SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1676 1677 1678 1679 1680 1681 1682 1683 1684 1685 1686 1687 1688 1689 1690 1691 1692 1693 1694 1695 1696 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    337001 5duh:A (2.24) BS01 peptide ? N/A P03372 27107013
    337002 5duh:A (2.24) BS02 5FT ? N/A P03372 27107013 BindingDB: EC50=12nM
    337003 5duh:B (2.24) BS01 peptide ? N/A P03372 27107013
    337004 5duh:B (2.24) BS02 5FT ? N/A P03372 27107013 BindingDB: EC50=12nM
    337005 5dui:A (2.306) BS01 dna ? GO:0003700 ... Q12778 28223045
    337006 5dui:A (2.306) BS02 dna ? GO:0003700 ... Q12778 28223045
    337007 5dui:B (2.306) BS01 dna ? GO:0003700 ... Q12778 28223045
    337008 5duj:A (2.17) BS01 DGF 2.3.2.- GO:0005886 ... I6Y9J2 27820797
    337009 5duj:B (2.17) BS01 DGF 2.3.2.- GO:0005886 ... I6Y9J2 27820797
    337010 5dul:A (2.6) BS01 NDP 1.1.1.267 GO:0008299 ... Q8ZH62 N/A
    337011 5dul:B (2.6) BS01 NDP 1.1.1.267 GO:0008299 ... Q8ZH62 N/A
    337012 5dul:C (2.6) BS01 NDP 1.1.1.267 GO:0008299 ... Q8ZH62 N/A
    337013 5dul:D (2.6) BS01 NDP 1.1.1.267 GO:0008299 ... Q8ZH62 N/A
    337014 5duo:A (2.4) BS01 PP9 ? GO:0005886 ... Q9RFC8 26516277
    337015 5duo:C (2.4) BS01 PP9 ? GO:0005886 ... Q9RFC8 26516277
    337016 5dus:A (1.432) BS01 APR 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    N/A K9N638 26740631 MOAD: Kd=2.95uM
    337017 5duu:A (2.0) BS01 GOL ? GO:0030246 ... P56470 26828567
    337018 5duu:B (2.0) BS01 GOL ? GO:0030246 ... P56470 26828567
    337019 5duu:C (2.0) BS01 GOL ? GO:0030246 ... P56470 26828567
    337020 5duu:D (2.0) BS01 GOL ? GO:0030246 ... P56470 26828567
    337021 5duv:A (1.9) BS01 BGC ? GO:0030246 ... P56470 26828567
    337022 5duv:A (1.9) BS02 GAL ? GO:0030246 ... P56470 26828567
    337023 5duv:A (1.9) BS03 CA ? GO:0030246 ... P56470 26828567
    337024 5duv:B (1.9) BS01 BGC ? GO:0030246 ... P56470 26828567
    337025 5duv:B (1.9) BS02 GAL ? GO:0030246 ... P56470 26828567
    337026 5duv:B (1.9) BS03 CA ? GO:0030246 ... P56470 26828567
    337027 5duv:C (1.9) BS01 BGC ? GO:0030246 ... P56470 26828567
    337028 5duv:C (1.9) BS02 GAL ? GO:0030246 ... P56470 26828567
    337029 5duv:C (1.9) BS03 CA ? GO:0030246 ... P56470 26828567
    337030 5duv:D (1.9) BS01 BGC ? GO:0030246 ... P56470 26828567
    337031 5duv:D (1.9) BS02 GAL ? GO:0030246 ... P56470 26828567
    337032 5duv:D (1.9) BS03 CA ? GO:0030246 ... P56470 26828567
    337033 5duw:A (1.7) BS01 BGC ? GO:0030246 ... P56470 26828567
    337034 5duw:A (1.7) BS02 SGA ? GO:0030246 ... P56470 26828567
    337035 5duw:B (1.7) BS01 SGA ? GO:0030246 ... P56470 26828567
    337036 5duw:B (1.7) BS02 BGC ? GO:0030246 ... P56470 26828567
    337037 5duw:B (1.7) BS03 SGA ? GO:0030246 ... P56470 26828567
    337038 5duw:C (1.7) BS01 BGC ? GO:0030246 ... P56470 26828567
    337039 5duw:C (1.7) BS02 SGA ? GO:0030246 ... P56470 26828567
    337040 5duw:D (1.7) BS01 BGC ? GO:0030246 ... P56470 26828567
    337041 5duw:D (1.7) BS02 SGA ? GO:0030246 ... P56470 26828567
    337042 5dux:A (1.85) BS01 GOL ? GO:0030246 ... P56470 26828567
    337043 5dux:B (1.85) BS01 BGC ? GO:0030246 ... P56470 26828567
    337044 5dux:B (1.85) BS02 GAL ? GO:0030246 ... P56470 26828567
    337045 5dux:C (1.85) BS01 GOL ? GO:0030246 ... P56470 26828567
    337046 5dux:D (1.85) BS01 BGC ? GO:0030246 ... P56470 26828567
    337047 5dux:D (1.85) BS02 GAL ? GO:0030246 ... P56470 26828567
    337048 5dv2:A (2.07) BS01 C5P 3.1.13.4 GO:0003824 ... Q96LI5 27013054 MOAD: ic50=1250uM
    337049 5dv3:A (2.75) BS01 peptide ? GO:0003677 ... P37231 N/A
    337050 5dv3:A (2.75) BS02 B05 ? GO:0003677 ... P37231 N/A
    337051 5dv4:A (1.8) BS01 NMY 3.1.13.4 GO:0003824 ... Q96LI5 27013054 MOAD: ic50=3370uM
