SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1681 1682 1683 1684 1685 1686 1687 1688 1689 1690 1691 1692 1693 1694 1695 1696 1697 1698 1699 1700 1701 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    338001 5e5c:A (2.1) BS01 ZN 3.5.2.2 GO:0004157 ... Q9I676 27576201
    338002 5e5c:A (2.1) BS02 ZN 3.5.2.2 GO:0004157 ... Q9I676 27576201
    338003 5e5c:C (2.1) BS01 ZN 3.5.2.2 GO:0004157 ... Q9I676 27576201
    338004 5e5c:C (2.1) BS02 ZN 3.5.2.2 GO:0004157 ... Q9I676 27576201
    338005 5e5g:A (1.95) BS01 MN 2.5.1.54 GO:0003849 ... O53512 27128682
    338006 5e5g:A (1.95) BS02 DTR 2.5.1.54 GO:0003849 ... O53512 27128682 MOAD: Kd=700uM
    338007 5e5g:A (1.95) BS03 DTR 2.5.1.54 GO:0003849 ... O53512 27128682 MOAD: Kd=700uM
    338008 5e5g:B (1.95) BS01 DTR 2.5.1.54 GO:0003849 ... O53512 27128682 MOAD: Kd=700uM
    338009 5e5g:B (1.95) BS02 MN 2.5.1.54 GO:0003849 ... O53512 27128682
    338010 5e5g:B (1.95) BS03 DTR 2.5.1.54 GO:0003849 ... O53512 27128682 MOAD: Kd=700uM
    338011 5e5g:B (1.95) BS04 DTR 2.5.1.54 GO:0003849 ... O53512 27128682 MOAD: Kd=700uM
    338012 5e5h:A (2.052) BS01 0T1 2.8.3.18 GO:0003986 ... B3EY95 27242998
    338013 5e5h:B (2.052) BS01 0T1 2.8.3.18 GO:0003986 ... B3EY95 27242998
    338014 5e5h:B (2.052) BS02 ACT 2.8.3.18 GO:0003986 ... B3EY95 27242998
    338015 5e5i:A (1.7) BS01 5NJ 2.6.1.13 GO:0004587 ... S8EY38 N/A
    338016 5e5i:A (1.7) BS02 5JV 2.6.1.13 GO:0004587 ... S8EY38 N/A
    338017 5e5i:B (1.7) BS01 5NJ 2.6.1.13 GO:0004587 ... S8EY38 N/A
    338018 5e5i:B (1.7) BS02 5JV 2.6.1.13 GO:0004587 ... S8EY38 N/A
    338019 5e5j:A (1.85) BS01 017 ? GO:0004190 ... Q7SSI0 26958828
    338020 5e5j:B (1.85) BS01 017 ? GO:0004190 ... Q7SSI0 26958828
    338021 5e5k:A (1.75) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    N/A P03367 26958828
    338022 5e5k:B (1.75) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    N/A P03367 26958828
    338023 5e5o:A (2.36) BS01 dna ? GO:0004519 ... F7WD42 26705195
    338024 5e5o:A (2.36) BS02 dna ? GO:0004519 ... F7WD42 26705195
    338025 5e5o:A (2.36) BS03 CA ? GO:0004519 ... F7WD42 26705195
    338026 5e5o:A (2.36) BS04 CA ? GO:0004519 ... F7WD42 26705195
    338027 5e5o:A (2.36) BS05 CA ? GO:0004519 ... F7WD42 26705195
    338028 5e5s:A (2.29) BS01 dna ? GO:0004519 ... F7WD42 26705195
    338029 5e5s:A (2.29) BS02 dna ? GO:0004519 ... F7WD42 26705195
    338030 5e5s:A (2.29) BS03 dna ? GO:0004519 ... F7WD42 26705195
    338031 5e5s:A (2.29) BS04 MG ? GO:0004519 ... F7WD42 26705195
    338032 5e5s:A (2.29) BS05 MG ? GO:0004519 ... F7WD42 26705195
    338033 5e5u:A (2.0) BS01 1PS 3.1.3.48 GO:0004089 ... Q05909 27539848
    338034 5e5u:A (2.0) BS02 1PS 3.1.3.48 GO:0004089 ... Q05909 27539848
    338035 5e5u:C (2.0) BS01 1PS 3.1.3.48 GO:0004089 ... Q05909 27539848
    338036 5e5u:C (2.0) BS02 1PS 3.1.3.48 GO:0004089 ... Q05909 27539848
    338037 5e62:A (2.203) BS01 5N6 3.1.1.53 GO:0016788 ... K9LG83 26816272
    338038 5e62:C (2.203) BS01 5N6 3.1.1.53 GO:0016788 ... K9LG83 26816272
    338039 5e63:A (2.6) BS01 dna ? GO:0004519 ... F7WD42 26705195
    338040 5e63:A (2.6) BS02 dna ? GO:0004519 ... F7WD42 26705195
    338041 5e63:A (2.6) BS03 dna ? GO:0004519 ... F7WD42 26705195
    338042 5e63:A (2.6) BS04 dna ? GO:0004519 ... F7WD42 26705195
    338043 5e63:A (2.6) BS05 MG ? GO:0004519 ... F7WD42 26705195
    338044 5e63:A (2.6) BS06 MG ? GO:0004519 ... F7WD42 26705195
    338045 5e65:A (2.2) BS01 5N6 3.1.1.53 GO:0016788 ... K9LG83 26816272
    338046 5e65:C (2.2) BS01 5N6 3.1.1.53 GO:0016788 ... K9LG83 26816272
