735 ... P80340 26028538
    336241 5dox:28 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 26028538
    336242 5dox:29 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 26028538
    336243 5dox:29 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 26028538
    336244 5dox:2D (3.1) BS01 rna ? GO:0002181 ... P60405 26028538
    336245 5dox:2D (3.1) BS02 MG ? GO:0002181 ... P60405 26028538
    336246 5dox:2D (3.1) BS03 MG ? GO:0002181 ... P60405 26028538
    336247 5dox:2E (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 26028538
    336248 5dox:2F (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 26028538
    336249 5dox:2F (3.1) BS02 MG ? GO:0003735 ... Q5SHN9 26028538
    336250 5dox:2G (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 26028538
    336251 5dox:2G (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 26028538
    336252 5dox:2H (3.1) BS01 rna N/A GO:0003735 ... N/A 26028538
    336253 5dox:2I (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 26028538
    336254 5dox:2N (3.1) BS01 rna ? GO:0003729 ... P60488 26028538
    336255 5dox:2O (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 26028538
    336256 5dox:2O (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 26028538
    336257 5dox:2P (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 26028538
    336258 5dox:2Q (3.1) BS01 rna ? GO:0000049 ... P60489 26028538
    336259 5dox:2Q (3.1) BS02 MG ? GO:0000049 ... P60489 26028538
    336260 5dox:2R (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 26028538
    336261 5dox:2S (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 26028538
    336262 5dox:2S (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 26028538
    336263 5dox:2T (3.1) BS01 rna ? GO:0003735 ... P60490 26028538
    336264 5dox:2T (3.1) BS02 rna ? GO:0003735 ... P60490 26028538
    336265 5dox:2U (3.1) BS01 rna ? GO:0000027 ... P60491 26028538
    336266 5dox:2V (3.1) BS01 rna ? GO:0003723 ... P60492 26028538
    336267 5dox:2W (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 26028538
    336268 5dox:2X (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 26028538
    336269 5dox:2Y (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 26028538
    336270 5dox:2Y (3.1) BS02 ZN ? GO:0003723 ... Q5SHP9 26028538
    336271 5dox:2Z (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 26028538
    336272 5dox:2Z (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 26028538
    336273 5dox:2b (3.1) BS01 rna ? GO:0003735 ... P80371 26028538
    336274 5dox:2c (3.1) BS01 rna ? GO:0003676 ... P80372 26028538
    336275 5dox:2d (3.1) BS01 rna ? GO:0003723 ... P80373 26028538
    336276 5dox:2d (3.1) BS02 SF4 ? GO:0003723 ... P80373 26028538
    336277 5dox:2e (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 26028538
    336278 5dox:2f (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 26028538
    336279 5dox:2g (3.1) BS01 rna ? GO:0000049 ... P17291 26028538
    336280 5dox:2h (3.1) BS01 rna N/A GO:0003735 ... N/A 26028538
    336281 5dox:2i (3.1) BS01 rna ? GO:0000049 ... P80374 26028538
    336282 5dox:2j (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 26028538
    336283 5dox:2k (3.1) BS01 rna ? GO:0003735 ... P80376 26028538
    336284 5dox:2k (3.1) BS02 MG ? GO:0003735 ... P80376 26028538
    336285 5dox:2l (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 26028538
    336286 5dox:2m (3.1) BS01 rna ? GO:0000049 ... P80377 26028538
    336287 5dox:2m (3.1) BS02 rna ? GO:0000049 ... P80377 26028538
    336288 5dox:2n (3.1) BS01 rna N/A GO:0003735 ... N/A 26028538
    336289 5dox:2n (3.1) BS02 ZN N/A GO:0003735 ... N/A 26028538
    336290 5dox:2o (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 26028538
    336291 5dox:2o (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 26028538
    336292 5dox:2p (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 26028538