    337052 5dv5:A (2.4) BS01 PKZ N/A GO:0000062 ... N/A N/A
    337053 5dv5:A (2.4) BS02 PKZ N/A GO:0000062 ... N/A N/A
    337054 5dv5:A (2.4) BS03 PKZ N/A GO:0000062 ... N/A N/A
    337055 5dv5:A (2.4) BS04 PKZ N/A GO:0000062 ... N/A N/A
    337056 5dv5:B (2.4) BS01 PKZ N/A GO:0000062 ... N/A N/A
    337057 5dv5:B (2.4) BS02 PKZ N/A GO:0000062 ... N/A N/A
    337058 5dv5:B (2.4) BS03 PKZ N/A GO:0000062 ... N/A N/A
    337059 5dv5:B (2.4) BS04 PKZ N/A GO:0000062 ... N/A N/A
    337060 5dv6:A (2.8) BS01 peptide ? GO:0003677 ... P37231 N/A
    337061 5dv6:A (2.8) BS02 B4H ? GO:0003677 ... P37231 N/A
    337062 5dv7:C (3.5) BS01 rna ? GO:0003725 ... Q9Z1X4 26712564
    337063 5dv7:C (3.5) BS02 rna ? GO:0003725 ... Q9Z1X4 26712564
    337064 5dv8:A (2.75) BS01 peptide ? GO:0003677 ... P37231 N/A
    337065 5dv8:A (2.75) BS02 T51 ? GO:0003677 ... P37231 N/A
    337066 5dva:A (2.50004) BS01 5FL 3.5.2.6 GO:0008658 ... Q6XEC0 27165692 MOAD: Kd=280uM
    BindingDB: Kd=280000nM, IC50=250000nM
    337067 5dva:B (2.50004) BS01 5FL 3.5.2.6 GO:0008658 ... Q6XEC0 27165692 MOAD: Kd=280uM
    BindingDB: Kd=280000nM, IC50=250000nM
    337068 5dva:C (2.50004) BS01 5FL 3.5.2.6 GO:0008658 ... Q6XEC0 27165692 MOAD: Kd=280uM
    BindingDB: Kd=280000nM, IC50=250000nM
    337069 5dva:D (2.50004) BS01 5FL 3.5.2.6 GO:0008658 ... Q6XEC0 27165692 MOAD: Kd=280uM
    BindingDB: Kd=280000nM, IC50=250000nM
    337070 5dvc:A (2.3) BS01 peptide ? GO:0003677 ... P37231 N/A
    337071 5dvc:A (2.3) BS02 T53 ? GO:0003677 ... P37231 N/A
    337072 5dvi:A (1.25) BS01 BGC ? GO:0030313 ... H7BRJ8 26861882 MOAD: Kd=0.39uM
    337073 5dvi:B (1.25) BS01 BGC ? GO:0030313 ... H7BRJ8 26861882 MOAD: Kd=0.39uM
    337074 5dvj:A (1.8) BS01 GAL ? GO:0030313 ... H7BRJ8 26861882
    337075 5dvj:B (1.8) BS01 GAL ? GO:0030313 ... H7BRJ8 26861882
    337076 5dvk:A (2.6) BS01 peptide ? N/A P01857 26996964
    337077 5dvl:A (1.9) BS01 peptide ? N/A P01857 26996964
    337078 5dvm:A (2.95) BS01 peptide ? N/A P01857 26996964
    337079 5dvn:A (2.5) BS01 peptide ? N/A P01857 26996964
    337080 5dvp:A (2.18) BS01 DRW 2.3.2.- GO:0005886 ... I6Y9J2 27820797
    337081 5dvp:B (2.18) BS01 DRW 2.3.2.- GO:0005886 ... I6Y9J2 27820797
    337082 5dvr:A (2.4) BS01 5G9 ? GO:0004672 ... Q9BJF5 N/A
    337083 5dvs:A (2.28) BS01 peptide ? N/A P03372 27107013
    337084 5dvs:A (2.28) BS02 5G7 ? N/A P03372 27107013 BindingDB: EC50=7.0nM
    337085 5dvs:B (2.28) BS01 peptide ? N/A P03372 27107013
    337086 5dvs:B (2.28) BS02 5G7 ? N/A P03372 27107013 BindingDB: EC50=7.0nM
    337087 5dvv:A (2.505) BS01 peptide ? N/A P03372 27107013
    337088 5dvv:A (2.505) BS02 5G6 ? N/A P03372 27107013 BindingDB: EC50=3.0nM
    337089 5dvv:B (2.505) BS01 peptide ? N/A P03372 27107013
    337090 5dvv:B (2.505) BS02 5G6 ? N/A P03372 27107013 BindingDB: EC50=3.0nM
    337091 5dvx:A (1.598) BS01 ZN 4.2.1.1 GO:0004089 ... Q16790 27439028
    337092 5dvx:A (1.598) BS02 ZN 4.2.1.1 GO:0004089 ... Q16790 27439028
    337093 5dvx:B (1.598) BS01 ZN 4.2.1.1 GO:0004089 ... Q16790 27439028
    337094 5dvx:B (1.598) BS02 ZN 4.2.1.1 GO:0004089 ... Q16790 27439028
    337095 5dw0:A (2.01) BS01 PLS 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337096 5dw0:B (2.01) BS01 PLS 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337097 5dw0:C (2.01) BS01 PLS 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337098 5dw0:D (2.01) BS01 PLS 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337099 5dw1:A (1.55) BS01 5GD ? N/A P25440 27282480 MOAD: ic50=0.08uM
    337100 5dw1:B (1.55) BS01 5GD ? N/A P25440 27282480 MOAD: ic50=0.08uM
    337101 5dw1:C (1.55) BS01 5GD ? N/A P25440 27282480 MOAD: ic50=0.08uM
