SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    338401 5e7c:Z (4.5) BS02 CLA ? GO:0009523 ... Q8DHJ2 26863980
    338402 5e7c:a (4.5) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 26863980
    338403 5e7c:a (4.5) BS02 BCT 1.10.3.9 GO:0005506 ... P0A444 26863980
    338404 5e7c:a (4.5) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 26863980
    338405 5e7c:a (4.5) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 26863980
    338406 5e7c:a (4.5) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 26863980
    338407 5e7c:a (4.5) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 26863980
    338408 5e7c:a (4.5) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 26863980
    338409 5e7c:a (4.5) BS08 FE2 1.10.3.9 GO:0005506 ... P0A444 26863980
    338410 5e7c:a (4.5) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 26863980
    338411 5e7c:a (4.5) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 26863980
    338412 5e7c:b (4.5) BS01 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338413 5e7c:b (4.5) BS02 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338414 5e7c:b (4.5) BS03 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338415 5e7c:b (4.5) BS04 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338416 5e7c:b (4.5) BS05 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338417 5e7c:b (4.5) BS06 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338418 5e7c:b (4.5) BS07 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338419 5e7c:b (4.5) BS08 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338420 5e7c:b (4.5) BS09 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338421 5e7c:b (4.5) BS10 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338422 5e7c:b (4.5) BS11 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338423 5e7c:b (4.5) BS12 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338424 5e7c:b (4.5) BS13 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338425 5e7c:b (4.5) BS14 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338426 5e7c:b (4.5) BS15 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338427 5e7c:b (4.5) BS16 CLA ? GO:0009521 ... Q8DIQ1 26863980
    338428 5e7c:c (4.5) BS01 OEX ? GO:0005737 ... Q8DIF8 26863980
    338429 5e7c:c (4.5) BS02 CLA ? GO:0005737 ... Q8DIF8 26863980
    338430 5e7c:c (4.5) BS03 CLA ? GO:0005737 ... Q8DIF8 26863980
    338431 5e7c:c (4.5) BS04 CLA ? GO:0005737 ... Q8DIF8 26863980
    338432 5e7c:c (4.5) BS05 CLA ? GO:0005737 ... Q8DIF8 26863980
    338433 5e7c:c (4.5) BS06 CLA ? GO:0005737 ... Q8DIF8 26863980
    338434 5e7c:c (4.5) BS07 CLA ? GO:0005737 ... Q8DIF8 26863980
    338435 5e7c:c (4.5) BS08 CLA ? GO:0005737 ... Q8DIF8 26863980
    338436 5e7c:c (4.5) BS09 CLA ? GO:0005737 ... Q8DIF8 26863980
    338437 5e7c:c (4.5) BS10 CLA ? GO:0005737 ... Q8DIF8 26863980
    338438 5e7c:c (4.5) BS11 CLA ? GO:0005737 ... Q8DIF8 26863980
    338439 5e7c:c (4.5) BS12 CLA ? GO:0005737 ... Q8DIF8 26863980
    338440 5e7c:c (4.5) BS13 CLA ? GO:0005737 ... Q8DIF8 26863980
    338441 5e7c:c (4.5) BS14 CLA ? GO:0005737 ... Q8DIF8 26863980
