SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    340001 5ef2:A (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340002 5ef2:B (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340003 5ef2:B (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340004 5ef2:C (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340005 5ef2:C (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340006 5ef2:D (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340007 5ef2:D (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340008 5ef2:E (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340009 5ef2:E (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340010 5ef2:F (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340011 5ef2:F (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340012 5ef2:G (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340013 5ef2:G (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340014 5ef2:H (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340015 5ef2:H (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340016 5ef2:I (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340017 5ef2:I (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340018 5ef2:J (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340019 5ef2:J (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340020 5ef2:K (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340021 5ef2:K (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340022 5ef2:L (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340023 5ef2:L (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340024 5ef2:L (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340025 5ef2:M (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340026 5ef2:M (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340027 5ef2:M (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340028 5ef2:N (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340029 5ef2:N (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340030 5ef2:N (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340031 5ef2:O (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340032 5ef2:O (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340033 5ef2:O (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340034 5ef2:P (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340035 5ef2:P (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340036 5ef2:P (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340037 5ef2:Q (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340038 5ef2:Q (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340039 5ef2:Q (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340040 5ef2:R (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340041 5ef2:R (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340042 5ef2:R (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340043 5ef2:S (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340044 5ef2:S (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340045 5ef2:S (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340046 5ef2:T (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340047 5ef2:T (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340048 5ef2:T (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340049 5ef2:U (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340050 5ef2:U (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340051 5ef2:U (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340052 5ef2:V (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340053 5ef2:V (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340054 5ef2:V (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340055 5ef3:A (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340056 5ef3:A (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340057 5ef3:B (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340058 5ef3:B (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340059 5ef3:C (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340060 5ef3:C (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340061 5ef3:D (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340062 5ef3:D (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340063 5ef3:E (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340064 5ef3:E (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340065 5ef3:F (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340066 5ef3:F (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340067 5ef3:G (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340068 5ef3:G (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340069 5ef3:H (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340070 5ef3:H (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340071 5ef3:I (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340072 5ef3:I (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340073 5ef3:J (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340074 5ef3:J (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340075 5ef3:K (1.98) BS01 TRP ? GO:0003723 ... Q9X6J6 27139628