    338047 5e66:A (3.1) BS01 5KQ 3.1.1.53 GO:0016788 ... K9LG83 26816272
    338048 5e66:A (3.1) BS02 5KQ 3.1.1.53 GO:0016788 ... K9LG83 26816272
    338049 5e67:A (2.2) BS01 dna ? GO:0004519 ... F7WD42 26705195
    338050 5e67:A (2.2) BS02 dna ? GO:0004519 ... F7WD42 26705195
    338051 5e67:A (2.2) BS03 MG ? GO:0004519 ... F7WD42 26705195
    338052 5e67:A (2.2) BS04 MG ? GO:0004519 ... F7WD42 26705195
    338053 5e67:A (2.2) BS05 MXE ? GO:0004519 ... F7WD42 26705195
    338054 5e68:A (1.58) BS01 ZN 4.4.1.21 GO:0005506 ... Q8Z4D7 N/A
    338055 5e68:A (1.58) BS02 PAV 4.4.1.21 GO:0005506 ... Q8Z4D7 N/A
    338056 5e68:A (1.58) BS03 MET 4.4.1.21 GO:0005506 ... Q8Z4D7 N/A
    338057 5e68:B (1.58) BS01 PAV 4.4.1.21 GO:0005506 ... Q8Z4D7 N/A
    338058 5e68:B (1.58) BS02 ZN 4.4.1.21 GO:0005506 ... Q8Z4D7 N/A
    338059 5e68:B (1.58) BS03 MET 4.4.1.21 GO:0005506 ... Q8Z4D7 N/A
    338060 5e69:A (1.85) BS01 dna ? GO:0003700 ... P04150 29626214
    338061 5e69:A (1.85) BS02 dna ? GO:0003700 ... P04150 29626214
    338062 5e69:A (1.85) BS03 ZN ? GO:0003700 ... P04150 29626214
    338063 5e69:A (1.85) BS04 ZN ? GO:0003700 ... P04150 29626214
    338064 5e69:B (1.85) BS01 dna ? GO:0003700 ... P04150 29626214
    338065 5e69:B (1.85) BS02 ZN ? GO:0003700 ... P04150 29626214
    338066 5e69:B (1.85) BS03 ZN ? GO:0003700 ... P04150 29626214
    338067 5e6a:A (2.197) BS01 dna ? GO:0003700 ... P04150 29626214
    338068 5e6a:A (2.197) BS02 dna ? GO:0003700 ... P04150 29626214
    338069 5e6a:A (2.197) BS03 ZN ? GO:0003700 ... P04150 29626214
    338070 5e6a:A (2.197) BS04 ZN ? GO:0003700 ... P04150 29626214
    338071 5e6a:B (2.197) BS01 dna ? GO:0003700 ... P04150 29626214
    338072 5e6a:B (2.197) BS02 ZN ? GO:0003700 ... P04150 29626214
    338073 5e6a:B (2.197) BS03 ZN ? GO:0003700 ... P04150 29626214
    338074 5e6b:A (2.25) BS01 dna ? GO:0003700 ... P04150 29626214
    338075 5e6b:A (2.25) BS02 dna ? GO:0003700 ... P04150 29626214
    338076 5e6b:A (2.25) BS03 ZN ? GO:0003700 ... P04150 29626214
    338077 5e6b:A (2.25) BS04 ZN ? GO:0003700 ... P04150 29626214
    338078 5e6b:B (2.25) BS01 dna ? GO:0003700 ... P04150 29626214
    338079 5e6b:B (2.25) BS02 ZN ? GO:0003700 ... P04150 29626214
    338080 5e6b:B (2.25) BS03 ZN ? GO:0003700 ... P04150 29626214
    338081 5e6c:A (2.2) BS01 dna ? GO:0003700 ... P04150 29626214
    338082 5e6c:A (2.2) BS02 dna ? GO:0003700 ... P04150 29626214
    338083 5e6c:A (2.2) BS03 ZN ? GO:0003700 ... P04150 29626214
    338084 5e6c:A (2.2) BS04 ZN ? GO:0003700 ... P04150 29626214
    338085 5e6c:B (2.2) BS01 dna ? GO:0003700 ... P04150 29626214
    338086 5e6c:B (2.2) BS02 ZN ? GO:0003700 ... P04150 29626214
    338087 5e6c:B (2.2) BS03 ZN ? GO:0003700 ... P04150 29626214
    338088 5e6d:A (2.4) BS01 dna ? GO:0003700 ... P04150 29626214
    338089 5e6d:A (2.4) BS02 dna ? GO:0003700 ... P04150 29626214
    338090 5e6d:A (2.4) BS03 ZN ? GO:0003700 ... P04150 29626214
    338091 5e6d:A (2.4) BS04 ZN ? GO:0003700 ... P04150 29626214
    338092 5e6d:B (2.4) BS01 dna ? GO:0003700 ... P04150 29626214
    338093 5e6d:B (2.4) BS02 ZN ? GO:0003700 ... P04150 29626214
    338094 5e6d:B (2.4) BS03 ZN ? GO:0003700 ... P04150 29626214
    338095 5e6e:A (1.76) BS01 HEM ? GO:0004601 ... P69905 27085422
    338096 5e6e:B (1.76) BS01 HEM ? GO:0004601 ... P68871 27085422
    338097 5e6f:A (2.6) BS01 MG ? GO:0000287 ... Q6VZ86 27013661
    338098 5e6f:B (2.6) BS01 MG ? GO:0000287 ... Q6VZ86 27013661
    338099 5e6h:A (2.238) BS01 MN 1.14.11.67 N/A P29375 26645689