    338442 5e7c:d (4.5) BS01 BCT 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338443 5e7c:d (4.5) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338444 5e7c:d (4.5) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338445 5e7c:d (4.5) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338446 5e7c:d (4.5) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338447 5e7c:d (4.5) BS06 FE2 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338448 5e7c:d (4.5) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338449 5e7c:d (4.5) BS08 PHO 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338450 5e7c:d (4.5) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338451 5e7c:d (4.5) BS10 CLA 1.10.3.9 GO:0005506 ... Q8CM25 26863980
    338452 5e7c:e (4.5) BS01 HEM ? GO:0005506 ... Q8DIP0 26863980
    338453 5e7c:f (4.5) BS01 HEM ? GO:0009523 ... Q8DIN9 26863980
    338454 5e7c:h (4.5) BS01 CLA ? GO:0009523 ... Q8DJ43 26863980
    338455 5e7c:h (4.5) BS02 CLA ? GO:0009523 ... Q8DJ43 26863980
    338456 5e7c:h (4.5) BS03 CLA ? GO:0009523 ... Q8DJ43 26863980
    338457 5e7c:h (4.5) BS04 CLA ? GO:0009523 ... Q8DJ43 26863980
    338458 5e7c:h (4.5) BS05 CLA ? GO:0009523 ... Q8DJ43 26863980
    338459 5e7c:h (4.5) BS06 CLA ? GO:0009523 ... Q8DJ43 26863980
    338460 5e7c:i (4.5) BS01 CLA ? GO:0005737 ... Q8DJZ6 26863980
    338461 5e7c:i (4.5) BS02 CLA ? GO:0005737 ... Q8DJZ6 26863980
    338462 5e7c:j (4.5) BS01 MG ? GO:0009523 ... P59087 26863980
    338463 5e7c:k (4.5) BS01 peptide ? GO:0009523 ... Q9F1K9 26863980
    338464 5e7c:k (4.5) BS02 CLA ? GO:0009523 ... Q9F1K9 26863980
    338465 5e7c:k (4.5) BS03 CLA ? GO:0009523 ... Q9F1K9 26863980
    338466 5e7c:o (4.5) BS01 CA ? GO:0009523 ... P0A431 26863980
    338467 5e7c:v (4.5) BS01 HEM ? GO:0005506 ... P0A386 26863980
    338468 5e7c:x (4.5) BS01 CLA ? GO:0009523 ... Q9F1R6 26863980
    338469 5e7c:z (4.5) BS01 peptide ? GO:0009523 ... Q8DHJ2 26863980
    338470 5e7c:z (4.5) BS02 CLA ? GO:0009523 ... Q8DHJ2 26863980
    338471 5e7d:A (1.87) BS01 5KL ? GO:0006338 ... Q86U86 N/A
    338472 5e7d:B (1.87) BS01 5KL ? GO:0006338 ... Q86U86 N/A
    338473 5e7d:C (1.87) BS01 5KL ? GO:0006338 ... Q86U86 N/A
    338474 5e7d:D (1.87) BS01 5KL ? GO:0006338 ... Q86U86 N/A
    338475 5e7g:A (2.37) BS01 XYS ? GO:0009279 ... A7LXT4 27118585
    338476 5e7g:A (2.37) BS02 CA ? GO:0009279 ... A7LXT4 27118585
    338477 5e7j:A (2.23) BS01 AMP 3.6.4.13 GO:0003676 ... O00571 26598523
    338478 5e7k:11 (3.2) BS01 rna ? GO:0002181 ... P60405 26791911
    338479 5e7k:12 (3.2) BS01 rna ? GO:0003735 ... P80371 26791911
    338480 5e7k:15 (3.2) BS01 rna ? GO:0003729 ... P60488 26791911
    338481 5e7k:19 (3.2) BS01 rna ? GO:0002181 ... P60405 26791911
    338482 5e7k:19 (3.2) BS02 rna ? GO:0002181 ... P60405 26791911
    338483 5e7k:1A (3.2) BS01 rna ? GO:0000049 ... Q5SHN7 26791911
    338484 5e7k:1E (3.2) BS01 rna ? GO:0003735 ... P80371 26791911
    338485 5e7k:1I (3.2) BS01 rna ? GO:0000049 ... Q5SHN7 26791911
    338486 5e7k:21 (3.2) BS01 rna ? GO:0003735 ... Q5SHN8 26791911
    338487 5e7k:21 (3.2) BS02 MG ? GO:0003735 ... Q5SHN8 26791911
    338488 5e7k:22 (3.2) BS01 rna ? GO:0003676 ... P80372 26791911
    338489 5e7k:25 (3.2) BS01 rna ? GO:0003735 ... Q5SHP8 26791911
    338490 5e7k:25 (3.2) BS02 rna ? GO:0003735 ... Q5SHP8 26791911
    338491 5e7k:29 (3.2) BS01 rna ? GO:0003735 ... Q5SHN8 26791911
    338492 5e7k:29 (3.2) BS02 MG ? GO:0003735 ... Q5SHN8 26791911
    338493 5e7k:2A (3.2) BS01 rna ? GO:0003735 ... P80376 26791911
    338494 5e7k:2A (3.2) BS02 MG ? GO:0003735 ... P80376 26791911
    338495 5e7k:2E (3.2) BS01 rna ? GO:0003676 ... P80372 26791911
    338496 5e7k:2I (3.2) BS01 rna ? GO:0003735 ... P80376 26791911
    338497 5e7k:2I (3.2) BS02 MG ? GO:0003735 ... P80376 26791911
    338498 5e7k:31 (3.2) BS01 rna ? GO:0003735 ... Q5SHN9 26791911