    340076 5ef3:K (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340077 5ef3:L (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340078 5ef3:L (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340079 5ef3:L (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340080 5ef3:M (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340081 5ef3:M (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340082 5ef3:M (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340083 5ef3:N (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340084 5ef3:N (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340085 5ef3:N (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340086 5ef3:O (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340087 5ef3:O (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340088 5ef3:O (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340089 5ef3:P (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340090 5ef3:P (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340091 5ef3:P (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340092 5ef3:Q (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340093 5ef3:Q (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340094 5ef3:Q (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340095 5ef3:R (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340096 5ef3:R (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340097 5ef3:R (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340098 5ef3:S (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340099 5ef3:S (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340100 5ef3:S (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340101 5ef3:T (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340102 5ef3:T (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340103 5ef3:T (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340104 5ef3:U (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340105 5ef3:U (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340106 5ef3:U (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340107 5ef3:V (1.98) BS01 rna ? GO:0003723 ... Q9X6J6 27139628
    340108 5ef3:V (1.98) BS02 TRP ? GO:0003723 ... Q9X6J6 27139628
    340109 5ef3:V (1.98) BS03 TRP ? GO:0003723 ... Q9X6J6 27139628
    340110 5ef6:A (3.0) BS01 dna ? GO:0000981 ... Q92826 28473536
    340111 5ef6:A (3.0) BS02 dna ? GO:0000981 ... Q92826 28473536
    340112 5ef6:A (3.0) BS03 dna ? GO:0000981 ... Q92826 28473536
    340113 5ef6:B (3.0) BS01 dna ? GO:0000981 ... Q92826 28473536
    340114 5ef6:B (3.0) BS02 dna ? GO:0000981 ... Q92826 28473536
    340115 5ef6:B (3.0) BS03 dna ? GO:0000981 ... Q92826 28473536
    340116 5ef6:G (3.0) BS01 dna ? GO:0000981 ... Q92826 28473536
    340117 5ef6:G (3.0) BS02 dna ? GO:0000981 ... Q92826 28473536
    340118 5ef6:G (3.0) BS03 dna ? GO:0000981 ... Q92826 28473536
    340119 5ef6:J (3.0) BS01 dna ? GO:0000981 ... Q92826 28473536
    340120 5ef6:J (3.0) BS02 dna ? GO:0000981 ... Q92826 28473536
    340121 5ef6:J (3.0) BS03 dna ? GO:0000981 ... Q92826 28473536
    340122 5ef7:A (1.9) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340123 5ef7:A (1.9) BS02 5OJ 3.5.1.98 N/A F8W4B7 27454933 MOAD: Ki=1nM
    340124 5ef7:B (1.9) BS01 5OJ 3.5.1.98 N/A F8W4B7 27454933 MOAD: Ki=1nM
    340125 5ef7:B (1.9) BS02 ZN 3.5.1.98 N/A F8W4B7 27454933
    340126 5ef7:B (1.9) BS03 5OJ 3.5.1.98 N/A F8W4B7 27454933 MOAD: Ki=1nM
    340127 5ef8:A (2.6) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340128 5ef8:A (2.6) BS02 LBH 3.5.1.98 N/A F8W4B7 27454933
    340129 5ef8:B (2.6) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340130 5ef8:B (2.6) BS02 LBH 3.5.1.98 N/A F8W4B7 27454933
    340131 5efa:A (1.9) BS01 MGT ? N/A Q9QLL6 26559973 MOAD: Kd=14.7uM
    340132 5efb:D (2.543) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340133 5efb:D (2.543) BS02 5OK 3.5.1.98 N/A F8W4B7 27454933
    340134 5efc:A (1.9) BS01 GTP ? N/A Q9QLL6 26559973 MOAD: Kd=14.1uM
    340135 5efd:A (1.674) BS01 MG 3.2.1.8 GO:0004553 ... O30700 33570386