    337102 5dw1:D (1.55) BS01 5GD ? N/A P25440 27282480 MOAD: ic50=0.08uM
    337103 5dw2:A (1.12) BS01 5GD ? N/A O60885 27282480 MOAD: Kd=1.44uM
    BindingDB: IC50=20nM
    337104 5dw3:A (1.74) BS01 TRP 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337105 5dw3:B (1.74) BS01 TRP 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337106 5dw3:C (1.74) BS01 TRP 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337107 5dw3:D (1.74) BS01 TRP 4.2.1.20 GO:0000162 ... Q8U093 26553994
    337108 5dw4:A (1.622) BS01 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337109 5dw4:A (1.622) BS02 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337110 5dw4:B (1.622) BS01 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337111 5dw4:B (1.622) BS02 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337112 5dw4:B (1.622) BS03 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337113 5dw5:A (1.656) BS01 0T1 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337114 5dw5:A (1.656) BS02 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337115 5dw5:B (1.656) BS01 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337116 5dw5:B (1.656) BS02 0T1 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337117 5dw6:A (1.548) BS01 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337118 5dw6:A (1.548) BS02 0T1 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337119 5dw6:A (1.548) BS03 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337120 5dw6:B (1.548) BS01 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337121 5dw6:B (1.548) BS02 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337122 5dw6:B (1.548) BS03 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337123 5dw6:B (1.548) BS04 0T1 2.8.3.18 GO:0003986 ... B3EY95 27242998
    337124 5dw8:A (2.4) BS01 CA N/A N/A N/A N/A
    337125 5dw8:A (2.4) BS02 2AM N/A N/A N/A N/A
    337126 5dw8:A (2.4) BS03 CA N/A N/A N/A N/A
    337127 5dw8:B (2.4) BS01 CA N/A N/A N/A N/A
    337128 5dw8:B (2.4) BS02 CA N/A N/A N/A N/A
    337129 5dw8:B (2.4) BS03 2AM N/A N/A N/A N/A
    337130 5dwa:A (1.5) BS01 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337131 5dwa:A (1.5) BS02 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337132 5dwa:B (1.5) BS01 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337133 5dwa:B (1.5) BS02 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337134 5dwb:A (2.4) BS01 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337135 5dwb:A (2.4) BS02 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337136 5dwb:B (2.4) BS01 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337137 5dwb:B (2.4) BS02 dna 3.1.21.4 GO:0004519 ... Q9KHV6 28039325
    337138 5dwe:A (1.92) BS01 peptide ? N/A P03372 27107013
    337139 5dwe:A (1.92) BS02 5G5 ? N/A P03372 27107013 BindingDB: EC50=1.000000nM
    337140 5dwe:B (1.92) BS01 peptide ? N/A P03372 27107013
    337141 5dwe:B (1.92) BS02 5G5 ? N/A P03372 27107013 BindingDB: EC50=1.000000nM
    337142 5dwg:A (2.3) BS01 peptide ? N/A P03372 27107013
    337143 5dwg:A (2.3) BS02 5G4 ? N/A P03372 27107013
    337144 5dwg:B (2.3) BS01 peptide ? N/A P03372 27107013
    337145 5dwg:B (2.3) BS02 5G4 ? N/A P03372 27107013
    337146 5dwi:A (2.43) BS01 peptide ? N/A P03372 27107013
    337147 5dwi:A (2.43) BS02 5G3 ? N/A P03372 27107013 BindingDB: EC50=0.100000nM
    337148 5dwi:B (2.43) BS01 peptide ? N/A P03372 27107013
    337149 5dwi:B (2.43) BS02 5G3 ? N/A P03372 27107013 BindingDB: EC50=0.100000nM
    337150 5dwj:A (2.001) BS01 peptide ? N/A P03372 27107013
    337151 5dwj:A (2.001) BS02 5J2 ? N/A P03372 27107013 BindingDB: EC50=10.0nM
    337152 5dwj:B (2.001) BS01 peptide ? N/A P03372 27107013