    336293 5dox:2q (3.1) BS01 rna N/A GO:0003735 ... N/A 26028538
    336294 5dox:2r (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 26028538
    336295 5dox:2s (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 26028538
    336296 5dox:2t (3.1) BS01 rna ? GO:0003723 ... P80380 26028538
    336297 5doy:10 (2.6) BS01 rna ? GO:0003735 ... P60493 26028538
    336298 5doy:10 (2.6) BS02 rna ? GO:0003735 ... P60493 26028538
    336299 5doy:10 (2.6) BS03 MG ? GO:0003735 ... P60493 26028538
    336300 5doy:10 (2.6) BS04 MG ? GO:0003735 ... P60493 26028538
    336301 5doy:10 (2.6) BS05 MG ? GO:0003735 ... P60493 26028538
    336302 5doy:10 (2.6) BS06 MG ? GO:0003735 ... P60493 26028538
    336303 5doy:11 (2.6) BS01 rna ? GO:0003735 ... P60494 26028538
    336304 5doy:11 (2.6) BS02 rna ? GO:0003735 ... P60494 26028538
    336305 5doy:12 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 26028538
    336306 5doy:12 (2.6) BS02 MG ? GO:0003735 ... Q5SHP6 26028538
    336307 5doy:13 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 26028538
    336308 5doy:13 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 26028538
    336309 5doy:13 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 26028538
    336310 5doy:13 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 26028538
    336311 5doy:14 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 26028538
    336312 5doy:14 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 26028538
    336313 5doy:15 (2.6) BS01 rna ? GO:0003735 ... P80339 26028538
    336314 5doy:15 (2.6) BS02 MG ? GO:0003735 ... P80339 26028538
    336315 5doy:15 (2.6) BS03 ZN ? GO:0003735 ... P80339 26028538
    336316 5doy:16 (2.6) BS01 rna ? GO:0000049 ... P35871 26028538
    336317 5doy:16 (2.6) BS02 MG ? GO:0000049 ... P35871 26028538
    336318 5doy:16 (2.6) BS03 ZN ? GO:0000049 ... P35871 26028538
    336319 5doy:17 (2.6) BS01 rna ? GO:0003735 ... P80340 26028538
    336320 5doy:17 (2.6) BS02 MG ? GO:0003735 ... P80340 26028538
    336321 5doy:17 (2.6) BS03 MG ? GO:0003735 ... P80340 26028538
    336322 5doy:17 (2.6) BS04 MG ? GO:0003735 ... P80340 26028538
    336323 5doy:17 (2.6) BS05 MG ? GO:0003735 ... P80340 26028538
    336324 5doy:18 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 26028538
    336325 5doy:18 (2.6) BS02 MG ? GO:0003735 ... Q5SKU1 26028538
    336326 5doy:18 (2.6) BS03 MG ? GO:0003735 ... Q5SKU1 26028538
    336327 5doy:18 (2.6) BS04 MG ? GO:0003735 ... Q5SKU1 26028538
    336328 5doy:19 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 26028538
    336329 5doy:19 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 26028538
    336330 5doy:1D (2.6) BS01 rna ? GO:0002181 ... P60405 26028538
    336331 5doy:1D (2.6) BS02 rna ? GO:0002181 ... P60405 26028538
    336332 5doy:1D (2.6) BS03 MG ? GO:0002181 ... P60405 26028538
    336333 5doy:1D (2.6) BS04 MG ? GO:0002181 ... P60405 26028538
    336334 5doy:1D (2.6) BS05 MG ? GO:0002181 ... P60405 26028538
    336335 5doy:1D (2.6) BS06 MG ? GO:0002181 ... P60405 26028538
    336336 5doy:1D (2.6) BS07 MG ? GO:0002181 ... P60405 26028538
    336337 5doy:1D (2.6) BS08 MG ? GO:0002181 ... P60405 26028538
    336338 5doy:1E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 26028538
    336339 5doy:1E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 26028538
    336340 5doy:1E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 26028538
    336341 5doy:1E (2.6) BS04 MG ? GO:0003735 ... Q5SHN8 26028538
    336342 5doy:1F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 26028538
    336343 5doy:1F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 26028538
    336344 5doy:1F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 26028538
    336345 5doy:1F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 26028538
    336346 5doy:1F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 26028538