    338499 5e7k:32 (3.2) BS01 rna ? GO:0003723 ... P80373 26791911
    338500 5e7k:32 (3.2) BS02 SF4 ? GO:0003723 ... P80373 26791911
    338501 5e7k:35 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ7 26791911
    338502 5e7k:39 (3.2) BS01 rna ? GO:0003735 ... Q5SHN9 26791911
    338503 5e7k:39 (3.2) BS02 MG ? GO:0003735 ... Q5SHN9 26791911
    338504 5e7k:3A (3.2) BS01 rna ? GO:0000049 ... Q5SHN3 26791911
    338505 5e7k:3E (3.2) BS01 rna ? GO:0003723 ... P80373 26791911
    338506 5e7k:3E (3.2) BS02 SF4 ? GO:0003723 ... P80373 26791911
    338507 5e7k:3I (3.2) BS01 rna ? GO:0000049 ... Q5SHN3 26791911
    338508 5e7k:3I (3.2) BS02 MG ? GO:0000049 ... Q5SHN3 26791911
    338509 5e7k:41 (3.2) BS01 rna ? GO:0000049 ... Q5SHQ0 26791911
    338510 5e7k:41 (3.2) BS02 rna ? GO:0000049 ... Q5SHQ0 26791911
    338511 5e7k:41 (3.2) BS03 rna ? GO:0000049 ... Q5SHQ0 26791911
    338512 5e7k:41 (3.2) BS04 MG ? GO:0000049 ... Q5SHQ0 26791911
    338513 5e7k:42 (3.2) BS01 rna ? GO:0003723 ... Q5SHQ5 26791911
    338514 5e7k:45 (3.2) BS01 rna ? GO:0000049 ... P60489 26791911
    338515 5e7k:45 (3.2) BS02 rna ? GO:0000049 ... P60489 26791911
    338516 5e7k:45 (3.2) BS03 rna ? GO:0000049 ... P60489 26791911
    338517 5e7k:49 (3.2) BS01 rna ? GO:0000049 ... Q5SHQ0 26791911
    338518 5e7k:49 (3.2) BS02 rna ? GO:0000049 ... Q5SHQ0 26791911
    338519 5e7k:49 (3.2) BS03 rna ? GO:0000049 ... Q5SHQ0 26791911
    338520 5e7k:4A (3.2) BS01 rna ? GO:0000049 ... P80377 26791911
    338521 5e7k:4E (3.2) BS01 rna ? GO:0003723 ... Q5SHQ5 26791911
    338522 5e7k:4I (3.2) BS01 rna ? GO:0000049 ... P80377 26791911
    338523 5e7k:51 (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338524 5e7k:52 (3.2) BS01 rna ? GO:0003735 ... Q5SLP8 26791911
    338525 5e7k:55 (3.2) BS01 rna ? GO:0003735 ... Q9Z9H5 26791911
    338526 5e7k:58 (3.2) BS01 rna ? GO:0003729 ... P60488 26791911
    338527 5e7k:59 (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338528 5e7k:5A (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338529 5e7k:5A (3.2) BS02 ZN N/A GO:0003735 ... N/A 26791911
    338530 5e7k:5E (3.2) BS01 rna ? GO:0003735 ... Q5SLP8 26791911
    338531 5e7k:5I (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338532 5e7k:5I (3.2) BS02 ZN N/A GO:0003735 ... N/A 26791911
    338533 5e7k:61 (3.2) BS01 rna ? GO:0003735 ... Q5SLQ1 26791911
    338534 5e7k:62 (3.2) BS01 rna ? GO:0000049 ... P17291 26791911
    338535 5e7k:62 (3.2) BS02 rna ? GO:0000049 ... P17291 26791911
    338536 5e7k:65 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ4 26791911
    338537 5e7k:65 (3.2) BS02 rna ? GO:0003735 ... Q5SHQ4 26791911
    338538 5e7k:68 (3.2) BS01 rna ? GO:0003735 ... Q5SHP8 26791911
    338539 5e7k:68 (3.2) BS02 rna ? GO:0003735 ... Q5SHP8 26791911
    338540 5e7k:69 (3.2) BS01 rna ? GO:0003735 ... Q5SLQ1 26791911
    338541 5e7k:69 (3.2) BS02 rna ? GO:0003735 ... Q5SLQ1 26791911
    338542 5e7k:6A (3.2) BS01 rna ? GO:0003735 ... Q5SJ76 26791911
    338543 5e7k:6A (3.2) BS02 rna ? GO:0003735 ... Q5SJ76 26791911
    338544 5e7k:6E (3.2) BS01 rna ? GO:0000049 ... P17291 26791911
    338545 5e7k:6E (3.2) BS02 rna ? GO:0000049 ... P17291 26791911
    338546 5e7k:6I (3.2) BS01 rna ? GO:0003735 ... Q5SJ76 26791911
    338547 5e7k:6I (3.2) BS02 rna ? GO:0003735 ... Q5SJ76 26791911
    338548 5e7k:71 (3.2) BS01 rna ? GO:0000049 ... Q5SLP7 26791911
    338549 5e7k:72 (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338550 5e7k:75 (3.2) BS01 rna ? GO:0003735 ... P60490 26791911