    337153 5dwj:B (2.001) BS02 5J2 ? N/A P03372 27107013 BindingDB: EC50=10.0nM
    337154 5dwk:A (2.601) BS01 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337155 5dwk:A (2.601) BS02 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337156 5dwk:A (2.601) BS03 78M 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337157 5dwk:B (2.601) BS01 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337158 5dwk:B (2.601) BS02 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337159 5dwk:B (2.601) BS03 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337160 5dwk:B (2.601) BS04 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337161 5dwk:B (2.601) BS05 78M 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337162 5dwk:C (2.601) BS01 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337163 5dwk:C (2.601) BS02 78M 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337164 5dwk:C (2.601) BS03 78M 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337165 5dwk:C (2.601) BS04 78M 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337166 5dwk:C (2.601) BS05 78M 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337167 5dwk:C (2.601) BS06 78M 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337168 5dwk:C (2.601) BS07 ZN 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337169 5dwk:D (2.601) BS01 78N 2.7.1.107 GO:0001727 ... P0ABN1 26960129
    337170 5dwl:A (2.2) BS01 peptide ? GO:0003677 ... P37231 N/A
    337171 5dwl:A (2.2) BS02 3JX ? GO:0003677 ... P37231 N/A BindingDB: IC50=80nM, EC50=4288nM
    337172 5dwn:A (1.95) BS01 ACO 2.3.1.- GO:0016746 ... A0A0H3AQB6 N/A
    337173 5dwn:B (1.95) BS01 ACO 2.3.1.- GO:0016746 ... A0A0H3AQB6 N/A
    337174 5dwn:C (1.95) BS01 ACO 2.3.1.- GO:0016746 ... A0A0H3AQB6 N/A
    337175 5dwn:D (1.95) BS01 ACO 2.3.1.- GO:0016746 ... A0A0H3AQB6 N/A
    337176 5dwq:A (2.36) BS01 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337177 5dwq:B (2.36) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337178 5dwq:B (2.36) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337179 5dwq:C (2.36) BS01 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337180 5dwq:D (2.36) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337181 5dwq:D (2.36) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337182 5dwr:A (2.0) BS01 5H7 2.7.11.1 GO:0004672 ... P11309 26505898 MOAD: Ki<0.001uM
    BindingDB: IC50=6.0nM, Ki=0.006000nM
    337183 5dws:A (1.65) BS01 peptide 2.3.2.26 N/A Q96J02 N/A
    337184 5dws:C (1.65) BS01 peptide 2.3.2.26 N/A Q96J02 N/A
    337185 5dws:E (1.65) BS01 peptide 2.3.2.26 N/A Q96J02 N/A
    337186 5dws:G (1.65) BS01 peptide 2.3.2.26 N/A Q96J02 N/A
    337187 5dwv:A (2.3) BS01 5J4 1.13.12.7 GO:0004497 ... P08659 N/A
    337188 5dx0:A (2.05) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337189 5dx0:A (2.05) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337190 5dx0:B (2.05) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337191 5dx0:B (2.05) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337192 5dx0:C (2.05) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337193 5dx0:C (2.05) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337194 5dx0:D (2.05) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337195 5dx0:D (2.05) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337196 5dx1:A (1.93) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337197 5dx1:A (1.93) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337198 5dx1:B (1.93) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337199 5dx1:B (1.93) BS02 SFG 2.1.1.319 GO:0016274 ... Q86X55 26551522
    337200 5dx1:C (1.93) BS01 peptide 2.1.1.319 GO:0016274 ... Q86X55 26551522

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).