    338100 5e6h:A (2.238) BS02 AKG 1.14.11.67 N/A P29375 26645689 MOAD: Kd=79uM
    338101 5e6i:B (4.0) BS01 peptide N/A N/A N/A N/A
    338102 5e6i:C (4.0) BS01 peptide ? N/A P04439 N/A
    338103 5e6i:F (4.0) BS01 peptide ? GO:0002250 ... K7N5M3 N/A
    338104 5e6i:I (4.0) BS01 peptide ? N/A P04439 N/A
    338105 5e6i:L (4.0) BS01 peptide N/A N/A N/A N/A
    338106 5e6i:M (4.0) BS01 peptide ? N/A P04439 N/A
    338107 5e6i:P (4.0) BS01 peptide ? GO:0002250 ... K7N5M3 N/A
    338108 5e6i:Q (4.0) BS01 peptide N/A N/A N/A N/A
    338109 5e6i:R (4.0) BS01 peptide ? N/A P04439 N/A
    338110 5e6m:A (2.927) BS01 rna 2.7.7.-
    6.1.1.14
    GO:0000166 ... P41250 27261259
    338111 5e6m:A (2.927) BS02 rna 2.7.7.-
    6.1.1.14
    GO:0000166 ... P41250 27261259
    338112 5e6m:A (2.927) BS03 GAP 2.7.7.-
    6.1.1.14
    GO:0000166 ... P41250 27261259
    338113 5e6m:B (2.927) BS01 rna 2.7.7.-
    6.1.1.14
    GO:0000166 ... P41250 27261259
    338114 5e6m:B (2.927) BS02 rna 2.7.7.-
    6.1.1.14
    GO:0000166 ... P41250 27261259
    338115 5e6m:B (2.927) BS03 GAP 2.7.7.-
    6.1.1.14
    GO:0000166 ... P41250 27261259
    338116 5e6o:A (1.8) BS01 peptide ? N/A Q23536 26687600
    338117 5e6o:A (1.8) BS02 peptide ? N/A Q23536 26687600
    338118 5e6o:B (1.8) BS01 peptide ? N/A Q23536 26687600
    338119 5e6o:C (1.8) BS01 peptide ? N/A Q23536 26687600
    338120 5e6o:C (1.8) BS02 peptide ? N/A Q23536 26687600
    338121 5e6o:D (1.8) BS01 peptide ? N/A Q23536 26687600
    338122 5e6q:B (2.305) BS01 peptide ? GO:0005737 ... P52293 26304019
    338123 5e6r:A (2.901) BS01 MG ? GO:0007155 ... P20701 26936951
    338124 5e6r:A (2.901) BS02 CA ? GO:0007155 ... P20701 26936951
    338125 5e6r:A (2.901) BS03 CA ? GO:0007155 ... P20701 26936951
    338126 5e6r:B (2.901) BS01 CA ? N/A P05107 26936951
    338127 5e6r:B (2.901) BS02 CA ? N/A P05107 26936951
    338128 5e6s:A (2.15) BS01 MG ? GO:0007155 ... P20701 26936951
    338129 5e6s:A (2.15) BS02 CA ? GO:0007155 ... P20701 26936951
    338130 5e6s:A (2.15) BS03 CA ? GO:0007155 ... P20701 26936951
    338131 5e6s:A (2.15) BS04 CA ? GO:0007155 ... P20701 26936951
    338132 5e6s:B (2.15) BS01 CA ? N/A P05107 26936951
    338133 5e6s:B (2.15) BS02 CA ? N/A P05107 26936951
    338134 5e6s:C (2.15) BS01 MG ? GO:0007155 ... P20701 26936951
    338135 5e6s:C (2.15) BS02 CA ? GO:0007155 ... P20701 26936951
    338136 5e6s:C (2.15) BS03 CA ? GO:0007155 ... P20701 26936951
    338137 5e6s:C (2.15) BS04 CA ? GO:0007155 ... P20701 26936951
    338138 5e6s:D (2.15) BS01 CA ? N/A P05107 26936951
    338139 5e6s:D (2.15) BS02 CA ? N/A P05107 26936951
    338140 5e6s:E (2.15) BS01 MG ? GO:0007155 ... P20701 26936951
    338141 5e6s:E (2.15) BS02 CA ? GO:0007155 ... P20701 26936951
    338142 5e6s:E (2.15) BS03 CA ? GO:0007155 ... P20701 26936951
    338143 5e6s:E (2.15) BS04 CA ? GO:0007155 ... P20701 26936951
    338144 5e6s:F (2.15) BS01 CA ? N/A P05107 26936951
    338145 5e6s:F (2.15) BS02 CA ? N/A P05107 26936951
    338146 5e6t:B (2.27) BS01 ZN ? N/A E6Y5B1 26599362
    338147 5e6t:B (2.27) BS02 ZN ? N/A E6Y5B1 26599362
    338148 5e6u:A (2.5) BS01 MG ? GO:0007155 ... P20701 26936951
    338149 5e6u:A (2.5) BS02 CA ? GO:0007155 ... P20701 26936951
    338150 5e6u:A (2.5) BS03 CA ? GO:0007155 ... P20701 26936951
    338151 5e6u:B (2.5) BS01 MG ? N/A P05107 26936951
    338152 5e6u:B (2.5) BS02 CA ? N/A P05107 26936951
    338153 5e6u:B (2.5) BS03 CA ? N/A P05107 26936951