    336347 5doy:1F (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 26028538
    336348 5doy:1F (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 26028538
    336349 5doy:1F (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 26028538
    336350 5doy:1F (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 26028538
    336351 5doy:1G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 26028538
    336352 5doy:1G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 26028538
    336353 5doy:1G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 26028538
    336354 5doy:1G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 26028538
    336355 5doy:1G (2.6) BS05 MG ? GO:0000049 ... Q5SHQ0 26028538
    336356 5doy:1H (2.6) BS01 rna N/A GO:0003735 ... N/A 26028538
    336357 5doy:1I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 26028538
    336358 5doy:1N (2.6) BS01 rna ? GO:0003729 ... P60488 26028538
    336359 5doy:1N (2.6) BS02 MG ? GO:0003729 ... P60488 26028538
    336360 5doy:1N (2.6) BS03 MG ? GO:0003729 ... P60488 26028538
    336361 5doy:1N (2.6) BS04 MG ? GO:0003729 ... P60488 26028538
    336362 5doy:1N (2.6) BS05 MG ? GO:0003729 ... P60488 26028538
    336363 5doy:1N (2.6) BS06 MG ? GO:0003729 ... P60488 26028538
    336364 5doy:1O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 26028538
    336365 5doy:1O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 26028538
    336366 5doy:1O (2.6) BS03 MG ? GO:0003735 ... Q5SHP8 26028538
    336367 5doy:1P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 26028538
    336368 5doy:1P (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 26028538
    336369 5doy:1P (2.6) BS03 MG ? GO:0003735 ... Q5SHQ7 26028538
    336370 5doy:1P (2.6) BS04 MG ? GO:0003735 ... Q5SHQ7 26028538
    336371 5doy:1P (2.6) BS05 MG ? GO:0003735 ... Q5SHQ7 26028538
    336372 5doy:1P (2.6) BS06 MG ? GO:0003735 ... Q5SHQ7 26028538
    336373 5doy:1Q (2.6) BS01 rna ? GO:0000049 ... P60489 26028538
    336374 5doy:1Q (2.6) BS02 rna ? GO:0000049 ... P60489 26028538
    336375 5doy:1Q (2.6) BS03 rna ? GO:0000049 ... P60489 26028538
    336376 5doy:1Q (2.6) BS04 MG ? GO:0000049 ... P60489 26028538
    336377 5doy:1Q (2.6) BS05 MG ? GO:0000049 ... P60489 26028538
    336378 5doy:1Q (2.6) BS06 MG ? GO:0000049 ... P60489 26028538
    336379 5doy:1Q (2.6) BS07 MG ? GO:0000049 ... P60489 26028538
    336380 5doy:1Q (2.6) BS08 MG ? GO:0000049 ... P60489 26028538
    336381 5doy:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 26028538
    336382 5doy:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 26028538
    336383 5doy:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 26028538
    336384 5doy:1R (2.6) BS04 MG ? GO:0003735 ... Q9Z9H5 26028538
    336385 5doy:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 26028538
    336386 5doy:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 26028538
    336387 5doy:1S (2.6) BS03 MG ? GO:0003735 ... Q5SHQ4 26028538
    336388 5doy:1T (2.6) BS01 rna ? GO:0003735 ... P60490 26028538
    336389 5doy:1T (2.6) BS02 rna ? GO:0003735 ... P60490 26028538
    336390 5doy:1T (2.6) BS03 MG ? GO:0003735 ... P60490 26028538
    336391 5doy:1U (2.6) BS01 rna ? GO:0000027 ... P60491 26028538
    336392 5doy:1U (2.6) BS02 MG ? GO:0000027 ... P60491 26028538
    336393 5doy:1U (2.6) BS03 MG ? GO:0000027 ... P60491 26028538
    336394 5doy:1U (2.6) BS04 MG ? GO:0000027 ... P60491 26028538
    336395 5doy:1U (2.6) BS05 MG ? GO:0000027 ... P60491 26028538
    336396 5doy:1U (2.6) BS06 MG ? GO:0000027 ... P60491 26028538
    336397 5doy:1U (2.6) BS07 MG ? GO:0000027 ... P60491 26028538
    336398 5doy:1U (2.6) BS08 MG ? GO:0000027 ... P60491 26028538
    336399 5doy:1V (2.6) BS01 rna ? GO:0003723 ... P60492 26028538
    336400 5doy:1V (2.6) BS02 MG ? GO:0003723 ... P60492 26028538

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).