    340136 5efd:A (1.674) BS02 EDO 3.2.1.8 GO:0004553 ... O30700 33570386
    340137 5efd:A (1.674) BS03 EDO 3.2.1.8 GO:0004553 ... O30700 33570386
    340138 5efd:A (1.674) BS04 EDO 3.2.1.8 GO:0004553 ... O30700 33570386
    340139 5efd:B (1.674) BS01 MG 3.2.1.8 GO:0004553 ... O30700 33570386
    340140 5efd:B (1.674) BS02 EDO 3.2.1.8 GO:0004553 ... O30700 33570386
    340141 5efd:B (1.674) BS03 EDO 3.2.1.8 GO:0004553 ... O30700 33570386
    340142 5efd:B (1.674) BS04 EDO 3.2.1.8 GO:0004553 ... O30700 33570386
    340143 5efd:B (1.674) BS05 EDO 3.2.1.8 GO:0004553 ... O30700 33570386
    340144 5eff:A (2.23) BS01 MG 3.2.1.8 GO:0004553 ... O30700 N/A
    340145 5eff:B (2.23) BS01 MG 3.2.1.8 GO:0004553 ... O30700 N/A
    340146 5efg:A (2.25) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340147 5efg:D (2.25) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340148 5efh:A (2.162) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340149 5efh:A (2.162) BS02 FKS 3.5.1.98 N/A F8W4B7 27454933 MOAD: Ki=0.8uM
    340150 5efh:D (2.162) BS01 ZN 3.5.1.98 N/A F8W4B7 27454933
    340151 5efh:D (2.162) BS02 FKS 3.5.1.98 N/A F8W4B7 27454933 MOAD: Ki=0.8uM
    340152 5efi:A (1.8) BS01 peptide ? N/A P11609 27006394
    340153 5efi:A (1.8) BS02 FUC ? N/A P11609 27006394
    340154 5efj:D (1.73) BS01 peptide 3.5.1.98 N/A F8W4B7 27454933
    340155 5efj:D (1.73) BS02 ZN 3.5.1.98 N/A F8W4B7 27454933
    340156 5efk:B (1.82) BS01 peptide 3.5.1.98 N/A F8W4B7 27454933
    340157 5efk:B (1.82) BS02 ZN 3.5.1.98 N/A F8W4B7 27454933
    340158 5efk:B (1.82) BS03 MCM 3.5.1.98 N/A F8W4B7 27454933
    340159 5efn:A (1.804) BS01 peptide 3.5.1.98 N/A F8W4B7 27454933
    340160 5efn:A (1.804) BS02 ZN 3.5.1.98 N/A F8W4B7 27454933
    340161 5efn:B (1.804) BS01 peptide 3.5.1.98 N/A F8W4B7 27454933
    340162 5efn:B (1.804) BS02 ZN 3.5.1.98 N/A F8W4B7 27454933
    340163 5efn:B (1.804) BS03 MCM 3.5.1.98 N/A F8W4B7 27454933
    340164 5efo:A (1.63) BS01 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340165 5efo:B (1.63) BS01 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340166 5efo:C (1.63) BS01 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340167 5efo:C (1.63) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340168 5efo:D (1.63) BS01 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340169 5efo:D (1.63) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340170 5efo:E (1.63) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340171 5efo:F (1.63) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    340172 5efq:A (2.0) BS01 ADP 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q14004 26748711
    340173 5efq:A (2.0) BS02 AF3 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q14004 26748711
    340174 5efq:A (2.0) BS03 MG 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q14004 26748711
    340175 5efq:C (2.0) BS01 ADP 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q14004 26748711
    340176 5efq:C (2.0) BS02 AF3 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q14004 26748711
    340177 5efq:C (2.0) BS03 MG 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q14004 26748711
    340178 5eft:B (2.5) BS01 peptide ? N/A B6SCH3 N/A
    340179 5eft:D (2.5) BS01 peptide ? N/A B6SCH3 N/A
    340180 5eft:D (2.5) BS02 peptide ? N/A B6SCH3 N/A
    340181 5eft:D (2.5) BS03 peptide ? N/A B6SCH3 N/A
    340182 5eft:F (2.5) BS01 peptide ? N/A B6SCH3 N/A
    340183 5eft:H (2.5) BS01 peptide ? N/A B6SCH3 N/A
    340184 5eft:H (2.5) BS02 peptide ? N/A B6SCH3 N/A
    340185 5efu:A (2.8) BS01 FE2 1.13.11.20 GO:0005506 ... P21816 N/A
    340186 5efv:A (2.2) BS01 FE ? GO:0046872 ... Q8SDT4 27282779
    340187 5efv:B (2.2) BS01 FE ? GO:0046872 ... Q8SDT4 27282779
    340188 5efv:C (2.2) BS01 FE ? GO:0046872 ... Q8SDT4 27282779
    340189 5efw:A (2.1) BS01 FMN 2.7.11.1 N/A O49003 27427858
    340190 5eg0:A (3.101) BS01 dna ? GO:0003677 ... O14770 N/A
    340191 5eg0:A (3.101) BS02 dna ? GO:0003677 ... O14770 N/A
    340192 5eg0:B (3.101) BS01 dna ? GO:0000981 ... Q92826 N/A
    340193 5eg0:B (3.101) BS02 dna ? GO:0000981 ... Q92826 N/A
    340194 5eg1:A (3.42) BS01 ANP ? GO:0005524 ... Q9X2W0 27555327
    340195 5eg1:A (3.42) BS02 MG ? GO:0005524 ... Q9X2W0 27555327
    340196 5eg1:A (3.42) BS03 ANP ? GO:0005524 ... Q9X2W0 27555327
    340197 5eg1:B (3.42) BS01 ANP ? GO:0005524 ... Q9X2W0 27555327
    340198 5eg1:B (3.42) BS02 ANP ? GO:0005524 ... Q9X2W0 27555327
    340199 5eg1:B (3.42) BS03 MG ? GO:0005524 ... Q9X2W0 27555327
    340200 5eg1:B (3.42) BS04 P6L ? GO:0005524 ... Q9X2W0 27555327

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).