    338154 5e6y:A (2.6) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338155 5e6y:A (2.6) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338156 5e6y:B (2.6) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338157 5e6y:B (2.6) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338158 5e6y:C (2.6) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338159 5e6y:C (2.6) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338160 5e6y:C (2.6) BS03 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338161 5e6y:C (2.6) BS04 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338162 5e6y:C (2.6) BS05 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338163 5e6y:D (2.6) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338164 5e6y:D (2.6) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338165 5e6y:D (2.6) BS03 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338166 5e6y:D (2.6) BS04 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338167 5e6y:D (2.6) BS05 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338168 5e6y:D (2.6) BS06 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338169 5e6z:A (1.878) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338170 5e6z:A (1.878) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338171 5e6z:A (1.878) BS03 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338172 5e6z:A (1.878) BS04 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338173 5e6z:B (1.878) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338174 5e6z:B (1.878) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338175 5e6z:C (1.878) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338176 5e6z:C (1.878) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338177 5e6z:C (1.878) BS03 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338178 5e6z:C (1.878) BS04 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338179 5e6z:D (1.878) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338180 5e6z:D (1.878) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338181 5e70:A (2.33) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338182 5e70:A (2.33) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338183 5e70:B (2.33) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338184 5e70:B (2.33) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338185 5e70:C (2.33) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338186 5e70:C (2.33) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338187 5e70:D (2.33) BS01 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338188 5e70:D (2.33) BS02 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338189 5e70:D (2.33) BS03 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338190 5e70:D (2.33) BS04 GLC 2.4.1.18 GO:0003824 ... A7ZSW5 27139627
    338191 5e72:A (1.739) BS01 SAM ? GO:0003676 ... Q5JID5 27325738
    338192 5e73:A (1.71) BS01 UO1 ? N/A Q9UIF8 26982797 MOAD: Kd=23uM
    BindingDB: Kd=23000nM
    338193 5e74:A (1.783) BS01 5KH ? N/A Q9UIF8 26982797 MOAD: Kd=39uM
    BindingDB: Kd=39000nM, IC50=27000nM
    338194 5e76:A (2.3) BS01 BGC ? GO:0009279 ... A7LXT5 27118585
    338195 5e76:A (2.3) BS02 BGC ? GO:0009279 ... A7LXT5 27118585
    338196 5e76:A (2.3) BS03 XYS ? GO:0009279 ... A7LXT5 27118585
    338197 5e78:A (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 28739446
    338198 5e78:B (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 28739446
    338199 5e78:B (2.0) BS02 5KK 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 28739446
    338200 5e79:A (3.5) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 26863980

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).