    338551 5e7k:75 (3.2) BS02 rna ? GO:0003735 ... P60490 26791911
    338552 5e7k:78 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ7 26791911
    338553 5e7k:79 (3.2) BS01 rna ? GO:0000049 ... Q5SLP7 26791911
    338554 5e7k:79 (3.2) BS02 rna ? GO:0000049 ... Q5SLP7 26791911
    338555 5e7k:7A (3.2) BS01 rna ? GO:0003735 ... Q5SJH3 26791911
    338556 5e7k:7E (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338557 5e7k:7I (3.2) BS01 rna ? GO:0003735 ... Q5SJH3 26791911
    338558 5e7k:82 (3.2) BS01 rna ? GO:0000049 ... P80374 26791911
    338559 5e7k:85 (3.2) BS01 rna ? GO:0000027 ... P60491 26791911
    338560 5e7k:88 (3.2) BS01 rna ? GO:0000049 ... P60489 26791911
    338561 5e7k:88 (3.2) BS02 rna ? GO:0000049 ... P60489 26791911
    338562 5e7k:88 (3.2) BS03 rna ? GO:0000049 ... P60489 26791911
    338563 5e7k:88 (3.2) BS04 MG ? GO:0000049 ... P60489 26791911
    338564 5e7k:88 (3.2) BS05 MG ? GO:0000049 ... P60489 26791911
    338565 5e7k:8A (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338566 5e7k:8E (3.2) BS01 rna ? GO:0000049 ... P80374 26791911
    338567 5e7k:8I (3.2) BS01 rna N/A GO:0003735 ... N/A 26791911
    338568 5e7k:95 (3.2) BS01 rna ? GO:0003723 ... P60492 26791911
    338569 5e7k:98 (3.2) BS01 rna ? GO:0003735 ... Q9Z9H5 26791911
    338570 5e7k:9A (3.2) BS01 rna ? GO:0003735 ... Q5SLQ0 26791911
    338571 5e7k:9I (3.2) BS01 rna ? GO:0003735 ... Q5SLQ0 26791911
    338572 5e7k:A5 (3.2) BS01 rna ? GO:0003735 ... Q5SHP3 26791911
    338573 5e7k:A8 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ4 26791911
    338574 5e7k:A8 (3.2) BS02 rna ? GO:0003735 ... Q5SHQ4 26791911
    338575 5e7k:AA (3.2) BS01 rna ? GO:0000028 ... Q5SHP2 26791911
    338576 5e7k:AI (3.2) BS01 rna ? GO:0000028 ... Q5SHP2 26791911
    338577 5e7k:B5 (3.2) BS01 rna ? GO:0003735 ... Q5SHP0 26791911
    338578 5e7k:B8 (3.2) BS01 rna ? GO:0003735 ... P60490 26791911
    338579 5e7k:B8 (3.2) BS02 rna ? GO:0003735 ... P60490 26791911
    338580 5e7k:BA (3.2) BS01 rna ? GO:0003723 ... P80380 26791911
    338581 5e7k:BI (3.2) BS01 rna ? GO:0003723 ... P80380 26791911
    338582 5e7k:C5 (3.2) BS01 rna ? GO:0003723 ... Q5SHP9 26791911
    338583 5e7k:C5 (3.2) BS02 MG ? GO:0003723 ... Q5SHP9 26791911
    338584 5e7k:C8 (3.2) BS01 rna ? GO:0000027 ... P60491 26791911
    338585 5e7k:D5 (3.2) BS01 rna ? GO:0003723 ... Q5SHZ1 26791911
    338586 5e7k:D8 (3.2) BS01 rna ? GO:0003723 ... P60492 26791911
    338587 5e7k:E5 (3.2) BS01 rna ? GO:0003735 ... P60493 26791911
    338588 5e7k:E5 (3.2) BS02 rna ? GO:0003735 ... P60493 26791911
    338589 5e7k:E5 (3.2) BS03 rna ? GO:0003735 ... P60493 26791911
    338590 5e7k:E8 (3.2) BS01 rna ? GO:0003735 ... Q5SHP3 26791911
    338591 5e7k:F5 (3.2) BS01 rna ? GO:0003735 ... P60494 26791911
    338592 5e7k:F8 (3.2) BS01 rna ? GO:0003735 ... Q5SHP0 26791911
    338593 5e7k:G5 (3.2) BS01 rna ? GO:0003735 ... Q5SHP6 26791911
    338594 5e7k:G8 (3.2) BS01 rna ? GO:0003723 ... Q5SHP9 26791911
    338595 5e7k:G8 (3.2) BS02 ZN ? GO:0003723 ... Q5SHP9 26791911
    338596 5e7k:H5 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ6 26791911
    338597 5e7k:H5 (3.2) BS02 rna ? GO:0003735 ... Q5SHQ6 26791911
    338598 5e7k:H8 (3.2) BS01 rna ? GO:0003723 ... Q5SHZ1 26791911
    338599 5e7k:I8 (3.2) BS01 rna ? GO:0003735 ... P60493 26791911
    338600 5e7k:I8 (3.2) BS02 rna ? GO:0003735 ... P60493 26791911

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).